Nucleotide Global Alignment

Description

Query:
TRCN0000479117
Subject:
NM_001163419.1
Aligned Length:
1252
Identities:
1000
Gaps:
143

Alignment

Query    1  ATGTCTATTTCCTTGAGCTCTTTAATTTTGTTGCCAATTTGGATAAACATGGCACAAATCCAGCAGGGAGGTCC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGATGAAAAAGAAAAGACTACCGCACTGAAAGATTTATTATCTAGGATAGATTTGGATGAACTAATGAAAAAAG  148
                                                                            ||||||||.|
Sbjct    1  ----------------------------------------------------------------ATGAAAAAGG  10

Query  149  ATGAACCGCCTCTTGATTTTCCTGATACCCTGGAAGGATTTGAATATGCTTTTAATGAAAAGGGACAGTTAAGA  222
            |.|||||.|||.||||||||||.|||||.||||||||.||||||||||||||||||||||||||.|||||||||
Sbjct   11  ACGAACCACCTTTTGATTTTCCAGATACACTGGAAGGCTTTGAATATGCTTTTAATGAAAAGGGGCAGTTAAGA  84

Query  223  CACATAAAAACTGGGGAACCATTTGTTTTTAACTACCGGGAAGATTTACACAGATGGAACCAGAAAAGATACGA  296
            ||||||||||||||||||||||||||||||||||||||.|||||.||||||||.|||||||||||||||||.||
Sbjct   85  CACATAAAAACTGGGGAACCATTTGTTTTTAACTACCGAGAAGACTTACACAGGTGGAACCAGAAAAGATATGA  158

Query  297  GGCTCTAGGAGAGATCATCACGAAG-TATGTATATGAGCTCCTGGAAAAGGATTGTAATTTGAAAAAAGTATCT  369
            .|||||.||.||||||||||| ||| |||||.||||||||||||||||..||.|||||||||||||||.|.|||
Sbjct  159  AGCTCTGGGCGAGATCATCAC-AAGATATGTTTATGAGCTCCTGGAAAGTGACTGTAATTTGAAAAAAATCTCT  231

Query  370  ATTCCAGTAGATGCCACTGAGAGTGAACCAAAGAGTTTTATCTTTATGAGTGAGGATGCTTTGACAAATCCACA  443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  232  ATTCCAGTAGATGCCACTGAGAGTGAACCAAAGAGTTTTATCTTTATGAGTGAGGATGCTTTGACAAATCCACA  305

Query  444  GAAACTGATGGTTTTAATTCATGGTAGTGGTGTTGTCAGGGCAGGGCAGTGGGCTAGAAGACTTATTATAAATG  517
            |||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||.||||
Sbjct  306  GAAACTGATGGTTTTAATTCATGGTAGTGGTGTTGTCAGGGCAGGTCAGTGGGCTAGAAGGCTTATTATTAATG  379

Query  518  AAGATCTGGACAGTGGCACACAGATACCGTTTATTAAAAGAGCTGTGGCTGAAGGATATGGAGTAATAGTACTA  591
            ||||||||||||||||||||||||||||.||||||||.||||||.|||.||||||.||||||||.||.||.||.
Sbjct  380  AAGATCTGGACAGTGGCACACAGATACCTTTTATTAAGAGAGCTATGGATGAAGGGTATGGAGTCATCGTCCTG  453

Query  592  AATCCCAATGAAAACTATATTGAAGTAGAAAAGCCGAAGATACACGTACAGTCATCA---TCTGATAGTTCAGA  662
            ||.||.||||||||||||||.|||||.|||||||.|||.||.||...||||||||||   ||||||.||.||||
Sbjct  454  AACCCAAATGAAAACTATATAGAAGTGGAAAAGCAGAAAATGCATAAACAGTCATCATCTTCTGATGGTACAGA  527

Query  663  TGAACCAGCAGAAAAACGGGAAAGAAAAGATAAAGTTTCTAAAGAAACAAAGAAGCGACGTGATTTCTATGAGA  736
            |||.|||||||..||.||||||||.|.||||||.||.||.||.||||||||||||||.||||||||||||||||
Sbjct  528  TGAGCCAGCAGGGAAGCGGGAAAGGAGAGATAAGGTCTCCAAGGAAACAAAGAAGCGTCGTGATTTCTATGAGA  601

Query  737  AGTATCGTAACCCCCAAAGAGAAAAAGAAATGATGCAATTGTATATCAGAGAAAATGGTTCTCCTGAAGAACAT  810
            ||||.||.|||||.||||..||.||||||||||||||.||||.||||||.||||||||||||||||||||.|||
Sbjct  602  AGTACCGCAACCCTCAAAAGGAGAAAGAAATGATGCAGTTGTTTATCAGGGAAAATGGTTCTCCTGAAGAGCAT  675

Query  811  GCAATCTATGTTTGGGATCATTTCATAGCTCAGGCTGCTGCTGAGAATGTGTTTTTCGTTGCTCACAGCTATGG  884
            ||..|||||||.|||||.|||||||||||.|||||||||||||||||||||||.||.||.|||||.||||||||
Sbjct  676  GCGGTCTATGTGTGGGACCATTTCATAGCCCAGGCTGCTGCTGAGAATGTGTTCTTTGTGGCTCATAGCTATGG  749

Query  885  AGGACTTGCTTTTGTTGAACTGATGATTCAACGAGAAGCCGATGTAAAAAATAAGGTAACTGCTGTGGCATTGA  958
            |||||||||||||||||||||||||||||||||||||||.||||||||||.||||||.||||||||||||||||
Sbjct  750  AGGACTTGCTTTTGTTGAACTGATGATTCAACGAGAAGCAGATGTAAAAAGTAAGGTGACTGCTGTGGCATTGA  823

Query  959  CAGACTCTGTTCACAATGTGTGGCATCAAGAAGCTGGCAAAACGATTCGAGAATGGATGAGAGAGAACTGTTGT  1032
            |||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||
Sbjct  824  CAGACTCTGTTCACAATGTGTGGCATCAAGAAGCTGGCAAAACCATCCGAGAATGGATGAGAGAGAACTGTTGT  897

Query 1033  AATTGGGTCTCTAGCTCAGAACCATTAGACACATCAGTGGAGTCCATGCTACCTGATTGCCCCCGGGTCTCAGC  1106
            ||.||||||||.|||||||||||||||||.|||||.|||||.||||||||.|||||.||.|||.|.||.||.||
Sbjct  898  AACTGGGTCTCCAGCTCAGAACCATTAGATACATCGGTGGAATCCATGCTGCCTGACTGTCCCAGAGTGTCTGC  971

Query 1107  AGGCACCGACCGTCACGAGCTAACTTCCTGGAAGAGCTTTCCGTCTATTTTCAAATTCTTTACCGAAGCCTCAG  1180
            |||||||||||||||||||||.|||||||||||||||||.||||||||.|||||.|||||..|.||||||||.|
Sbjct  972  AGGCACCGACCGTCACGAGCTCACTTCCTGGAAGAGCTTCCCGTCTATCTTCAAGTTCTTCGCGGAAGCCTCGG  1045

Query 1181  AGGCCAAGACCAGCTCCCTGAAGCCGGCTGTGACGCGCCGCTCCCACCGCATCAAGCACGAAGAGCTG  1248
            |||||||||.||||||.|.|||||||||..|||||||.|||||.|||||.|||||||||||.||||||
Sbjct 1046  AGGCCAAGAGCAGCTCGCAGAAGCCGGCCCTGACGCGGCGCTCGCACCGGATCAAGCACGAGGAGCTG  1113

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