Nucleotide Global Alignment
Description
- Query:
- TRCN0000479119
- Subject:
- XR_001743194.2
- Aligned Length:
- 4717
- Identities:
- 399
- Gaps:
- 4318
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAAGCGCCGGGCGGGGAGGAGAGAAGGAGGAGAGACTTGGAAACTCCGACTGCAAATAATAAAGAAATTGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACAATACATTAATATACCATAACACTAAAAAGAGCAGGAGCGAGAGATGAGAAAGGGAATCCAGCCCGCTCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGCAGTACCTGGTGACCGCCGGGGGTGGGGAGGGGGCGGCTGTCGTCGCCGCCGCCGCTGCAGCCTCCATGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAAAAGGGCACTGCTAGCCAGCCCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGTACATCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGATCCTCACCACGAACACTTCCACCACCTCCTGTTCCTCCTCCCTCCAAAGCGGCGCCGTAGCCGCCGGCCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCCTCCCCAGTGCCCCCGGCGCGGAGCAGACCGCCGGCAGCCTCCTCTACACCACGCCGCACGGACCCTCCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGAGCCGGGCTGCTGCAGCAGCCACCAGCGCTGGGACGCGGCGGCAGCGGCGGCGGCGGCGGCCCTCCGGCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCGAAGGCTGGAGCTAGGAGAAAGCGGTCATCAGTACCTCTCAGATGGTTTAAAAACCCCCAAGGGCAAAGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAGCTGCACTACGAAGTCCAGATAGTCCAAAAACTCCAAAATCTCCCTCAGAAAAAACGCGGTATGATACGTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTTGGTCTGCTCACCAAGAAGTTCATTCAGCTCCTGAGCCAGTCACCCGATGGGGTATTGGATTTGAACAAGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGCAGAAGTGCTAAAAGTGCAAAAGAGAAGGATTTATGATATCACCAACGTTCTGGAAGGCATCCACCTCATT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGAAGAAGTCTAAAAACAACGTCCAATGGATGGGCTGCAGTCTGTCTGAGGATGGGGGCATGCTGGCCCAGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCAAGGCCTGTCAAAAGAAGTGACCGAGCTCAGTCAGGAAGAGAAGAAATTAGATGAACTGATCCAAAGCTGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCCTGGACCTCAAACTGTTAACCGAGGATTCAGAGAATCAAAGATATCCTTTGTGCCGCCAGTTCTCTGGGGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCTACAAATACATTTGGCAAGTACCCAAGGGCCCATTGAGGTTTACTTATGTCCAGAAGAGACTGAAACACACA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTCCAATGAAAACAAACAACCAAGACCACAATGGGAATATCCCTAAACCCGCTTCCAAAGACTTGGCTTCAACC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACTCAGGACATAGCGATTGCTCAGTTTCTATGGGAAACCTTTCTCCTCTGGCCTCCCCAGCCAACCTCTTACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAGACTGAGGACCAAATTCCTTCCAACCTAGAAGGACCGTTTGTGAACTTACTGCCTCCCCTGCTGCAAGAGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACTATCTCCTGAGCCTCGGGGAGGAGGAAGGCATCAGCGATCTCTTCGATGCTTACGATTTGGAAAAGCTCCCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTGGTGGAAGACTTCATGTGTAGTTGATTATGCTTCGTGTGAACTCTCCTTAAAAACCGATATTTTTTTATCAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGAACCAGAACATCTGTCATGCAGTGTTGTCCCTTCCTACCTTCTTCCTCCAAGAGAGTATCATGAAGTAAACT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACAAACTTCAGAAGAAAGCTGACATTTTAATGAATTTTTTAAAAAATTAATAAACAAATTGTCTAAACGCACAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTGCAGGCTCCCTTGGGAAAGCCCTGCTTTGCTCCAGGCTCCAAGATCTCCTGGCTAAGTCAGCAAGTGAGAAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATGTGCAATCAGGTGTCTCTCACCCCGAATTGTCCTTCCTCCTTCCTCCCCGGATTGGCTTGCTGTGCCTGACG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GATGGGCTGTAGAATGGGGTCTGGCCACCTGGCCTGCTGGGAAACAGCAATCTTCCTTAATAGCATTTCAAGCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTGCCTTCTCCGCAGAATGCATGTCTTTGAGGTCTGCTAATATGGAATGGAACTGCAGCAAATGCAAACTTGAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTCATGCAAAAGTATGAAATGGATTTCTTCAGCTCTTCTTAGGAATATTTAAATTACTGTCATAATTCAGTTTA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGCTATGAACTGTGTGTCCCAGTAGGAGGTCAAGAAAACCTCCACAGCCTTCTGGATGAAGAACCTGTTTTCAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATATACTTGTTGCAGATACAGAAGACTAGTAGAGTTCTGCCACTCTAAGCTGTTGTGGATTTTCCTGTCTCCAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAACCACTCCCATTCCCCCGTCCCCAATGTGTTTGTGAGTTTCCAGTTGATTTGTAGCAAATGCCTACTTAGTT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CTTTGTGGATTGTTCTAGACTTTTAATTTTTTTAGCTGCCATTTAAGCATTCCTGTGGCACCCATCACCATTTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AATTTAATTGTTTACTTTGAAGCGGTTTTTGCAAATTCATATTACTTAAGCAGAGGGAGAGAACCTCTACTGAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CAGAGCATCTAAACCTGTGTGATCTAAGGTTTATCAGCCTCTGCAAGGAGCTTTGTCCCATCGTGCTTCCATTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCAGGAGGGGGAGCTTGGAGCGAGTCAGTCCTGGGGCTTGCTGACATGGGTGGCCCATTGGAAAGGAGAACCAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTCAGATGATGTAACAGCCCCAAGGAGCAGCAGGCATGGGTCCCTCCATCCTTGGGCTTCCCGGGCCCCTGTGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAGGGGAAAGGGCTCTCTTACACCGCACTCAGGGAGACCACTTCTCAGGATGGGGTCAGATGGAGAGACCTCTA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GGGAGAAAGACATCCCCATTGTGTGAGTGGCATTTCCTTAAGCTGGCAGGAACAGGGAGCAGCCCTGTGTCGGG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGCTGGAATAGTTCTGGCCAGACCCCGTTCCCCTTCCTCTATGAAGGAATAAGTTGGACCAAGGGAAGTCGGGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACGTAAAAAATGAAGCAAAACAATGCCAGGGTGTCTCCCGCTTTACTCTTCAGGAATGGTGTCCCAAGTTGGAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCTTTGTGTCAGCTGCAAATCCTACCAGTTATGTCCAAGAATGGCTTTCCCTCGGGCAGGTGGCAGCGGCCATC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TCCCACTGGGAATATGGCGTAGTATCTCCGGTCCATTCCTTGGATGCTAAGGACTGCGGGAATGAGGGAGTCAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATAAAGAACAAACCTCGAAACGAACAGTTAAATTGAAATGCTATGTGCCTGACCCAATGGTAGGCACATAGTAG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GCACTCAACTCATATGTTTAATTGAATTGAAAATATCCCTTAGGAAAAAAAAAAAACACACAAAAAACCACAAG 3182
Query 1 -------------------------------------ATGCAAAGTGGTGGTGGGGTCAAGACAGATGACACCA 37
|||||||||||||||||||||||||||||||||||||
Sbjct 3183 AGCCCCAGCCAGTTTACTCCAGGTAGATTTCCACAATATGCAAAGTGGTGGTGGGGTCAAGACAGATGACACCA 3256
Query 38 GCACTTTAAACTCTTTGTGTGGGTATGCGTGGGTGTATGTTTGGGAAGAAAAACAAAGGTGCAGACTATCTTCC 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 GCACTTTAAACTCTTTGTGTGGGTATGCGTGGGTGTATGTTTGGGAAGAAAAACAAAGGTGCAGACTATCTTCC 3330
Query 112 TTTTTTTCTTCTTCAGCCTCCATCCCTGGCCTCCTCCCCTCACACACACTGGACTTGGTACAAAATGTCGGTGT 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 TTTTTTTCTTCTTCAGCCTCCATCCCTGGCCTCCTCCCCTCACACACACTGGACTTGGTACAAAATGTCGGTGT 3404
Query 186 GGTCCTAGATGAAGCATTGGGGTGGGGGAGGGAGAGGGAGCTTTGTGTTAAGTGCCTACTGGAAATGCACTGTG 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 GGTCCTAGATGAAGCATTGGGGTGGGGGAGGGAGAGGGAGCTTTGTGTTAAGTGCCTACTGGAAATGCACTGTG 3478
Query 260 GGGTTTTTTCCTGTATGGGAAACCATTTATGCCAAGCTTTTCCCCATTTCCCATATTTATCTCATCTGGTTAGC 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 GGGTTTTTTCCTGTATGGGAAACCATTTATGCCAAGCTTTTCCCCATTTCCCATATTTATCTCATCTGGTTAGC 3552
Query 334 TGCCTCTGCTTCCAGCTTTGTGTAATTCTCTTTGCCAGCTGCACAAAGCTGATTTTTTCCAAAGTC-------- 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 TGCCTCTGCTTCCAGCTTTGTGTAATTCTCTTTGCCAGCTGCACAAAGCTGATTTTTTCCAAAGTCTAAAGACT 3626
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3627 GAGCTCACCTGGCTAGATTGTTGTGTGTTTTGTTGAATTTTTTCATAATGTAATGCCGTATTTATTGTTTTTAA 3700
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3701 AATGAAAGGAATACTAATAAGTCTTAAAAGTTCCTTCATGCATAAGATTTTTTTCCAGTTACTGGGTTTAACTG 3774
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3775 GTGTACATTAATTAGATGTCCATACTGTATTTTGTTTGCATTAAGTAATTTTCTTTTTGACTTAGTATCCGGCA 3848
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3849 CACAAAGTGGGTTAGTACTACAGTATTTGCGTTACTTTAAGTACTAAGTATGCAGGTTTCCTGGTACCATTGAG 3922
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3923 TTGCTGCTATTAAAGCTCACACACGAAATGGCTAAAAGTTACAAGTGTGCAAATTATGACTGCGTGAGCCTTAG 3996
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3997 AAAATAAAATGTATAAAGGGCAACACATGAGCTGTCAAACAGTGTTAGGAGTGTGTTTATATGTACAGAGTTGT 4070
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4071 GCATAGCAATCGTTTTATTTAAGTTGATATGTAGTCTACTCACATTTTCATTATTTAGCAATTTTGTACAAAAA 4144
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4145 TAGCAATTAATTTGTAAACACTGCCAGAATACTTTCTAGCTGCTTTGTAATTTTTTAAGAGTGTTATTTTGTTT 4218
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4219 TTGTTTTTCTGTTCTTTGTTGTGGCTCTTGTTTTCATTTTTGTTGTACGTGTAGATCTGTAAATAAAATTGCAG 4292
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4293 TATTTAAAGCTTAAGCTTTCAGGAAAAAGAAAATAAGAATTCAGTGTGTGCATGACAACTCGTGTGTATGAGAA 4366
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4367 GGAGGGATATGAAGGAAGATGGCTTGCAGAGTAAGTCGGGTGGCAATTGTCAGGGTGTGGGAATTTCTTTTCCT 4440
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4441 ACGGGGTACGTGATTTTGTAAAAAGGAAGTATTTCTCCCAAAATTGGGAGTAGGCAAACTACTAATCAGTTTAG 4514
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4515 CTTTGTGTTGTATGCTAGTTTAAAAAAGAAAATATGTAATATAATGTAAAAAAAAACAAAAAAAAGCTTTTATG 4588
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4589 ATGGATTTTGTAAATAGATTTGTTACAGGGTGACCTGTTCTCTAGCTGTGATCTTACCACTTCAAATGGGTGTA 4662
Query 400 ------------------------------------------------------- 399
Sbjct 4663 ATTTGAATAAATTTTGTATGGTAAAGGATCAATAAAATGATTTTTTTTAAGAGTT 4717
