Nucleotide Global Alignment

Description

Query:
TRCN0000479119
Subject:
XR_001743195.2
Aligned Length:
4769
Identities:
399
Gaps:
4370

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CGGAAGCGCCGGGCGGGGAGGAGAGAAGGAGGAGAGACTTGGAAACTCCGACTGCAAATAATAAAGAAATTGAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AACAATACATTAATATACCATAACACTAAAAAGAGCAGGAGCGAGAGATGAGAAAGGGAATCCAGCCCGCTCTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAGCAGTACCTGGTGACCGCCGGGGGTGGGGAGGGGGCGGCTGTCGTCGCCGCCGCCGCTGCAGCCTCCATGGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAAAAGGGCACTGCTAGCCAGCCCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGTACATCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGATCCTCACCACGAACACTTCCACCACCTCCTGTTCCTCCTCCCTCCAAAGCGGCGCCGTAGCCGCCGGCCCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTCCTCCCCAGTGCCCCCGGCGCGGAGCAGACCGCCGGCAGCCTCCTCTACACCACGCCGCACGGACCCTCCAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CAGAGCCGGGCTGCTGCAGCAGCCACCAGCGCTGGGACGCGGCGGCAGCGGCGGCGGCGGCGGCCCTCCGGCAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGCGAAGGCTGGAGCTAGGAGAAAGCGGTCATCAGTACCTCTCAGATGGTTTAAAAACCCCCAAGGGCAAAGGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGAGCTGCACTACGAAGTCCAGATAGTCCAAAAACTCCAAAATCTCCCTCAGAAAAAACGCGGTATGATACGTC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TCTTGGTCTGCTCACCAAGAAGTTCATTCAGCTCCTGAGCCAGTCACCCGATGGGGTATTGGATTTGAACAAGG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CAGCAGAAGTGCTAAAAGTGCAAAAGAGAAGGATTTATGATATCACCAACGTTCTGGAAGGCATCCACCTCATT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAGAAGAAGTCTAAAAACAACGTCCAATGGATGGGCTGCAGTCTGTCTGAGGATGGGGGCATGCTGGCCCAGTG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TCAAGGCCTGTCAAAAGAAGTGACCGAGCTCAGTCAGGAAGAGAAGAAATTAGATGAACTGATCCAAAGCTGCA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCCTGGACCTCAAACTGTTAACCGAGGATTCAGAGAATCAAAGATATCCTTTGTGCCGCCAGTTCTCTGGGGGT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TAGTGCTTCCTAGACTATTTCCAGAGTTGACAATCTGACTTATGCACAAGAGCCTACAAATACATTTGGCAAGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ACCCAAGGGCCCATTGAGGTTTACTTATGTCCAGAAGAGACTGAAACACACAGTCCAATGAAAACAAACAACCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGACCACAATGGGAATATCCCTAAACCCGCTTCCAAAGACTTGGCTTCAACCAACTCAGGACATAGCGATTGCT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CAGTTTCTATGGGAAACCTTTCTCCTCTGGCCTCCCCAGCCAACCTCTTACAGCAGACTGAGGACCAAATTCCT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TCCAACCTAGAAGGACCGTTTGTGAACTTACTGCCTCCCCTGCTGCAAGAGGACTATCTCCTGAGCCTCGGGGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGAGGAAGGCATCAGCGATCTCTTCGATGCTTACGATTTGGAAAAGCTCCCACTGGTGGAAGACTTCATGTGTA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTTGATTATGCTTCGTGTGAACTCTCCTTAAAAACCGATATTTTTTTATCATGGAACCAGAACATCTGTCATGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGTGTTGTCCCTTCCTACCTTCTTCCTCCAAGAGAGTATCATGAAGTAAACTACAAACTTCAGAAGAAAGCTGA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CATTTTAATGAATTTTTTAAAAAATTAATAAACAAATTGTCTAAACGCACAGTTGCAGGCTCCCTTGGGAAAGC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CCTGCTTTGCTCCAGGCTCCAAGATCTCCTGGCTAAGTCAGCAAGTGAGAAAATGTGCAATCAGGTGTCTCTCA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CCCCGAATTGTCCTTCCTCCTTCCTCCCCGGATTGGCTTGCTGTGCCTGACGGATGGGCTGTAGAATGGGGTCT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGCCACCTGGCCTGCTGGGAAACAGCAATCTTCCTTAATAGCATTTCAAGCCGTGCCTTCTCCGCAGAATGCAT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GTCTTTGAGGTCTGCTAATATGGAATGGAACTGCAGCAAATGCAAACTTGAAGTCATGCAAAAGTATGAAATGG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ATTTCTTCAGCTCTTCTTAGGAATATTTAAATTACTGTCATAATTCAGTTTAAGCTATGAACTGTGTGTCCCAG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TAGGAGGTCAAGAAAACCTCCACAGCCTTCTGGATGAAGAACCTGTTTTCAAATATACTTGTTGCAGATACAGA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AGACTAGTAGAGTTCTGCCACTCTAAGCTGTTGTGGATTTTCCTGTCTCCATGAACCACTCCCATTCCCCCGTC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CCCAATGTGTTTGTGAGTTTCCAGTTGATTTGTAGCAAATGCCTACTTAGTTCTTTGTGGATTGTTCTAGACTT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TTAATTTTTTTAGCTGCCATTTAAGCATTCCTGTGGCACCCATCACCATTTCAATTTAATTGTTTACTTTGAAG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CGGTTTTTGCAAATTCATATTACTTAAGCAGAGGGAGAGAACCTCTACTGATCAGAGCATCTAAACCTGTGTGA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TCTAAGGTTTATCAGCCTCTGCAAGGAGCTTTGTCCCATCGTGCTTCCATTCCCAGGAGGGGGAGCTTGGAGCG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AGTCAGTCCTGGGGCTTGCTGACATGGGTGGCCCATTGGAAAGGAGAACCAGGTCAGATGATGTAACAGCCCCA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AGGAGCAGCAGGCATGGGTCCCTCCATCCTTGGGCTTCCCGGGCCCCTGTGACAGGGGAAAGGGCTCTCTTACA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CCGCACTCAGGGAGACCACTTCTCAGGATGGGGTCAGATGGAGAGACCTCTAGGGAGAAAGACATCCCCATTGT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GTGAGTGGCATTTCCTTAAGCTGGCAGGAACAGGGAGCAGCCCTGTGTCGGGGGCTGGAATAGTTCTGGCCAGA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  CCCCGTTCCCCTTCCTCTATGAAGGAATAAGTTGGACCAAGGGAAGTCGGGGACGTAAAAAATGAAGCAAAACA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  ATGCCAGGGTGTCTCCCGCTTTACTCTTCAGGAATGGTGTCCCAAGTTGGAGGCTTTGTGTCAGCTGCAAATCC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TACCAGTTATGTCCAAGAATGGCTTTCCCTCGGGCAGGTGGCAGCGGCCATCTCCCACTGGGAATATGGCGTAG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TATCTCCGGTCCATTCCTTGGATGCTAAGGACTGCGGGAATGAGGGAGTCAGATAAAGAACAAACCTCGAAACG  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  AACAGTTAAATTGAAATGCTATGTGCCTGACCCAATGGTAGGCACATAGTAGGCACTCAACTCATATGTTTAAT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TGAATTGAAAATATCCCTTAGGAAAAAAAAAAAACACACAAAAAACCACAAGAGCCCCAGCCAGTTTACTCCAG  3256

Query    1  ---------------ATGCAAAGTGGTGGTGGGGTCAAGACAGATGACACCAGCACTTTAAACTCTTTGTGTGG  59
                           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257  GTAGATTTCCACAATATGCAAAGTGGTGGTGGGGTCAAGACAGATGACACCAGCACTTTAAACTCTTTGTGTGG  3330

Query   60  GTATGCGTGGGTGTATGTTTGGGAAGAAAAACAAAGGTGCAGACTATCTTCCTTTTTTTCTTCTTCAGCCTCCA  133
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331  GTATGCGTGGGTGTATGTTTGGGAAGAAAAACAAAGGTGCAGACTATCTTCCTTTTTTTCTTCTTCAGCCTCCA  3404

Query  134  TCCCTGGCCTCCTCCCCTCACACACACTGGACTTGGTACAAAATGTCGGTGTGGTCCTAGATGAAGCATTGGGG  207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405  TCCCTGGCCTCCTCCCCTCACACACACTGGACTTGGTACAAAATGTCGGTGTGGTCCTAGATGAAGCATTGGGG  3478

Query  208  TGGGGGAGGGAGAGGGAGCTTTGTGTTAAGTGCCTACTGGAAATGCACTGTGGGGTTTTTTCCTGTATGGGAAA  281
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479  TGGGGGAGGGAGAGGGAGCTTTGTGTTAAGTGCCTACTGGAAATGCACTGTGGGGTTTTTTCCTGTATGGGAAA  3552

Query  282  CCATTTATGCCAAGCTTTTCCCCATTTCCCATATTTATCTCATCTGGTTAGCTGCCTCTGCTTCCAGCTTTGTG  355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553  CCATTTATGCCAAGCTTTTCCCCATTTCCCATATTTATCTCATCTGGTTAGCTGCCTCTGCTTCCAGCTTTGTG  3626

Query  356  TAATTCTCTTTGCCAGCTGCACAAAGCTGATTTTTTCCAAAGTC------------------------------  399
            ||||||||||||||||||||||||||||||||||||||||||||                              
Sbjct 3627  TAATTCTCTTTGCCAGCTGCACAAAGCTGATTTTTTCCAAAGTCTAAAGACTGAGCTCACCTGGCTAGATTGTT  3700

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3701  GTGTGTTTTGTTGAATTTTTTCATAATGTAATGCCGTATTTATTGTTTTTAAAATGAAAGGAATACTAATAAGT  3774

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3775  CTTAAAAGTTCCTTCATGCATAAGATTTTTTTCCAGTTACTGGGTTTAACTGGTGTACATTAATTAGATGTCCA  3848

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3849  TACTGTATTTTGTTTGCATTAAGTAATTTTCTTTTTGACTTAGTATCCGGCACACAAAGTGGGTTAGTACTACA  3922

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3923  GTATTTGCGTTACTTTAAGTACTAAGTATGCAGGTTTCCTGGTACCATTGAGTTGCTGCTATTAAAGCTCACAC  3996

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 3997  ACGAAATGGCTAAAAGTTACAAGTGTGCAAATTATGACTGCGTGAGCCTTAGAAAATAAAATGTATAAAGGGCA  4070

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 4071  ACACATGAGCTGTCAAACAGTGTTAGGAGTGTGTTTATATGTACAGAGTTGTGCATAGCAATCGTTTTATTTAA  4144

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 4145  GTTGATATGTAGTCTACTCACATTTTCATTATTTAGCAATTTTGTACAAAAATAGCAATTAATTTGTAAACACT  4218

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 4219  GCCAGAATACTTTCTAGCTGCTTTGTAATTTTTTAAGAGTGTTATTTTGTTTTTGTTTTTCTGTTCTTTGTTGT  4292

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 4293  GGCTCTTGTTTTCATTTTTGTTGTACGTGTAGATCTGTAAATAAAATTGCAGTATTTAAAGCTTAAGCTTTCAG  4366

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 4367  GAAAAAGAAAATAAGAATTCAGTGTGTGCATGACAACTCGTGTGTATGAGAAGGAGGGATATGAAGGAAGATGG  4440

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 4441  CTTGCAGAGTAAGTCGGGTGGCAATTGTCAGGGTGTGGGAATTTCTTTTCCTACGGGGTACGTGATTTTGTAAA  4514

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 4515  AAGGAAGTATTTCTCCCAAAATTGGGAGTAGGCAAACTACTAATCAGTTTAGCTTTGTGTTGTATGCTAGTTTA  4588

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 4589  AAAAAGAAAATATGTAATATAATGTAAAAAAAAACAAAAAAAAGCTTTTATGATGGATTTTGTAAATAGATTTG  4662

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 4663  TTACAGGGTGACCTGTTCTCTAGCTGTGATCTTACCACTTCAAATGGGTGTAATTTGAATAAATTTTGTATGGT  4736

Query  400  ---------------------------------  399
                                             
Sbjct 4737  AAAGGATCAATAAAATGATTTTTTTTAAGAGTT  4769

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