Nucleotide Global Alignment
Description
- Query:
- TRCN0000479140
- Subject:
- NM_001258250.1
- Aligned Length:
- 3656
- Identities:
- 397
- Gaps:
- 3220
Alignment
Query 1 ATGAAATCGTGCGCAGTGTCGCTCACTACCGCCGCTGTTGCCTTCGGTGATGAGGCAAAGAAAATGGCGGAAGG 74
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAATCCTGCGCAGTGTCGCTCACTACCGCCGCTGTTGCCTTCGGTGATGAGGCAAAGAAAATGGCGGAAGG 74
Query 75 AAAAGCGAGCCGCGAGAGTGAAGAGGAGTCTGTTAGCCTGACAGTCGAGGAAAGGGAGGCGCTTGGTGGCATGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AAAAGCGAGCCGCGAGAGTGAAGAGGAGTCTGTTAGCCTGACAGTCGAGGAAAGGGAGGCGCTTGGTGGCATGG 148
Query 149 ACAGCCGTCTCTTCGGGTTCGTGAGGCTTCATGAAGATGGCGCCAGAACGAAGACCCTACTAGGCAAGG----- 217
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACAGCCGTCTCTTCGGGTTCGTGAGGCTTCATGAAGATGGCGCCAGAACGAAGACCCTACTAGGCAAGGCTGTT 222
Query 218 ----------------------TAAAAGC--AACCAGACGCAAAG------------TCTTT---------GGT 246
||||||| | |.|.|||| ||||| |||
Sbjct 223 CGCTGCTACGAATCTTTAATCTTAAAAGCTGA-----AGGAAAAGTGGAGTCTGACTTCTTTTGCCAATTAGGT 291
Query 247 CCGCACTT------------------------------------TGC------------------TCTACCAAG 266
||||| ||| |.||| ||
Sbjct 292 ---CACTTCAACCTCTTGTTGGAAGATTATTCAAAAGCATTATCTGCATATCAGAGATATTACAGTTTAC--AG 360
Query 267 GC----------------CCCGCGTTCCT-TACCGCC----------------------CA------------- 288
|| .|.|||||..| ||..||| ||
Sbjct 361 GCTGACTACTGGAAGAATGCTGCGTTTTTATATGGCCTTGGTTTGGTCTACTTCTACTACAATGCATTTCATTG 434
Query 289 -GCCAGTA------------------TTTATTTTG------GCTCTGCTCCATGGCCAAGG------------- 324
||.|.|| |||||.||| |||.|..||.| |||||||
Sbjct 435 GGCAATTAAAGCATTTCAAGATGTCCTTTATGTTGACCCCAGCTTTTGTCGA--GCCAAGGAAATTCATTTACG 506
Query 325 ----GGTCGGA-----AAAGTG------------------------------TTTC---TTGCCT---TTG-CT 352
||.|..| |||||| |||| |.|||| ||| ||
Sbjct 507 ACTTGGGCTCATGTTCAAAGTGAACACAGACTACAAGTCTAGTTTAAAGCATTTTCAGTTAGCCTTGATTGACT 580
Query 353 G---TCCCCGTACT----------CTGGAAT---ACTTC-----GCCCCTTGCT-------CCAGA------CT 392
| |||..||||| |||.||| |.||| ||||.||..| ||||| .|
Sbjct 581 GTAATCCATGTACTTTGTCCAATGCTGAAATTCAATTTCATATTGCCCATTTGTATGAAACCCAGAGGAAGTAT 654
Query 393 CCCTTCTACTCTG---AGGA--------AAAAAAAAATCGGACGCTTTGG--GACCGGGCTAAACCGGGT--CT 451
| |.|||| |||| ||.|| ||||.| |||.| .||||| | ||
Sbjct 655 C------ATTCTGCAAAGGAGGCATATGAACAA-----------CTTTTGCAGACAG---AAAACC---TTCCT 705
Query 452 ACACCA-------CA-------TGC--CTGTTACTT-------------------------------------- 471
.|||.| || ||| |.||||..|
Sbjct 706 GCACAAGTAAAAGCAACTGTATTGCAACAGTTAGGTTGGATGCATCATAATATGGATCTAGTAGGAGACAAAGC 779
Query 472 -------------------------------------------------------------------------- 471
Sbjct 780 CACAAAGGAAAGCTATGCTATTCAGTATCTCCAAAAGTCTTTGGAGGCAGATCCTAATTCTGGCCAATCGTGGT 853
Query 472 -------------------------------------------------------------------------- 471
Sbjct 854 ATTTTCTTGGAAGGCAATCTATTGATAAATCAGAAGCAAGTGCAGATACATGGTGTTCAATAGGTGTGTTGTAT 927
Query 472 -------------------------------------------------------------------------- 471
Sbjct 928 CAGCAGCAAAATCAGCCTATGGATGCTTTACAGGCATATATTTGTGCTGTACAATTGGACCATGGGCATGCCGC 1001
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1002 AGCCTGGATGGACCTAGGTACTCTCTATGAATCCTGCAATCAACCTCAAGATGCCATTAAATGCTACCTAAATG 1075
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1076 CAGCTAGAAGCAAACGTTGTAGTAATACCTCTACGCTTGCTGCAAGAATTAAATTTCTACAGAATGGTTCTGAT 1149
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1150 AACTGGAATGGTGGCCAGAGTCTTTCACATCATCCAGTACAGCAAGTTTATTCGTTGTGTTTGACACCACAGAA 1223
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1224 ATTACAGCACTTGGAACAACTGCGAGCAAATAGAGATAATTTAAATCCAGCACAGAAGCATCAGCTGGAACAGT 1297
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1298 TAGAAAGTCAGTTTGTCTTAATGCAGCAAATGAGACACAAAGAAGTTGCTCAGGGGCTTCATAAAAGTCAGAGT 1371
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1372 TCATGTTTGTCAGGACCTAATGAAGAACAACCTCTGTTTTCCACTGGGTCAGCCCAGTATCACCAGGCAACTAG 1445
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1446 CACTGGTATTAAGAAGGCGAATGAACATCTCACTCTGCCTAGTAATTCAGTACCACAGGGGGATGCTGACAGTC 1519
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1520 ACCTCTCCTGTCATACTGCTACCTCAGGTGGACAACAAGGCATTATGTTTACCAAAGAGAGCAAGCCTTCAAAA 1593
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1594 AATAGATCCTTGGTGCCTGAAACAAGCAGGCATACTGGAGACACATCTAATGGCTGTGCTGATGTCAAGGGACT 1667
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1668 TTCTAATCATGTTCATCAGTTGATAGCAGATGCTGTTTCCAGTCCTAACCATGGAGATTCACCAAATTTATTAA 1741
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1742 TTGCAGACAATCCTCAGCTCTCTGCTTTGTTGATTGGAAAAGCCAATGGCAATGTGGGTACTGGAACCTGTGAC 1815
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1816 AAAGTGAATAATATTCACCCAGCTGTTCATACAAAGACTGATCATTCTGTTGCCTCTTCACCCTCTTCAGCCAT 1889
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1890 TTCCACAGCAACACCTTCTCCTAAATCCACTGAGCAGAGAAGCATAAACAGTGTTACCAGCCTTAACAGTCCTC 1963
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1964 ACAGTGGATTACACACAGTCAATGGAGAGGGGCTGGGGAAGTCACAGAGCTCTACAAAAGTAGACCTGCCTTTA 2037
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2038 GCTAGCCACAGATCTACTTCTCAGATCTTACCATCAATGTCAGTGTCTATATGCCCCAGTTCAACAGAAGTTCT 2111
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2112 GAAAGCATGCAGGAATCCAGGTAAAAATGGCTTGTCTAATAGCTGCATTTTGTTAGATAAATGTCCACCTCCAA 2185
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2186 GACCACCAACTTCACCATACCCACCCTTGCCAAAGGACAAGTTGAATCCACCCACACCTAGTATTTACTTGGAA 2259
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2260 AATAAACGTGATGCTTTCTTTCCTCCATTACATCAATTTTGTACAAATCCAAAAAACCCTGTTACAGTAATACG 2333
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2334 TGGCCTTGCTGGAGCTCTTAAATTAGATCTTGGACTTTTCTCTACCAAAACTTTGGTAGAAGCTAACAATGAAC 2407
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2408 ATATGGTAGAAGTGAGGACACAGTTGCTGCAACCAGCAGATGAAAACTGGGATCCCACTGGAACAAAGAAAATC 2481
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2482 TGGCGTTGTGAAAGCAATAGATCTCATACTACAATTGCCAAATACGCACAATACCAGGCTTCCTCCTTCCAGGA 2555
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2556 ATCATTGAGAGAAGAAAATGAGAAAAGAACACAACACAAAGATCATTCAGATAACGAATCCACATCTTCAGAGA 2629
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2630 ATTCTGGAAGGAGAAGGAAAGGACCTTTTAAAACCATAAAATTTGGGACCAACATTGACCTCTCTGATAACAAA 2703
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2704 AAGTGGAAGTTGCAGTTACATGAACTGACTAAACTTCCTGCTTTTGCGCGTGTGGTGTCAGCAGGAAATCTTCT 2777
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2778 AACCCATGTTGGGCATACCATTCTGGGCATGAATACAGTACAACTGTATATGAAAGTTCCAGGGAGTCGGACAC 2851
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2852 CAGGTCACCAAGAAAATAACAACTTCTGCTCTGTTAACATAAATATTGGTCCAGGAGATTGTGAATGGTTTGTT 2925
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2926 GTACCTGAAGATTATTGGGGTGTTCTGAATGACTTCTGTGAAAAAAATAATTTGAATTTTTTAATGAGTTCTTG 2999
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3000 GTGGCCCAACCTTGAAGATCTTTATGAAGCAAATGTCCCTGTGTATAGATTTATTCAGCGACCTGGAGATTTGG 3073
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3074 TCTGGATAAATGCAGGCACTGTGCATTGGGTTCAAGCTGTTGGCTGGTGCAATAACATTGCCTGGAATGTTGGT 3147
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3148 CCACTTACAGCCTGCCAGTATAAATTGGCAGTGGAACGGTATGAATGGAACAAATTGAAAAGTGTGAAGTCACC 3221
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3222 AGTACCCATGGTGCATCTTTCCTGGAATATGGCACGAAATATCAAAGTCTCAGATCCAAAGCTTTTTGAAATGA 3295
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3296 TTAAGTATTGTCTTTTGAAAATTCTGAAGCAATATCAGACATTGAGAGAAGCTCTTGTTGCAGCAGGAAAAGAG 3369
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3370 GTTATATGGCATGGGCGGACAAATGATGAACCAGCTCATTACTGTAGCATTTGTGAGGTGGAGGTTTTTAATCT 3443
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3444 GCTTTTTGTCACTAATGAAAGCAATACTCAAAAAACCTACATAGTACATTGCCATGATTGTGCACGAAAAACAA 3517
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3518 GCAAAAGTTTGGAAAATTTTGTGGTGCTCGAACAGTACAAAATGGAGGACCTAATCCAAGTTTATGATCAATTT 3591
Query 472 ------------------------------ 471
Sbjct 3592 ACACTAGCTCTTTCATTATCATCCTCATCT 3621
