Nucleotide Global Alignment
Description
- Query:
- TRCN0000479140
- Subject:
- NM_001258259.1
- Aligned Length:
- 4028
- Identities:
- 397
- Gaps:
- 3592
Alignment
Query 1 ATGAAATCGTGCGCAGTGTCGCTCACTACCGCCGCTGTTGCCTTCGGTGATGAGGCAAAGAAAATGGCGGAAGG 74
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAATCCTGCGCAGTGTCGCTCACTACCGCCGCTGTTGCCTTCGGTGATGAGGCAAAGAAAATGGCGGAAGG 74
Query 75 AAAAGCGAGCCGCGAGAGTGAAGAGGAGTCTGTTAGCCTGACAGTCGAGGAAAGGGAGGCGCTTGGTGGCATGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AAAAGCGAGCCGCGAGAGTGAAGAGGAGTCTGTTAGCCTGACAGTCGAGGAAAGGGAGGCGCTTGGTGGCATGG 148
Query 149 ACAGCCGTCTCTTCGGGTTCGTGAGGCTTCATGAAGATGGCGCCAGAACGAAGACCCTACTAGGCAAGG----- 217
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACAGCCGTCTCTTCGGGTTCGTGAGGCTTCATGAAGATGGCGCCAGAACGAAGACCCTACTAGGCAAGGCTGTT 222
Query 218 ----------------------TAAAAGC--AACCAGACGCAAAG------------TCTTT---------GGT 246
||||||| | |.|.|||| ||||| |||
Sbjct 223 CGCTGCTACGAATCTTTAATCTTAAAAGCTGA-----AGGAAAAGTGGAGTCTGACTTCTTTTGCCAATTAGGT 291
Query 247 CCGCACTT------------------------------------TGC------------------TCTACCAAG 266
||||| ||| |.||| ||
Sbjct 292 ---CACTTCAACCTCTTGTTGGAAGATTATTCAAAAGCATTATCTGCATATCAGAGATATTACAGTTTAC--AG 360
Query 267 GC----------------CCCGCGTTCCT-TACCGCC----------------------CA------------- 288
|| .|.|||||..| ||..||| ||
Sbjct 361 GCTGACTACTGGAAGAATGCTGCGTTTTTATATGGCCTTGGTTTGGTCTACTTCTACTACAATGCATTTCATTG 434
Query 289 -GCCAGTA------------------TTTATTTTG------GCTCTGCTCCATGGCCAAGG------------- 324
||.|.|| |||||.||| |||.|..||.| |||||||
Sbjct 435 GGCAATTAAAGCATTTCAAGATGTCCTTTATGTTGACCCCAGCTTTTGTCGA--GCCAAGGAAATTCATTTACG 506
Query 325 ----GGTCGGA-----AAAGTG------------------------------TTTC---TTGCCT---TTG-CT 352
||.|..| |||||| |||| |.|||| ||| ||
Sbjct 507 ACTTGGGCTCATGTTCAAAGTGAACACAGACTACAAGTCTAGTTTAAAGCATTTTCAGTTAGCCTTGATTGACT 580
Query 353 G---TCCCCGTACT----------CTGGAAT---ACTTC-----GCCCCTTGCT-------CCAGA------CT 392
| |||..||||| |||.||| |.||| ||||.||..| ||||| .|
Sbjct 581 GTAATCCATGTACTTTGTCCAATGCTGAAATTCAATTTCATATTGCCCATTTGTATGAAACCCAGAGGAAGTAT 654
Query 393 CCCTTCTACTCTG---AGGA--------AAAAAAAAATCGGACGCTTTGG--GACCGGGCTAAACCGGGT--CT 451
| |.|||| |||| ||.|| ||||.| |||.| .||||| | ||
Sbjct 655 C------ATTCTGCAAAGGAGGCATATGAACAA-----------CTTTTGCAGACAG---AAAACC---TTCCT 705
Query 452 ACACCA-------CA-------TGC--CTGTTACTT-------------------------------------- 471
.|||.| || ||| |.||||..|
Sbjct 706 GCACAAGTAAAAGCAACTGTATTGCAACAGTTAGGTTGGATGCATCATAATATGGATCTAGTAGGAGACAAAGC 779
Query 472 -------------------------------------------------------------------------- 471
Sbjct 780 CACAAAGGAAAGCTATGCTATTCAGTATCTCCAAAAGTCTTTGGAGGCAGATCCTAATTCTGGCCAATCGTGGT 853
Query 472 -------------------------------------------------------------------------- 471
Sbjct 854 ATTTTCTTGGAAGGCAATCTATTGATAAATCAGAAGCAAGTGCAGATACATGGTGTTCAATAGGTGTGTTGTAT 927
Query 472 -------------------------------------------------------------------------- 471
Sbjct 928 CAGCAGCAAAATCAGCCTATGGATGCTTTACAGGCATATATTTGTGCTGTACAATTGGACCATGGGCATGCCGC 1001
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1002 AGCCTGGATGGACCTAGGTACTCTCTATGAATCCTGCAATCAACCTCAAGATGCCATTAAATGCTACCTAAATG 1075
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1076 CAGCTAGAAGCAAACGTTGTAGTAATACCTCTACGCTTGCTGCAAGAATTAAATTTCTACAGAATGGTTCTGAT 1149
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1150 AACTGGAATGGTGGCCAGAGTCTTTCACATCATCCAGTACAGCAAGTTTATTCGTTGTGTTTGACACCACAGAA 1223
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1224 ATTACAGCACTTGGAACAACTGCGAGCAAATAGAGATAATTTAAATCCAGCACAGAAGCATCAGCTGGAACAGT 1297
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1298 TAGAAAGTCAGTTTGTCTTAATGCAGCAAATGAGACACAAAGAAGTTGCTCAGGTACGAACTACTGGAATTCAT 1371
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1372 AACGGGGCCATAACTGATTCATCACTGCCTACAAACTCTGTCTCTAATCGACAACCACATGGTGCTCTGACCAG 1445
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1446 AGTATCTAGCGTCTCTCAGCCTGGAGTTCGCCCTGCTTGTGTTGAAAAACTTTTGTCCAGTGGAGCTTTTTCTG 1519
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1520 CAGGCTGTATTCCTTGTGGCACATCAAAAATTCTAGGAAGTACAGACACTATCTTGCTAGGCAGTAATTGTATA 1593
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1594 GCAGGAAGTGAAAGTAATGGAAATGTGCCTTACCTGCAGCAAAATACACACACTCTACCTCATAATCATACAGA 1667
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1668 CCTGAACAGCAGCACAGAAGAGCCATGGAGAAAACAGCTATCTAACTCCGCTCAGGGGCTTCATAAAAGTCAGA 1741
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1742 GTTCATGTTTGTCAGGACCTAATGAAGAACAACCTCTGTTTTCCACTGGGTCAGCCCAGTATCACCAGGCAACT 1815
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1816 AGCACTGGTATTAAGAAGGCGAATGAACATCTCACTCTGCCTAGTAATTCAGTACCACAGGGGGATGCTGACAG 1889
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1890 TCACCTCTCCTGTCATACTGCTACCTCAGGTGGACAACAAGGCATTATGTTTACCAAAGAGAGCAAGCCTTCAA 1963
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1964 AAAATAGATCCTTGGTGCCTGAAACAAGCAGGCATACTGGAGACACATCTAATGGCTGTGCTGATGTCAAGGGA 2037
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2038 CTTTCTAATCATGTTCATCAGTTGATAGCAGATGCTGTTTCCAGTCCTAACCATGGAGATTCACCAAATTTATT 2111
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2112 AATTGCAGACAATCCTCAGCTCTCTGCTTTGTTGATTGGAAAAGCCAATGGCAATGTGGGTACTGGAACCTGTG 2185
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2186 ACAAAGTGAATAATATTCACCCAGCTGTTCATACAAAGACTGATCATTCTGTTGCCTCTTCACCCTCTTCAGCC 2259
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2260 ATTTCCACAGCAACACCTTCTCCTAAATCCACTGAGCAGAGAAGCATAAACAGTGTTACCAGCCTTAACAGTCC 2333
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2334 TCACAGTGGATTACACACAGTCAATGGAGAGGGGCTGGGGAAGTCACAGAGCTCTACAAAAGTAGACCTGCCTT 2407
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2408 TAGCTAGCCACAGATCTACTTCTCAGATCTTACCATCAATGTCAGTGTCTATATGCCCCAGTTCAACAGAAGTT 2481
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2482 CTGAAAGCATGCAGGAATCCAGGTAAAAATGGCTTGTCTAATAGCTGCATTTTGTTAGATAAATGTCCACCTCC 2555
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2556 AAGACCACCAACTTCACCATACCCACCCTTGCCAAAGGACAAGTTGAATCCACCCACACCTAGTATTTACTTGG 2629
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2630 AAAATAAACGTGATGCTTTCTTTCCTCCATTACATCAATTTTGTACAAATCCAAAAAACCCTGTTACAGTAATA 2703
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2704 CGTGGCCTTGCTGGAGCTCTTAAATTAGATCTTGGACTTTTCTCTACCAAAACTTTGGTAGAAGCTAACAATGA 2777
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2778 ACATATGGTAGAAGTGAGGACACAGTTGCTGCAACCAGCAGATGAAAACTGGGATCCCACTGGAACAAAGAAAA 2851
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2852 TCTGGCGTTGTGAAAGCAATAGATCTCATACTACAATTGCCAAATACGCACAATACCAGGCTTCCTCCTTCCAG 2925
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2926 GAATCATTGAGAGAAGAAAATGAGAAAAGAACACAACACAAAGATCATTCAGATAACGAATCCACATCTTCAGA 2999
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3000 GAATTCTGGAAGGAGAAGGAAAGGACCTTTTAAAACCATAAAATTTGGGACCAACATTGACCTCTCTGATAACA 3073
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3074 AAAAGTGGAAGTTGCAGTTACATGAACTGACTAAACTTCCTGCTTTTGCGCGTGTGGTGTCAGCAGGAAATCTT 3147
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3148 CTAACCCATGTTGGGCATACCATTCTGGGCATGAATACAGTACAACTGTATATGAAAGTTCCAGGGAGTCGGAC 3221
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3222 ACCAGGTCACCAAGAAAATAACAACTTCTGCTCTGTTAACATAAATATTGGTCCAGGAGATTGTGAATGGTTTG 3295
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3296 TTGTACCTGAAGATTATTGGGGTGTTCTGAATGACTTCTGTGAAAAAAATAATTTGAATTTTTTAATGAGTTCT 3369
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3370 TGGTGGCCCAACCTTGAAGATCTTTATGAAGCAAATGTCCCTGTGTATAGATTTATTCAGCGACCTGGAGATTT 3443
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3444 GGTCTGGATAAATGCAGGCACTGTGCATTGGGTTCAAGCTGTTGGCTGGTGCAATAACATTGCCTGGAATGTTG 3517
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3518 GTCCACTTACAGCCTGCCAGTATAAATTGGCAGTGGAACGGTATGAATGGAACAAATTGAAAAGTGTGAAGTCA 3591
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3592 CCAGTACCCATGGTGCATCTTTCCTGGAATATGGCACGAAATATCAAAGTCTCAGATCCAAAGCTTTTTGAAAT 3665
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3666 GATTAAGTATTGTCTTTTGAAAATTCTGAAGCAATATCAGACATTGAGAGAAGCTCTTGTTGCAGCAGGAAAAG 3739
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3740 AGGTTATATGGCATGGGCGGACAAATGATGAACCAGCTCATTACTGTAGCATTTGTGAGGTGGAGGTTTTTAAT 3813
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3814 CTGCTTTTTGTCACTAATGAAAGCAATACTCAAAAAACCTACATAGTACATTGCCATGATTGTGCACGAAAAAC 3887
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3888 AAGCAAAAGTTTGGAAAATTTTGTGGTGCTCGAACAGTACAAAATGGAGGACCTAATCCAAGTTTATGATCAAT 3961
Query 472 -------------------------------- 471
Sbjct 3962 TTACACTAGCTCTTTCATTATCATCCTCATCT 3993
