Nucleotide Global Alignment
Description
- Query:
- TRCN0000479140
- Subject:
- NR_047621.1
- Aligned Length:
- 6017
- Identities:
- 397
- Gaps:
- 5570
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTCATCGTTTGTTGTTTAGATAATATCATGAACTGATAAATGCAGTTGCCACGTTGATTCCCTAGGGCCTGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTACCGACTGAGGTCATAAGATATTATGCCTTCTCTTTAGACTTGGTCAGTGGAGAGGAAATGGGCAAAGAACC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCCTATGGAGGTGACAAGGCCTTAGGGCCAAAAGTCTTGAGGGTGAAGGTTTAGGGCCTGCGCAGCTTCCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCATGCCCCGCAAGGTCTCGCATTCGCAAGGCTTGTGACAGTGGGAGCCTCATTACGGACTCTCCTAAAGTCCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGTGTCCTCTTTTCGCATTTGCGCCCCGTGGGTGATGCCCGATGCCGCCCTTCCCATCGCTCTCTTCCCCTTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGCGTATCGCAACTGCAAAAACACCCAGCACAGACACTCCATTTTCTATCTTAATGCATTTAACTAGCACAAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTACAGGTTGTTCCATCCCAGAGACTACCCTTTTCTCCATAGACGTGACCATCAACCAACCAGCGGTCAGAATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGTCAGCCTCTGTCATGTTCCTAGGTCCTTGGCGAACTGGCTGGGCGGGGTCCCAGCAGCCTAGGAGTACAGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGCAATGCCTGACGTAAGTCAACAAAGATCACGTGAGACGAATCAGTCGCCTAGATTGGCTACAACTAAGTGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTGGGAGCGGGGAGGTCGCGGCGGCTGCGTGGGGTTCGCCCGTGACACAATTACAACTTTGTGCTGGTGCTGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAGTTTGTGATTTTAAGAAATTCTGCTGTGCTCTCCAGCACTGCGAGCTTCTGCCTTCCCTGTAGTTTCCCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGTGATCCAGGTAGCCGAGTTCCGCTGCCCGTGCTTCGGTAGCTTAAGTCTTTGCCTCAGCTTTTTTCCTTGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGCCGCTGAGGAGGCGATAAAATTGGCGTCACAGTCTCAAGCAGCGATTGAAGGCGTCTTTTCAACTACTCGAT 962
Query 1 -------------------------------------------ATGAAATCGTGCGCAGTGTCGCTCACTACCG 31
||||||||.||||||||||||||||||||||
Sbjct 963 TAAGGTTGGGTATCGTCGTGGGACTTGGAAATTTGTTGTTTCCATGAAATCCTGCGCAGTGTCGCTCACTACCG 1036
Query 32 CCGCTGTTGCCTTCGGTGATGAGGCAAAGAAAATGGCGGAAGGAAAAGCGAGCCGCGAGAGTGAAGAGGAGTCT 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCGCTGTTGCCTTCGGTGATGAGGCAAAGAAAATGGCGGAAGGAAAAGCGAGCCGCGAGAGTGAAGAGGAGTCT 1110
Query 106 GTTAGCCTGACAGTCGAGGAAAGGGAGGCGCTTGGTGGCATGGACAGCCGTCTCTTCGGGTTCGTGAGGCTTCA 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTTAGCCTGACAGTCGAGGAAAGGGAGGCGCTTGGTGGCATGGACAGCCGTCTCTTCGGGTTCGTGAGGCTTCA 1184
Query 180 TGAAGATGGCGCCAGAACGAAGACCCTACTAGGCAAGG---------------------------TAAAAGC-- 224
|||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1185 TGAAGATGGCGCCAGAACGAAGACCCTACTAGGCAAGGCTGTTCGCTGCTACGAATCTTTAATCTTAAAAGCTG 1258
Query 225 AACCAGACGCAAAG------------TCTTT---------GGTCCGCACTTTGCTCTACCAAGGCCCCGCGTT- 276
| |.|.|||| ||||| ||| ||||| ||| ||.|..|||
Sbjct 1259 A-----AGGAAAAGTGGAGTCTGACTTCTTTTGCCAATTAGGT---CACTT--------CAA--CCTCTTGTTG 1314
Query 277 ----------------CCTTACCGCC----CAGCCAG-TATT-TATTTT---GGCT----------------CT 309
|.|||.|..| ||| || |||| .|.||| |||| ||
Sbjct 1315 GAAGATTATTCAAAAGCATTATCTGCATATCAG--AGATATTACAGTTTACAGGCTGACTACTGGAAGAATGCT 1386
Query 310 GC-----TCCATGGCCAAGG---GGTC-------------------------GG-----AAAAGTGTTTC---- 341
|| |..||||||..|| |||| || .||||..||||
Sbjct 1387 GCGTTTTTATATGGCCTTGGTTTGGTCTACTTCTACTACAATGCATTTCATTGGGCAATTAAAGCATTTCAAGA 1460
Query 342 TTGCCTT--TGCTGTCCCCGTA-CTCT-----------GGAA----------TACTTCGCCCCTTGCTC----- 386
|..|||| ||.||.|||| | ||.| |||| .||||.|.|.|.||.||
Sbjct 1461 TGTCCTTTATGTTGACCCC--AGCTTTTGTCGAGCCAAGGAAATTCATTTACGACTTGGGCTCATGTTCAAAGT 1532
Query 387 -----CAGACTCC----CT-----------------------TCTACTCTGAGG-AAAAAAAAAATCGGACGCT 427
||||||.| || .|||.||..||| |.||..|.|.|...||||.
Sbjct 1533 GAACACAGACTACAAGTCTAGTTTAAAGGATTGAGTGCAGTGGCTATTCACAGGCATAATCATAGTACAACGCG 1606
Query 428 TTGGGA---CCGGGC------TAAACC-------------------------GGGTCTACACCA----CA---- 459
| ||| ||.||| |.|.|| |||.|||||.|| ||
Sbjct 1607 T--GGAATTCCTGGCCCAAAGTGATCCTTCCATCTCAGACTCCCAAGCAGTTGGGACTACAGCATTTTCAGTTA 1678
Query 460 --------TGCCTGT--------TACTT---------------------------------------------- 471
||.|||| |||||
Sbjct 1679 GCCTTGATTGACTGTAATCCATGTACTTTGTCCAATGCTGAAAAGGAAGTATCATTCTGCAAAGGAGGCATATG 1752
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1753 AACAACTTTTGCAGACAGAAAACCTTCCTGCACAAGTAAAAGCAACTGTATTGCAACAGTTAGGTTGGATGCAT 1826
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1827 CATAATATGGATCTAGTAGGAGACAAAGCCACAAAGGAAAGCTATGCTATTCAGTATCTCCAAAAGTCTTTGGA 1900
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1901 GGCAGATCCTAATTCTGGCCAATCGTGGTATTTTCTTGGAAGGTGTTATTCAAGTATTGGGAAAGTTCAGGATG 1974
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1975 CCTTTATATCTTACAGGCAATCTATTGATAAATCAGAAGCAAGTGCAGATACATGGTGTTCAATAGGTGTGTTG 2048
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2049 TATCAGCAGCAAAATCAGCCTATGGATGCTTTACAGGCATATATTTGTGCTGTACAATTGGACCATGGGCATGC 2122
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2123 CGCAGCCTGGATGGACCTAGGTACTCTCTATGAATCCTGCAATCAACCTCAAGATGCCATTAAATGCTACCTAA 2196
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2197 ATGCAGCTAGAAGCAAACGTTGTAGTAATACCTCTACGCTTGCTGCAAGAATTAAATTTCTACAGGCTCAGTTG 2270
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2271 TGTAACCTTCCACAAAGTAGTCTACAGAATAAAACTAAATTACTTCCTAGTATTGAGGAGGCATGGAGCCTACC 2344
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2345 AATCCCCGCAGAGCTTACCTCCAGGCAGGGTGCCATGAACACAGCACAGCAGGCTTATAGAGCTCATGATCCAA 2418
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2419 ATACTGAACATGTATTAAACCACAGTCAAACACCAATTTTACAGCAATCCTTGTCACTACACATGATTACTTCT 2492
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2493 AGCCAAGTAGAAGGCCTGTCCAGTCCTGCCAAGAAGAAAAGAACATCTAGTCCAACAAAGAATGGTTCTGATAA 2566
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2567 CTGGAATGGTGGCCAGAGTCTTTCACATCATCCAGTACAGCAAGTTTATTCGTTGTGTTTGACACCACAGAAAT 2640
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2641 TACAGCACTTGGAACAACTGCGAGCAAATAGAGATAATTTAAATCCAGCACAGAAGCATCAGCTGGAACAGTTA 2714
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2715 GAAAGTCAGTTTGTCTTAATGCAGCAAATGAGACACAAAGAAGTTGCTCAGGTACGAACTACTGGAATTCATAA 2788
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2789 CGGGGCCATAACTGATTCATCACTGCCTACAAACTCTGTCTCTAATCGACAACCACATGGTGCTCTGACCAGAG 2862
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2863 TATCTAGCGTCTCTCAGCCTGGAGTTCGCCCTGCTTGTGTTGAAAAACTTTTGTCCAGTGGAGCTTTTTCTGCA 2936
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2937 GGCTGTATTCCTTGTGGCACATCAAAAATTCTAGGAAGTACAGACACTATCTTGCTAGGCAGTAATTGTATAGC 3010
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3011 AGGAAGTGAAAGTAATGGAAATGTGCCTTACCTGCAGCAAAATACACACACTCTACCTCATAATCATACAGACC 3084
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3085 TGAACAGCAGCACAGAAGAGCCATGGAGAAAACAGCTATCTAACTCCGCTCAGGAATCCAGTTGGAAAATAAAC 3158
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3159 GTGATGCTTTCTTTCCTCCATTACATCAATTTTGTACAAATCCAAAAAACCCTGTTACAGTAATACGTGGCCTT 3232
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3233 GCTGGAGCTCTTAAATTAGATCTTGGACTTTTCTCTACCAAAACTTTGGTAGAAGCTAACAATGAACATATGGT 3306
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3307 AGAAGTGAGGACACAGTTGCTGCAACCAGCAGATGAAAACTGGGATCCCACTGGAACAAAGAAAATCTGGCGTT 3380
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3381 GTGAAAGCAATAGATCTCATACTACAATTGCCAAATACGCACAATACCAGGCTTCCTCCTTCCAGGAATCATTG 3454
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3455 AGAGAAGAAAATGAGAAAAGAACACAACACAAAGATCATTCAGATAACGAATCCACATCTTCAGAGAATTCTGG 3528
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3529 AAGGAGAAGGAAAGGACCTTTTAAAACCATAAAATTTGGGACCAACATTGACCTCTCTGATAACAAAAAGTGGA 3602
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3603 AGTTGCAGTTACATGAACTGACTAAACTTCCTGCTTTTGCGCGTGTGGTGTCAGCAGGAAATCTTCTAACCCAT 3676
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3677 GTTGGGCATACCATTCTGGGCATGAATACAGTACAACTGTATATGAAAGTTCCAGGGAGTCGGACACCAGGTCA 3750
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3751 CCAAGAAAATAACAACTTCTGCTCTGTTAACATAAATATTGGTCCAGGAGATTGTGAATGGTTTGTTGTACCTG 3824
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3825 AAGATTATTGGGGTGTTCTGAATGACTTCTGTGAAAAAAATAATTTGAATTTTTTAATGAGTTCTTGGTGGCCC 3898
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3899 AACCTTGAAGATCTTTATGAAGCAAATGTCCCTGTGTATAGATTTATTCAGCGACCTGGAGATTTGGTCTGGAT 3972
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3973 AAATGCAGGCACTGTGCATTGGGTTCAAGCTGTTGGCTGGTGCAATAACATTGCCTGGAATGTTGGTCCACTTA 4046
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4047 CAGCCTGCCAGTATAAATTGGCAGTGGAACGGTATGAATGGAACAAATTGAAAAGTGTGAAGTCACCAGTACCC 4120
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4121 ATGGTGCATCTTTCCTGGAATATGGCACGAAATATCAAAGTCTCAGATCCAAAGCTTTTTGAAATGATTAAGTA 4194
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4195 TTGTCTTTTGAAAATTCTGAAGCAATATCAGACATTGAGAGAAGCTCTTGTTGCAGCAGGAAAAGAGGTTATAT 4268
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4269 GGCATGGGCGGACAAATGATGAACCAGCTCATTACTGTAGCATTTGTGAGGTGGAGGTTTTTAATCTGCTTTTT 4342
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4343 GTCACTAATGAAAGCAATACTCAAAAAACCTACATAGTACATTGCCATGATTGTGCACGAAAAACAAGCAAAAG 4416
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4417 TTTGGAAAATTTTGTGGTGCTCGAACAGTACAAAATGGAGGACCTAATCCAAGTTTATGATCAATTTACACTAG 4490
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4491 CTCTTTCATTATCATCCTCATCTTGATATAGTTCCATGAATATTAAATGAGATTATTTCTGCTCTTCAGGAAAT 4564
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4565 TTCTGCACCACTGGTTTTGTAGCTGTTTCATAAAACTGTTGACTAAAAGCTATGTCTATGCAACCTTCCAAGAA 4638
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4639 TAGTATGTCAAGCAACTGGACACAGTGCTGCCTCTGCTTCAGGACTTAACATGCTGATCCAGCTGTACTTCAGA 4712
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4713 AAAATAATATTAATCATATGTTTTGTGTACGTATGACAAACTGTCAAAGTGACACAGAATACTGATTTGAAGAT 4786
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4787 AGCCTTTTTTATGTTTCTCTATTTCTGGGCTGATGAATTAATATTCATTTGTATTTTAACCCTGCAGAATTTTC 4860
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4861 CTTAGTTAAAAACACTTTCCTAGCTGGTCATTTCTTCATAAGATAGCAAATTTAAATCTCTCCTCGATCAGCTT 4934
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4935 TTAAAAAATGTGTACTATTATCTGAGGAAGTTTTTTACTGCTTTATGTTTTTGTGTGTTTTGAGGCCATGATGA 5008
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5009 TTACATTTGTGGTTCCAAAATAATTTTTTTAAATATTAATAGCCCATATACAAAGATAATGGATTGCACATAGA 5082
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5083 CAAAGAAATAAACTTCAGATTTGTGATTTTTGTTTCTAAACTTGATACAGATTTACACTATTTATAAATACGTA 5156
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5157 TTTATTGCCTGAAAATATTTGTGAATGGAATGTTGTTTTTTTCCAGACGTAACTGCCATTAAATACTAAGGAGT 5230
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5231 TCTGTAGTTTTAAACACTACTCCTATTACATTTTATATGTGTAGATAAAACTGCTTAGTATTATACAGAAATTT 5304
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5305 TTATTAAAATTGTTAAATGTTTAAAGGGTTTCCCAATGTTTGAGTTTAAAAAAGACTTTCTGAAAAAATCCACT 5378
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5379 TTTTGTTCATTTTCAAACCTAATGATTATATGTATTTTATATGTGTGTGTATGTGTACACACATGTATAATATA 5452
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5453 TACAGAAACCTCGATATATAATTGTATAGATTTTAAAAGTTTTATTTTTTACATCTATGGTAGTTTTTGAGGTG 5526
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5527 CCTATTATAAAGTATTACGGAAGTTTGCTGTTTTTAAAGTAAATGTCTTTTAGTGTGATTTATTAAGTTGTAGT 5600
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5601 CACCATAGTGATAGCCCATAAATAATTGCTGGAAAATTGTATTTTATAACAGTAGAAAACATATAGTCAGTGAA 5674
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5675 GTAAATATTTTAAAGGAAACATTATATAGATTTGATAAATGTTGTTTATAATTAAGAGTTTCTTATGGAAAAGA 5748
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5749 GATTCAGAATGATAACCTCTTTTAGAGAACAAATAAGTGACTTATTTTTTTAAAGCTAGATGACTTTGAAATGC 5822
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5823 TATACTGTCCTGCTTGTACAACATGGTTTGGGGTGAAGGGGAGGAAAGTATTAAAAAATCTATATCGCTAGTAA 5896
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5897 ATTGTAATAAGTTCTATTAAAACTTGTATTTCATATGAAAAATTTGCTAATTTAATATTAACTCATTTGATAAT 5970
Query 472 ----------------------- 471
Sbjct 5971 AATACTTGTCTTTTCTACCTCTC 5993
