Nucleotide Global Alignment
Description
- Query:
- TRCN0000479140
- Subject:
- NR_047640.1
- Aligned Length:
- 5761
- Identities:
- 397
- Gaps:
- 5314
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTCATCGTTTGTTGTTTAGATAATATCATGAACTGATAAATGCAGTTGCCACGTTGATTCCCTAGGGCCTGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTACCGACTGAGGTCATAAGATATTATGCCTTCTCTTTAGACTTGGTCAGTGGAGAGGAAATGGGCAAAGAACC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCCTATGGAGGTGACAAGGCCTTAGGGCCAAAAGTCTTGAGGGTGAAGGTTTAGGGCCTGCGCAGCTTCCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCATGCCCCGCAAGGTCTCGCATTCGCAAGGCTTGTGACAGTGGGAGCCTCATTACGGACTCTCCTAAAGTCCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGTGTCCTCTTTTCGCATTTGCGCCCCGTGGGTGATGCCCGATGCCGCCCTTCCCATCGCTCTCTTCCCCTTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGCGTATCGCAACTGCAAAAACACCCAGCACAGACACTCCATTTTCTATCTTAATGCATTTAACTAGCACAAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTACAGGTTGTTCCATCCCAGAGACTACCCTTTTCTCCATAGACGTGACCATCAACCAACCAGCGGTCAGAATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGTCAGCCTCTGTCATGTTCCTAGGTCCTTGGCGAACTGGCTGGGCGGGGTCCCAGCAGCCTAGGAGTACAGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGCAATGCCTGACGTAAGTCAACAAAGATCACGTGAGACGAATCAGTCGCCTAGATTGGCTACAACTAAGTGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTGGGAGCGGGGAGGTCGCGGCGGCTGCGTGGGGTTCGCCCGTGACACAATTACAACTTTGTGCTGGTGCTGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAGTTTGTGATTTTAAGAAATTCTGCTGTGCTCTCCAGCACTGCGAGCTTCTGCCTTCCCTGTAGTTTCCCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGTGATCCAGGTAGCCGAGTTCCGCTGCCCGTGCTTCGGTAGCTTAAGTCTTTGCCTCAGCTTTTTTCCTTGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGCCGCTGAGGAGGCGATAAAATTGGCGTCACAGTCTCAAGCAGCGATTGAAGGCGTCTTTTCAACTACTCGAT 962
Query 1 -------------------------------------------ATGAAATCGTGCGCAGTGTCGCTCACTACCG 31
||||||||.||||||||||||||||||||||
Sbjct 963 TAAGGTTGGGTATCGTCGTGGGACTTGGAAATTTGTTGTTTCCATGAAATCCTGCGCAGTGTCGCTCACTACCG 1036
Query 32 CCGCTGTTGCCTTCGGTGATGAGGCAAAGAAAATGGCGGAAGGAAAAGCGAGCCGCGAGAGTGAAGAGGAGTCT 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCGCTGTTGCCTTCGGTGATGAGGCAAAGAAAATGGCGGAAGGAAAAGCGAGCCGCGAGAGTGAAGAGGAGTCT 1110
Query 106 GTTAGCCTGACAGTCGAGGAAAGGGAGGCGCTTGGTGGCATGGACAGCCGTCTCTTCGGGTTCGTGAGGCTTCA 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTTAGCCTGACAGTCGAGGAAAGGGAGGCGCTTGGTGGCATGGACAGCCGTCTCTTCGGGTTCGTGAGGCTTCA 1184
Query 180 TGAAGATGGCGCCAGAACGAAGACCCTACTAGGCAAGG---------------------------TAAAAGC-- 224
|||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1185 TGAAGATGGCGCCAGAACGAAGACCCTACTAGGCAAGGCTGTTCGCTGCTACGAATCTTTAATCTTAAAAGCTG 1258
Query 225 AACCAGACGCAAAG------------TCTTT---------GGTCCGCACTTTGCTCTACCAAGGCCCCGCGTT- 276
| |.|.|||| ||||| ||| ||||| ||| ||.|..|||
Sbjct 1259 A-----AGGAAAAGTGGAGTCTGACTTCTTTTGCCAATTAGGT---CACTT--------CAA--CCTCTTGTTG 1314
Query 277 ----------------CCTTACCGCC----CAGCCAG-TATT-TATTTT---GGCT----------------CT 309
|.|||.|..| ||| || |||| .|.||| |||| ||
Sbjct 1315 GAAGATTATTCAAAAGCATTATCTGCATATCAG--AGATATTACAGTTTACAGGCTGACTACTGGAAGAATGCT 1386
Query 310 GC-----TCCATGGCCAAGG---GGTC-------------------------GG-----AAAAGTGTTTC---- 341
|| |..||||||..|| |||| || .||||..||||
Sbjct 1387 GCGTTTTTATATGGCCTTGGTTTGGTCTACTTCTACTACAATGCATTTCATTGGGCAATTAAAGCATTTCAAGA 1460
Query 342 TTGCCTT--TGCTGTCCCCGTA-CTCT-----------GGAA----------TACTTCGCCCCTTGCTC----- 386
|..|||| ||.||.|||| | ||.| |||| .||||.|.|.|.||.||
Sbjct 1461 TGTCCTTTATGTTGACCCC--AGCTTTTGTCGAGCCAAGGAAATTCATTTACGACTTGGGCTCATGTTCAAAGT 1532
Query 387 -----CAGACTCC----CT-----------------------TCTACTCTGAGG-AAAAAAAAAATCGGACGCT 427
||||||.| || .|||.||..||| |.||..|.|.|...||||.
Sbjct 1533 GAACACAGACTACAAGTCTAGTTTAAAGGATTGAGTGCAGTGGCTATTCACAGGCATAATCATAGTACAACGCG 1606
Query 428 TTGGGA---CCGGGC------TAAACC-------------------------GGGTCTACACCA----CA---- 459
| ||| ||.||| |.|.|| |||.|||||.|| ||
Sbjct 1607 T--GGAATTCCTGGCCCAAAGTGATCCTTCCATCTCAGACTCCCAAGCAGTTGGGACTACAGCATTTTCAGTTA 1678
Query 460 --------TGCCTGT--------TACTT---------------------------------------------- 471
||.|||| |||||
Sbjct 1679 GCCTTGATTGACTGTAATCCATGTACTTTGTCCAATGCTGAAATTCAATTTCATATTGCCCATTTGTATGAAAC 1752
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1753 CCAGAGGAAGTATCATTCTGCAAAGGAGGCATATGAACAACTTTTGCAGACAGAAAACCTTCCTGCACAAGTAA 1826
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1827 AAGCAACTGTATTGCAACAGTTAGGTTGGATGCATCATAATATGGATCTAGTAGGAGACAAAGCCACAAAGGAA 1900
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1901 AGCTATGCTATTCAGTATCTCCAAAAGTCTTTGGAGGCAGATCCTAATTCTGGCCAATCGTGGTATTTTCTTGG 1974
Query 472 -------------------------------------------------------------------------- 471
Sbjct 1975 AAGGTGTTATTCAAGTATTGGGAAAGTTCAGGATGCCTTTATATCTTACAGGCAATCTATTGATAAATCAGAAG 2048
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2049 CAAGTGCAGATACATGGTGTTCAATAGGTGTGTTGTATCAGCAGCAAAATCAGCCTATGGATGCTTTACAGGCA 2122
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2123 TATATTTGTGCTGTACAATTGGACCATGGGCATGCCGCAGCCTGGATGGACCTAGGTACTCTCTATGAATCCTG 2196
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2197 CAATCAACCTCAAGATGCCATTAAATGCTACCTAAATGCAGCTAGAAGCAAACGTTGTAGTAATACCTCTACGC 2270
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2271 TTGCTGCAAGAATTAAATTTCTACAGAATGGTTCTGATAACTGGAATGGTGGCCAGAGTCTTTCACATCATCCA 2344
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2345 GTACAGCAAGTTTATTCGTTGTGTTTGACACCACAGAAATTACAGCACTTGGAACAACTGCGAGCAAATAGAGA 2418
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2419 TAATTTAAATCCAGCACAGAAGCATCAGCTGGAACAGTTAGAAAGTCAGTTTGTCTTAATGCAGCAAATGAGAC 2492
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2493 ACAAAGAAGTTGCTCAGGTACGAACTACTGGAATTCATAACGGGGCCATAACTGATTCATCACTGCCTACAAAC 2566
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2567 TCTGTCTCTAATCGACAACCACATGGTGCTCTGACCAGAGTATCTAGCGTCTCTCAGCCTGGAGTTCGCCCTGC 2640
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2641 TTGTGTTGAAAAACTTTTGTCCAGTGGAGCTTTTTCTGCAGGCTGTATTCCTTGTGGCACATCAAAAATTCTAG 2714
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2715 GAAGTACAGACACTATCTTGCTAGGCAGTAATTGTATAGCAGGAAGTGAAAGTAATGGAAATGTGCCTTACCTG 2788
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2789 CAGCAAAATACACACACTCTACCTCATAATCATACAGACCTGAACAGCAGCACAGAAGAGCCATGGAGAAAACA 2862
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2863 GCTATCTAACTCCGCTCAGGAATCCAGTTGGAAAATAAACGTGATGCTTTCTTTCCTCCATTACATCAATTTTG 2936
Query 472 -------------------------------------------------------------------------- 471
Sbjct 2937 TACAAATCCAAAAAACCCTGTTACAGTAATACGTGGCCTTGCTGGAGCTCTTAAATTAGATCTTGGACTTTTCT 3010
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3011 CTACCAAAACTTTGGTAGAAGCTAACAATGAACATATGGTAGAAGTGAGGACACAGTTGCTGCAACCAGCAGAT 3084
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3085 GAAAACTGGGATCCCACTGGAACAAAGAAAATCTGGCGTTGTGAAAGCAATAGATCTCATACTACAATTGCCAA 3158
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3159 ATACGCACAATACCAGGCTTCCTCCTTCCAGGAATCATTGAGAGAAGAAAATGAGAAAAGAACACAACACAAAG 3232
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3233 ATCATTCAGATAACGAATCCACATCTTCAGAGAATTCTGGAAGGAGAAGGAAAGGACCTTTTAAAACCATAAAA 3306
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3307 TTTGGGACCAACATTGACCTCTCTGATAACAAAAAGTGGAAGTTGCAGTTACATGAACTGACTAAACTTCCTGC 3380
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3381 TTTTGCGCGTGTGGTGTCAGCAGGAAATCTTCTAACCCATGTTGGGCATACCATTCTGGGCATGAATACAGTAC 3454
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3455 AACTGTATATGAAAGTTCCAGGGAGTCGGACACCAGGTCACCAAGAAAATAACAACTTCTGCTCTGTTAACATA 3528
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3529 AATATTGGTCCAGGAGATTGTGAATGGTTTGTTGTACCTGAAGATTATTGGGGTGTTCTGAATGACTTCTGTGA 3602
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3603 AAAAAATAATTTGAATTTTTTAATGAGTTCTTGGTGGCCCAACCTTGAAGATCTTTATGAAGCAAATGTCCCTG 3676
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3677 TGTATAGATTTATTCAGCGACCTGGAGATTTGGTCTGGATAAATGCAGGCACTGTGCATTGGGTTCAAGCTGTT 3750
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3751 GGCTGGTGCAATAACATTGCCTGGAATGTTGGTCCACTTACAGCCTGCCAGTATAAATTGGCAGTGGAACGGTA 3824
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3825 TGAATGGAACAAATTGAAAAGTGTGAAGTCACCAGTACCCATGGTGCATCTTTCCTGGAATATGGCACGAAATA 3898
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3899 TCAAAGTCTCAGATCCAAAGCTTTTTGAAATGATTAAGTATTGTCTTTTGAAAATTCTGAAGCAATATCAGACA 3972
Query 472 -------------------------------------------------------------------------- 471
Sbjct 3973 TTGAGAGAAGCTCTTGTTGCAGCAGGAAAAGAGGTTATATGGCATGGGCGGACAAATGATGAACCAGCTCATTA 4046
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4047 CTGTAGCATTTGTGAGGTGGAGGTTTTTAATCTGCTTTTTGTCACTAATGAAAGCAATACTCAAAAAACCTACA 4120
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4121 TAGTACATTGCCATGATTGTGCACGAAAAACAAGCAAAAGTTTGGAAAATTTTGTGGTGCTCGAACAGTACAAA 4194
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4195 ATGGAGGACCTAATCCAAGTTTATGATCAATTTACACTAGCTCTTTCATTATCATCCTCATCTTGATATAGTTC 4268
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4269 CATGAATATTAAATGAGATTATTTCTGCTCTTCAGGAAATTTCTGCACCACTGGTTTTGTAGCTGTTTCATAAA 4342
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4343 ACTGTTGACTAAAAGCTATGTCTATGCAACCTTCCAAGAATAGTATGTCAAGCAACTGGACACAGTGCTGCCTC 4416
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4417 TGCTTCAGGACTTAACATGCTGATCCAGCTGTACTTCAGAAAAATAATATTAATCATATGTTTTGTGTACGTAT 4490
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4491 GACAAACTGTCAAAGTGACACAGAATACTGATTTGAAGATAGCCTTTTTTATGTTTCTCTATTTCTGGGCTGAT 4564
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4565 GAATTAATATTCATTTGTATTTTAACCCTGCAGAATTTTCCTTAGTTAAAAACACTTTCCTAGCTGGTCATTTC 4638
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4639 TTCATAAGATAGCAAATTTAAATCTCTCCTCGATCAGCTTTTAAAAAATGTGTACTATTATCTGAGGAAGTTTT 4712
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4713 TTACTGCTTTATGTTTTTGTGTGTTTTGAGGCCATGATGATTACATTTGTGGTTCCAAAATAATTTTTTTAAAT 4786
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4787 ATTAATAGCCCATATACAAAGATAATGGATTGCACATAGACAAAGAAATAAACTTCAGATTTGTGATTTTTGTT 4860
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4861 TCTAAACTTGATACAGATTTACACTATTTATAAATACGTATTTATTGCCTGAAAATATTTGTGAATGGAATGTT 4934
Query 472 -------------------------------------------------------------------------- 471
Sbjct 4935 GTTTTTTTCCAGACGTAACTGCCATTAAATACTAAGGAGTTCTGTAGTTTTAAACACTACTCCTATTACATTTT 5008
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5009 ATATGTGTAGATAAAACTGCTTAGTATTATACAGAAATTTTTATTAAAATTGTTAAATGTTTAAAGGGTTTCCC 5082
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5083 AATGTTTGAGTTTAAAAAAGACTTTCTGAAAAAATCCACTTTTTGTTCATTTTCAAACCTAATGATTATATGTA 5156
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5157 TTTTATATGTGTGTGTATGTGTACACACATGTATAATATATACAGAAACCTCGATATATAATTGTATAGATTTT 5230
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5231 AAAAGTTTTATTTTTTACATCTATGGTAGTTTTTGAGGTGCCTATTATAAAGTATTACGGAAGTTTGCTGTTTT 5304
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5305 TAAAGTAAATGTCTTTTAGTGTGATTTATTAAGTTGTAGTCACCATAGTGATAGCCCATAAATAATTGCTGGAA 5378
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5379 AATTGTATTTTATAACAGTAGAAAACATATAGTCAGTGAAGTAAATATTTTAAAGGAAACATTATATAGATTTG 5452
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5453 ATAAATGTTGTTTATAATTAAGAGTTTCTTATGGAAAAGAGATTCAGAATGATAACCTCTTTTAGAGAACAAAT 5526
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5527 AAGTGACTTATTTTTTTAAAGCTAGATGACTTTGAAATGCTATACTGTCCTGCTTGTACAACATGGTTTGGGGT 5600
Query 472 -------------------------------------------------------------------------- 471
Sbjct 5601 GAAGGGGAGGAAAGTATTAAAAAATCTATATCGCTAGTAAATTGTAATAAGTTCTATTAAAACTTGTATTTCAT 5674
Query 472 --------------------------------------------------------------- 471
Sbjct 5675 ATGAAAAATTTGCTAATTTAATATTAACTCATTTGATAATAATACTTGTCTTTTCTACCTCTC 5737