Nucleotide Global Alignment
Description
- Query:
- TRCN0000479214
- Subject:
- NR_002939.3
- Aligned Length:
- 2076
- Identities:
- 828
- Gaps:
- 1160
Alignment
Query 1 ATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGTTGT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TTTGGAGAATCATGTAGTGACAGATGAAGACGAACCTGCTTTGAAACGCCAGCGACTAGAAATCAATTGCCAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATCCATCTATAAAGTCATTCCTGTATTCCATCAACCAGACAATCTGCTTGCGGTTGGATAGCATTGAAGCCAAA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TTGCAAGCCCTGGAGGCTACTTGTAAATCCTTAGAAGAAAAGCTGGATCTGGTCACGAACAAGCAGCACAGCCC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CATCCAGGTCCCCATGGTGGCCGGCTCCCCTCTCGGGGCAACCCAGACGTGCAACAAAGTGCGATGCGCTGTGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAG-CCACCACGAGGACGGGGAGAG 443
|| ||.|| |||.|..|||||
Sbjct 1 --------------------------------------------------AGTCCTCC----GGAGGCTGAGAG 20
Query 444 ----CGGCTCGGAGGCCAGCGACTCTGTGTCCAGCTGTGGGCAGGCGGGC-----------AGTCAGAGCATCG 502
||||| || |||..|...|||||.|| |||.|.||| |||.|...||||
Sbjct 21 CAAACGGCT-----GC-----ACTAGGAACCCAGCAGT---CAGACCGGCCCCCACCCTGGAGTGAACACATC- 80
Query 503 GGAGCAAC-GTCACGCTCATCACCCTGAACTCGGAAGAGGACTACCCCAATGGCACCTGGCTGGGCGACGAGAA 575
||.|| |.||.| ||||.| .|| |||||.||||||||||||||||||||||||||||||||
Sbjct 81 ---GCCACTGCCAGG--CATCGC--------AGG--GAGGATTACCCCAATGGCACCTGGCTGGGCGACGAGAA 139
Query 576 CAACCCCGAGATGCGGGTACGCTGCGCCATCATCCCCTCCGACATGCTGCACATCAGCACCAACTGCCGCACGG 649
||||||||||||||||||.|.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 140 CAACCCCGAGATGCGGGTGCACTGCGCCATCATCCCCTCCGACATGCTGCACATCAGCACCAACTGCCGCACGG 213
Query 650 CTGAGAAGATGGCGCTAACGCTGCTGGACTACCTCTTCCACCGCGAGGTGCAGGCTGTGTCCAACCTCTCGGGG 723
|.|||.||||||.|||.||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 214 CCGAGGAGATGGTGCTCACGCTGCTGGACTACCTCTTCCACCGCGAGGTGCAGGCTGTGTCCAGCCTCTCGGGG 287
Query 724 CAGGGCAAGCACGGGAAGAAGCAGCTGGACCCGCTCACCATCTACGGCATCCGGTGTCACCTTTTCTATAAATT 797
||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 288 CAGGGCAAGCACGGGAAGAAGCAGCTGGACCCGCTCACCATCTATGGCATCCGGTGTCACCTTTTCTATAAATT 361
Query 798 TGGCATCACAGAATCCGACTGGTACCGAATCAAGCAGAGCATCGACTCCAAGTGCCGCACGGCGTGGCGGCGCA 871
|||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 362 TGGCATCACAGAATCTGACTGGTACCGAATCAAGCAGAGCATCGACTCCAAGTGCCGCACGGCGTGGCGGCGCA 435
Query 872 AGCAGCGGGGCCAGAGCCTGGCGGTCAAGAGCTTCTCGCGGAGAACGCCCAACTCGTCCTCCTACTGCCCTTCA 945
|||||.|||||||||||||||.||||||||||||||||.||||||.|||||||||.||||||||||||||.|||
Sbjct 436 AGCAGTGGGGCCAGAGCCTGGTGGTCAAGAGCTTCTCGTGGAGAATGCCCAACTCATCCTCCTACTGCCCCTCA 509
Query 946 GAGCCGATGATGAGCACCCCACCTCCTGCCAGCGAGCTCCCGCAGCCACAGCCGCAGCCGCAGGCCCTGCACTA 1019
||||||||||||||||||||||||||||||||.|||||||.|||||||||||.|||||||||||||||||||||
Sbjct 510 GAGCCGATGATGAGCACCCCACCTCCTGCCAGAGAGCTCCTGCAGCCACAGCTGCAGCCGCAGGCCCTGCACTA 583
Query 1020 CGCGCTGGCCAACGCACAGCAGGTGCAGATCCACCAGATCGGAGAAGACGGACAGGTGCAAGTAATCCCACAGG 1093
||||||||||||||..|||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 584 CGCGCTGGCCAACGTGCAGCAGGTGCAGATCCACCAGATCGGAGAAGACGGACAGGTGCAAGTA---------G 648
Query 1094 GACACCTCCACATCGCCCAGGTGCCGCAGGGGGAGCAAGTCCAGATCACGCAGGACAGCGAGGG---------- 1157
|||||||||||||||||.|||||||.||||||||||||||||||||||||||||||||||||.|
Sbjct 649 GACACCTCCACATCGCCAAGGTGCCACAGGGGGAGCAAGTCCAGATCACGCAGGACAGCGAGAGCCCGTGTTCT 722
Query 1158 ----------------------CAAC-------------------------------CTCCAGATC-CATC--A 1175
|||| |.|||.||| |.|| |
Sbjct 723 GGTACTACGTGAAGGAGGTCCTCAACAAGCACGAGCTGCAAGCGCTTCTACTCCCTGCGCCACATCGCCTCAGA 796
Query 1176 CGTGGGGCAGGACGGTCAGGT-GCTGCAGGGTGC---------ACAGCT-----GATCGC--------CGTGGC 1226
||||||.|.||.|.| ||..| |||||...|||| ||| || ||.||| |.||
Sbjct 797 CGTGGGCCGGGGCCG-CACCTGGCTGCGCTGTGCCCTCAACGAACA-CTCCCTGGAGCGCTACCTGCACATG-- 866
Query 1227 CTCCT--CGGACCCCGCGGCGGCGGGC--------------------------------GTGGATG------GG 1260
||||| |.|||| ||.||.||| .|||||| ||
Sbjct 867 CTCCTGGCCGACC-----GCTGCAGGCTCAGTACTTTTTATGAAGACTGGTCTTTTGTGATGGATGAAGAGAGG 935
Query 1261 TCGCCACT----------CCAGGGCAGC----------------------------------GACATCCAGGTT 1290
| |||.| |||.|||||| ||||.|.|||.|
Sbjct 936 T--CCAGTATGCTTCCTACCATGGCAGCAGGTCCGAACTCCATACTCTTTGCGATTAACATTGACAACAAGGAT 1007
Query 1291 CAGTACGTGCAGCTGGCGCCAGTGAGT-----------------GACCAC---ACGGCCGGGGCACAG---ACG 1341
..|.|||.|||| |||.||| ||||.| |.|| || ||
Sbjct 1008 TTGAACGGGCAG--------AGTAAGTTTGCTCCCACCGTTTCAGACCTCTTAAAGG---------AGTCAAC- 1063
Query 1342 GCCGAA---GCCCT-------GCAGCCCACGCTA--------CAGC-------CGGAGAT-------------- 1376
||.||| |.||| |.||.||||||.| |||| .||||||
Sbjct 1064 GCAGAATGTGACCTTGCTGAAGGAGTCCACGCAAGGAGTGAGCAGCGTGTTCAGGGAGATCACAGCCTCCTCTG 1137
Query 1377 GCAGCTC----------------GAGCACGGGGCC-----------------ATCCAG--AT-TCAG------- 1407
.||.||| ||.||.|.|.|| .||||| || ||||
Sbjct 1138 CCATCTCCATCCTCATCAAACCTGAACAGGAGACCGACCCCTTGCCCGTCGTGTCCAGGAATGTCAGTGCTGAT 1211
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 1212 GCCAAATGCAAAAAGGAGCGGAAGAAGAAAAAGCAAGTGACCAACATTATCTCATTTGATGATGAGGAAGATGA 1285
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 1286 GCAGAACTCTGGGGACATGTTTAAAAAGACACCTGGGGCAGGGGAGAGCTCAGAGGACAACTCCGACCACTCCT 1359
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 1360 CTGTCAATATCATGTCCGCCTTTGAAAGCCCCTTCGGGCCAAACTCCAATGGAAGTCAGAGCAGCAACTCGTGG 1433
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 1434 AAAATTGATTCCCTGTCTTTGAACAGGGAGTTTGGGTACCAGAAGCTTGATGTGAAAAGCATCGATGATGAAGA 1507
Query 1408 -------------------------------------------------------------------------- 1407
Sbjct 1508 TGTGGATGAAAACGAAGATGACGTGTATGGAAACTCATCAGGACGGAAGCACAGGGGCCACTCAGAGTCGCCCG 1581
Query 1408 ---- 1407
Sbjct 1582 AGAA 1585
