Nucleotide Global Alignment

Description

Query:
TRCN0000479222
Subject:
XR_001746225.1
Aligned Length:
3859
Identities:
952
Gaps:
2896

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGCTGGGCGCGGGGCTGCGGTGCCCAGAGGCTGCGGCATTAGGGGCTCGGCGCCCCCGACCTTCCGCGTCCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGGTGGCGGCGGCGGCGGCGGCGGCGGCGCGGGCGGCATATGATGCTGAGCTGGCTGCTCCAGAATGAACCACA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCTCTGAGAAGGGGAAGTAGAAACAGCTGGCGCCCTGCCATGGCCTGTGAACCACAGGTGGACCCGGGGGCCAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGGCCCATTGCCCCCCTCCTCCCCTGGCTGGAGTGCCCTGCCTGGAGGGAGCCCTCCTGGCTGGGGGCAAGCCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCATAGAGAATATGCCAAAATATCCAGTCCTCAGCAGTGCATGGCTGAAACCTGGGATCCTAGAATCCCAGGGC  370

Query    1  -------------------------------ATGGTTATCA----CTCA----GCC------------------  17
                                           .||.|.|.||    ||||    |||                  
Sbjct  371  TGGAATCTCTCCCACCCCCCAGACCTCCTGGCTGCTGACCAGTGGCTCACAGGGCCTTGTACTGTGGTGCAAGG  444

Query   18  AGAT---GAAGCTTCTGGTCTGCTTC------------------CAGAGCTCCACAATGGCCAGGTCCTCACTG  70
            ||||   ||..|||.||..|.|.|||                  ||||||||||||||||||||||||||||||
Sbjct  445  AGATCTCGATCCTTTTGTCCAGTTTCTCTACTTGGAACTGCAGGCAGAGCTCCACAATGGCCAGGTCCTCACTG  518

Query   71  TTCTCCGGATTGACAATACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGG  144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TTCTCCGGATTGACAATACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGG  592

Query  145  GGCATC---CAGGTCCCGGCTGACCAGTACAGGAGCTTGGCTGAGAGTGCCCTCTTGGAGCCCCAAGTGAGAAG  215
            ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GGCATCCAGCAGGTCCCGGCTGACCAGTACAGGAGCTTGGCTGAGAGTGCCCTCTTGGAGCCCCAAGTGAGAAG  666

Query  216  ATATATCATCTACAACTCGAGGCCTATGCGGCTGGCCTTTGCTGTGGTTTTCTATGTGGTGGTGTGGGCCAATA  289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ATATATCATCTACAACTCGAGGCCTATGCGGCTGGCCTTTGCTGTGGTTTTCTATGTGGTGGTGTGGGCCAATA  740

Query  290  TCTACTCTACCAGTCAGATGTTTGCCTTGGGGAACCACTGGGCTGGCATGCTGCTCGTGACCCTGGCCGCGGTG  363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TCTACTCTACCAGTCAGATGTTTGCCTTGGGGAACCACTGGGCTGGCATGCTGCTCGTGACCCTGGCCGCGGTG  814

Query  364  AGCCTGACCTTGACTCTTGTGCTGGTCTTTGAAAGACACCAGAAGAAGGCCAACACCAACACGGACCTGAGGCT  437
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGCCTGACCTTGACTCTTGTGCTGGTCTTTGAAAGACACCAGAAGAAGGCCAACACCAACACGGACCTGAGGCT  888

Query  438  GGCAGCTGCCAATGGAGCCCTCCTGAGACACCGGGTGCTGCTGGGGGTGACAGACACAGTGGAAGGATGCCAGA  511
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GGCAGCTGCCAATGGAGCCCTCCTGAGACACCGGGTGCTGCTGGGGGTGACAGACACAGTGGAAGGATGCCAGA  962

Query  512  GTGTGATTCAGCTTTGGTTTGTCTACTTCGACCTGGAGAACTGTGTGCAGTTTTTGTCTGATCATGTTCAAGAA  585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GTGTGATTCAGCTTTGGTTTGTCTACTTCGACCTGGAGAACTGTGTGCAGTTTTTGTCTGATCATGTTCAAGAA  1036

Query  586  ATGAAGACTAGCCAAGAGTCCTTGCTGAGAAGCAGATTGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGAG  659
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ATGAAGACTAGCCAAGAGTCCTTGCTGAGAAGCAGATTGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGAG  1110

Query  660  CCCTGCAACAGCGGAGGGGCCTGAGAACTTGGAGGATGCTCCTCTCCTGCCCGGCAATTCTTGTCCTAACGAGA  733
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CCCTGCAACAGCGGAGGGGCCTGAGAACTTGGAGGATGCTCCTCTCCTGCCCGGCAATTCTTGTCCTAACGAGA  1184

Query  734  GGCCACTCATGCAGACTGAGCTTCATCAGCTTGTTCCTGAGGCTGAGCCGGAGGAAATGGCCCGCCAGCTGCTG  807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GGCCACTCATGCAGACTGAGCTTCATCAGCTTGTTCCTGAGGCTGAGCCGGAGGAAATGGCCCGCCAGCTGCTG  1258

Query  808  GCAGTGTTTGGCGGCTACTACATCCGGCTTCTAGTGACCTCCCAGCTCCCTCAGGCAATGGGGACACGACACAC  881
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GCAGTGTTTGGCGGCTACTACATCCGGCTTCTAGTGACCTCCCAGCTCCCTCAGGCAATGGGGACACGACACAC  1332

Query  882  GAACTCTCCGAGAATTCCATGCCCCTGCCAGCTCATAGAAGCCTACATCCTAGGCACAGGGTGCTGCCCGTTCC  955
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GAACTCTCCGAGAATTCCATGCCCCTGCCAGCTCATAGAAGCCTACATCCTAGGCACAGGGTGCTGCCCGTTCC  1406

Query  956  TGGCGAGG------------------------------------------------------------------  963
            ||||||||                                                                  
Sbjct 1407  TGGCGAGGTGACCTAGGGATGAAGGTACTCATCTTCCTTCAAGACTGAGCAGTCAGGAAGGCTTCAGGAGCCCA  1480

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1481  AGATGGCCAATGGGGAGCCCCAGATGTAGAACAATGGTTATGTTTCCCGACATGAACATTGTCCTGGAATGAAG  1554

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1555  TGTGATCAGCCACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAACAAGTTTGAA  1628

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1629  GACCTATTGTTTCATAGACCCAAGACCAAACGCATCTAAAGGATCCCCAGCCCCCAAGACCTAGCCTTTGTCTG  1702

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1703  CGATTTTGGCTTCATCTCCCACAAAACCCCTTTATGAGTTCACGCTCTTTCCTGGACTGACATACCTATTCCTT  1776

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1777  TCCATTTGTTGGACTCCTATTCATGCTTCAAAGTCCAGCTTTCTTAAGCCCTTCTTTAGGAAGCCTTCCCACAC  1850

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1851  AGCCAACCCTGCTGCTCTCTGCCTCCTTTAAATTCTTGATACAGCTGCTGCTTGTTCTGATGTTTTATGGTATT  1924

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1925  GATTCTGTTTTCCTGTGTATATGCCAGTTTTTCTAGCTAGACTGTAAACTCCTTAAGGACAGAGACTACACCTT  1998

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1999  GTACTTTTTGTGCATGACCTGGACCTGCTAAGGAAAAAAAAATCTTGTGGATTGATTGCTTTGCCATCCCCACA  2072

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2073  GCAGCTTTTGCAAATTGCTTTCCAAACTCACTTGAATGATGACATTGCTGTGGACCTGGGTTCTGGACCTGATC  2146

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2147  TGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGGTCCTCAGTTTGCCCATCAATATAATG  2220

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2221  GGTGGATTGGATGATTTTTTTTTTTTTAATTGAGATGGAGTCTTGCACTGTCACCCAGGCTGGAGTGCAGTGGC  2294

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2295  GCGATCTTGGCTCACTGCAACCCCCGCCACCTAGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGG  2368

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2369  GACTACAGGTGTGCACCACTACTCCTGGATATTTTTTTGTGTTTTTAGTAGAGATGGGGTTTCGCCATGTTGGC  2442

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2443  CAAGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCCGCCTCGGGCTCCCAAAGTGCTGGGATTACAGACGT  2516

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2517  GAGGCACCACAACCAGCCTGGATGATTCTTAAGGGCCCTTCTAGGACCAAAGTTCTGGGAATTTCTAGCTTATT  2590

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2591  CTGCCCCCTCATAGCCCTTGGCCTATCTATCTTTATCCACATGCAGAAACATCTGGCAACCCCACATGGCTGAG  2664

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2665  ATGACCTGGTCCTAGGACACCCTTGGACAGAAGACTGGCCTACCTAGCAGACCTGGATTTTTCTTCCTGATCTG  2738

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2739  CTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGATTGTCATTTCGCTTTTTAATAAAGTGG  2812

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2813  GTCTGGTGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACCATTCACTTTCTGTG  2886

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2887  TGCCAGAGAAGAGAGATCATGGGTATAGACCAGCCCCTGGAAAGGCTGCTTTGGTCAAGGCTGAGAGCAGCTTT  2960

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 2961  GCTCAAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAATGTTGGCTGTGAATGT  3034

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3035  GACCAATAGAAAGAAGCCCGTATTTCTCAGTCAGTCCTAGAACCCCGGTAAGTAATTAACAGAGAATAAAAATG  3108

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3109  TGTTTGTTAAATGACAAAGCAGCAGTTTTTCAATTGTAAGGTCTGCTTGAGAGCCTTTGATGTGTGTTTCTTTT  3182

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3183  CCTGACTTTTCCTTTCTTTAGAATTTTTGATGGTCTCACCTGGTGGGTGGGGCTTTCAGGGTATGCCCACAATG  3256

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3257  TACATTTCTCGGCATCTGTGCCTCAGTTTCCTCATTTATAAAATCCCTATGATCTCTGTCTCACCTACTTTACA  3330

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3331  GGGTTGCTGTGAAGATCGCATACTACACACAGGAATGCTCATCAGTTTTTAAATTTTATTTAATTTTTATTTAT  3404

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3405  TTTTTTTTAAATGTAATTTTTTCAGAGAGATAAGGTCTTGCTATGTTACCCAGCCTAGTCTTGAACTCCTGGCC  3478

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3479  TCAAGTGATCCTCCTGCCTTGGCCTCCCATGCTGCTGGGATTACAGGTGTGAACTACCATGCCCAGCCAGCTCC  3552

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3553  TAAGTCTTAAGGCTCTGTGTTAGTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGA  3626

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3627  AGGTGGTAACTCATTGCATGGATTCTAGAGTTCTGTTTATTCTAATCCAAGTTCTTCCACTTAAAAACAATGTT  3700

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3701  CTTCCTCTCATTGAGTCTCATTCCTCATCTATAGGATGGGAATAAGAGCATGTACCTGGCAGGTTGTTGTAAGG  3774

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 3775  ATTAAATGGTGTAAAAAAATGTCAAGTGCTTGCAACTTTGAATACCAAACTTGAGTGAAAGCTCAATAAATTGT  3848

Query  964  -----------  963
                       
Sbjct 3849  TACTTAAAAAA  3859

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