Nucleotide Global Alignment
Description
- Query:
- TRCN0000479222
- Subject:
- XR_001746225.1
- Aligned Length:
- 3859
- Identities:
- 952
- Gaps:
- 2896
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGCTGGGCGCGGGGCTGCGGTGCCCAGAGGCTGCGGCATTAGGGGCTCGGCGCCCCCGACCTTCCGCGTCCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGTGGCGGCGGCGGCGGCGGCGGCGGCGCGGGCGGCATATGATGCTGAGCTGGCTGCTCCAGAATGAACCACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTCTGAGAAGGGGAAGTAGAAACAGCTGGCGCCCTGCCATGGCCTGTGAACCACAGGTGGACCCGGGGGCCAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGCCCATTGCCCCCCTCCTCCCCTGGCTGGAGTGCCCTGCCTGGAGGGAGCCCTCCTGGCTGGGGGCAAGCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCATAGAGAATATGCCAAAATATCCAGTCCTCAGCAGTGCATGGCTGAAACCTGGGATCCTAGAATCCCAGGGC 370
Query 1 -------------------------------ATGGTTATCA----CTCA----GCC------------------ 17
.||.|.|.|| |||| |||
Sbjct 371 TGGAATCTCTCCCACCCCCCAGACCTCCTGGCTGCTGACCAGTGGCTCACAGGGCCTTGTACTGTGGTGCAAGG 444
Query 18 AGAT---GAAGCTTCTGGTCTGCTTC------------------CAGAGCTCCACAATGGCCAGGTCCTCACTG 70
|||| ||..|||.||..|.|.||| ||||||||||||||||||||||||||||||
Sbjct 445 AGATCTCGATCCTTTTGTCCAGTTTCTCTACTTGGAACTGCAGGCAGAGCTCCACAATGGCCAGGTCCTCACTG 518
Query 71 TTCTCCGGATTGACAATACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGG 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTCTCCGGATTGACAATACCTGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGG 592
Query 145 GGCATC---CAGGTCCCGGCTGACCAGTACAGGAGCTTGGCTGAGAGTGCCCTCTTGGAGCCCCAAGTGAGAAG 215
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGCATCCAGCAGGTCCCGGCTGACCAGTACAGGAGCTTGGCTGAGAGTGCCCTCTTGGAGCCCCAAGTGAGAAG 666
Query 216 ATATATCATCTACAACTCGAGGCCTATGCGGCTGGCCTTTGCTGTGGTTTTCTATGTGGTGGTGTGGGCCAATA 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATATATCATCTACAACTCGAGGCCTATGCGGCTGGCCTTTGCTGTGGTTTTCTATGTGGTGGTGTGGGCCAATA 740
Query 290 TCTACTCTACCAGTCAGATGTTTGCCTTGGGGAACCACTGGGCTGGCATGCTGCTCGTGACCCTGGCCGCGGTG 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCTACTCTACCAGTCAGATGTTTGCCTTGGGGAACCACTGGGCTGGCATGCTGCTCGTGACCCTGGCCGCGGTG 814
Query 364 AGCCTGACCTTGACTCTTGTGCTGGTCTTTGAAAGACACCAGAAGAAGGCCAACACCAACACGGACCTGAGGCT 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGCCTGACCTTGACTCTTGTGCTGGTCTTTGAAAGACACCAGAAGAAGGCCAACACCAACACGGACCTGAGGCT 888
Query 438 GGCAGCTGCCAATGGAGCCCTCCTGAGACACCGGGTGCTGCTGGGGGTGACAGACACAGTGGAAGGATGCCAGA 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGCAGCTGCCAATGGAGCCCTCCTGAGACACCGGGTGCTGCTGGGGGTGACAGACACAGTGGAAGGATGCCAGA 962
Query 512 GTGTGATTCAGCTTTGGTTTGTCTACTTCGACCTGGAGAACTGTGTGCAGTTTTTGTCTGATCATGTTCAAGAA 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GTGTGATTCAGCTTTGGTTTGTCTACTTCGACCTGGAGAACTGTGTGCAGTTTTTGTCTGATCATGTTCAAGAA 1036
Query 586 ATGAAGACTAGCCAAGAGTCCTTGCTGAGAAGCAGATTGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGAG 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATGAAGACTAGCCAAGAGTCCTTGCTGAGAAGCAGATTGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGAG 1110
Query 660 CCCTGCAACAGCGGAGGGGCCTGAGAACTTGGAGGATGCTCCTCTCCTGCCCGGCAATTCTTGTCCTAACGAGA 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCCTGCAACAGCGGAGGGGCCTGAGAACTTGGAGGATGCTCCTCTCCTGCCCGGCAATTCTTGTCCTAACGAGA 1184
Query 734 GGCCACTCATGCAGACTGAGCTTCATCAGCTTGTTCCTGAGGCTGAGCCGGAGGAAATGGCCCGCCAGCTGCTG 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGCCACTCATGCAGACTGAGCTTCATCAGCTTGTTCCTGAGGCTGAGCCGGAGGAAATGGCCCGCCAGCTGCTG 1258
Query 808 GCAGTGTTTGGCGGCTACTACATCCGGCTTCTAGTGACCTCCCAGCTCCCTCAGGCAATGGGGACACGACACAC 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GCAGTGTTTGGCGGCTACTACATCCGGCTTCTAGTGACCTCCCAGCTCCCTCAGGCAATGGGGACACGACACAC 1332
Query 882 GAACTCTCCGAGAATTCCATGCCCCTGCCAGCTCATAGAAGCCTACATCCTAGGCACAGGGTGCTGCCCGTTCC 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GAACTCTCCGAGAATTCCATGCCCCTGCCAGCTCATAGAAGCCTACATCCTAGGCACAGGGTGCTGCCCGTTCC 1406
Query 956 TGGCGAGG------------------------------------------------------------------ 963
||||||||
Sbjct 1407 TGGCGAGGTGACCTAGGGATGAAGGTACTCATCTTCCTTCAAGACTGAGCAGTCAGGAAGGCTTCAGGAGCCCA 1480
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1481 AGATGGCCAATGGGGAGCCCCAGATGTAGAACAATGGTTATGTTTCCCGACATGAACATTGTCCTGGAATGAAG 1554
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1555 TGTGATCAGCCACTTGTGGAATTCTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAACAAGTTTGAA 1628
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1629 GACCTATTGTTTCATAGACCCAAGACCAAACGCATCTAAAGGATCCCCAGCCCCCAAGACCTAGCCTTTGTCTG 1702
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1703 CGATTTTGGCTTCATCTCCCACAAAACCCCTTTATGAGTTCACGCTCTTTCCTGGACTGACATACCTATTCCTT 1776
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1777 TCCATTTGTTGGACTCCTATTCATGCTTCAAAGTCCAGCTTTCTTAAGCCCTTCTTTAGGAAGCCTTCCCACAC 1850
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1851 AGCCAACCCTGCTGCTCTCTGCCTCCTTTAAATTCTTGATACAGCTGCTGCTTGTTCTGATGTTTTATGGTATT 1924
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1925 GATTCTGTTTTCCTGTGTATATGCCAGTTTTTCTAGCTAGACTGTAAACTCCTTAAGGACAGAGACTACACCTT 1998
Query 964 -------------------------------------------------------------------------- 963
Sbjct 1999 GTACTTTTTGTGCATGACCTGGACCTGCTAAGGAAAAAAAAATCTTGTGGATTGATTGCTTTGCCATCCCCACA 2072
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2073 GCAGCTTTTGCAAATTGCTTTCCAAACTCACTTGAATGATGACATTGCTGTGGACCTGGGTTCTGGACCTGATC 2146
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2147 TGCCACTTCAAGCTGTGTAATTTTTGGCAAGTTGCTTTCTTTGCCTGGTCCTCAGTTTGCCCATCAATATAATG 2220
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2221 GGTGGATTGGATGATTTTTTTTTTTTTAATTGAGATGGAGTCTTGCACTGTCACCCAGGCTGGAGTGCAGTGGC 2294
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2295 GCGATCTTGGCTCACTGCAACCCCCGCCACCTAGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGG 2368
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2369 GACTACAGGTGTGCACCACTACTCCTGGATATTTTTTTGTGTTTTTAGTAGAGATGGGGTTTCGCCATGTTGGC 2442
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2443 CAAGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCCGCCTCGGGCTCCCAAAGTGCTGGGATTACAGACGT 2516
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2517 GAGGCACCACAACCAGCCTGGATGATTCTTAAGGGCCCTTCTAGGACCAAAGTTCTGGGAATTTCTAGCTTATT 2590
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2591 CTGCCCCCTCATAGCCCTTGGCCTATCTATCTTTATCCACATGCAGAAACATCTGGCAACCCCACATGGCTGAG 2664
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2665 ATGACCTGGTCCTAGGACACCCTTGGACAGAAGACTGGCCTACCTAGCAGACCTGGATTTTTCTTCCTGATCTG 2738
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2739 CTGCTTCCAAGTTGTGTGACCTTGGCTAAGTCACTTAACCTTTCTGATTGTCATTTCGCTTTTTAATAAAGTGG 2812
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2813 GTCTGGTGAACAAGAAATGTAATAAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACCATTCACTTTCTGTG 2886
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2887 TGCCAGAGAAGAGAGATCATGGGTATAGACCAGCCCCTGGAAAGGCTGCTTTGGTCAAGGCTGAGAGCAGCTTT 2960
Query 964 -------------------------------------------------------------------------- 963
Sbjct 2961 GCTCAAGGAAATTATTCACGAAGGTGACCACTGTCTTTCTGACCTGGCACAGAGGAAATGTTGGCTGTGAATGT 3034
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3035 GACCAATAGAAAGAAGCCCGTATTTCTCAGTCAGTCCTAGAACCCCGGTAAGTAATTAACAGAGAATAAAAATG 3108
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3109 TGTTTGTTAAATGACAAAGCAGCAGTTTTTCAATTGTAAGGTCTGCTTGAGAGCCTTTGATGTGTGTTTCTTTT 3182
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3183 CCTGACTTTTCCTTTCTTTAGAATTTTTGATGGTCTCACCTGGTGGGTGGGGCTTTCAGGGTATGCCCACAATG 3256
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3257 TACATTTCTCGGCATCTGTGCCTCAGTTTCCTCATTTATAAAATCCCTATGATCTCTGTCTCACCTACTTTACA 3330
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3331 GGGTTGCTGTGAAGATCGCATACTACACACAGGAATGCTCATCAGTTTTTAAATTTTATTTAATTTTTATTTAT 3404
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3405 TTTTTTTTAAATGTAATTTTTTCAGAGAGATAAGGTCTTGCTATGTTACCCAGCCTAGTCTTGAACTCCTGGCC 3478
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3479 TCAAGTGATCCTCCTGCCTTGGCCTCCCATGCTGCTGGGATTACAGGTGTGAACTACCATGCCCAGCCAGCTCC 3552
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3553 TAAGTCTTAAGGCTCTGTGTTAGTGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGA 3626
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3627 AGGTGGTAACTCATTGCATGGATTCTAGAGTTCTGTTTATTCTAATCCAAGTTCTTCCACTTAAAAACAATGTT 3700
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3701 CTTCCTCTCATTGAGTCTCATTCCTCATCTATAGGATGGGAATAAGAGCATGTACCTGGCAGGTTGTTGTAAGG 3774
Query 964 -------------------------------------------------------------------------- 963
Sbjct 3775 ATTAAATGGTGTAAAAAAATGTCAAGTGCTTGCAACTTTGAATACCAAACTTGAGTGAAAGCTCAATAAATTGT 3848
Query 964 ----------- 963
Sbjct 3849 TACTTAAAAAA 3859
