Construct: ORF TRCN0000479222

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010293.1_s317c1
Derived from:
ccsbBroadEn_13399
DNA Barcode:
TCAAGCATTTAAGTTGAAATTCCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMEM268 (203197)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000479222
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 203197 TMEM268 transmembrane protein 268 XM_011518355.1 100% 100%
2 human 203197 TMEM268 transmembrane protein 268 XM_011518354.1 99.6% 99.6% 151_153delCAG
3 human 203197 TMEM268 transmembrane protein 268 NM_153045.4 91.8% 90.9% (many diffs)
4 human 203197 TMEM268 transmembrane protein 268 XM_024447441.1 91.8% 90.9% (many diffs)
5 human 203197 TMEM268 transmembrane protein 268 NM_001330760.2 91.5% 90.6% (many diffs)
6 human 203197 TMEM268 transmembrane protein 268 XM_017014430.1 88.4% 88.4% 409_410ins111
7 human 203197 TMEM268 transmembrane protein 268 XM_011518352.1 77.7% 75.6% (many diffs)
8 human 203197 TMEM268 transmembrane protein 268 XM_011518350.1 77.5% 75.4% (many diffs)
9 human 203197 TMEM268 transmembrane protein 268 XM_011518351.2 77.5% 75.4% (many diffs)
10 human 203197 TMEM268 transmembrane protein 268 XM_017014429.2 77.5% 75.4% (many diffs)
11 human 203197 TMEM268 transmembrane protein 268 XM_011518353.1 68.5% 66.5% (many diffs)
12 human 203197 TMEM268 transmembrane protein 268 XR_001746226.1 25.6% (many diffs)
13 human 203197 TMEM268 transmembrane protein 268 XR_001746225.1 24.6% (many diffs)
14 mouse 230279 Tmem268 transmembrane protein 268 NM_144905.3 81.3% 81.9% (many diffs)
15 mouse 230279 Tmem268 transmembrane protein 268 XM_006537866.2 81.3% 81.9% (many diffs)
16 mouse 230279 Tmem268 transmembrane protein 268 XM_006537867.2 81.3% 81.9% (many diffs)
17 mouse 230279 Tmem268 transmembrane protein 268 XM_006537868.3 81.3% 81.9% (many diffs)
18 mouse 230279 Tmem268 transmembrane protein 268 XM_006537869.1 81.3% 81.9% (many diffs)
19 mouse 230279 Tmem268 transmembrane protein 268 XM_006537870.3 81.3% 81.9% (many diffs)
20 mouse 230279 Tmem268 transmembrane protein 268 XM_006537871.3 81.3% 81.9% (many diffs)
21 mouse 230279 Tmem268 transmembrane protein 268 XM_006537872.3 81.3% 81.9% (many diffs)
22 mouse 230279 Tmem268 transmembrane protein 268 XM_006537873.3 81.3% 81.9% (many diffs)
23 mouse 230279 Tmem268 transmembrane protein 268 XM_011250009.2 81.3% 81.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1032
ORF length:
963
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggttatcact cagccagatg aagcttctgg tctgcttcca gagctccaca
121atggccaggt cctcactgtt ctccggattg acaatacctg tgcacccatc tccttcgacc
181tgggagccgc agaagagcaa ctgcaaactt ggggcatcca ggtcccggct gaccagtaca
241ggagcttggc tgagagtgcc ctcttggagc cccaagtgag aagatatatc atctacaact
301cgaggcctat gcggctggcc tttgctgtgg ttttctatgt ggtggtgtgg gccaatatct
361actctaccag tcagatgttt gccttgggga accactgggc tggcatgctg ctcgtgaccc
421tggccgcggt gagcctgacc ttgactcttg tgctggtctt tgaaagacac cagaagaagg
481ccaacaccaa cacggacctg aggctggcag ctgccaatgg agccctcctg agacaCCGGG
541TGCTGCTGGG GGTGACAGAC ACAGTGGAAG GATGCCAGAG TGTGATTCAG CTTTGGTTTG
601TCTACTTCGA CCTGGAGAAC TGTGTGCAGT TTTTGTCTGA TCATGTTCAA GAAATGAAGA
661CTAGCCAAGA GTCCTTGCTG AGAAGCAGAT TGAGCCAGTT GTGTGTTGTC ATGGAGACTG
721GGGTGAGCCC TGCAACAGCG GAGGGGCCTG AGAACTTGGA GGATGCTCCT CTCCTGCCCG
781GCAATTCTTG TCCTAACGAG AGGCCACTCA TGCAGACTGA GCTTCATCAG CTTGTTCCTG
841AGGCTGAGCC GGAGGAAATG GCCCGCCAGC TGCTGGCAGT GTTTGGCGGC TACTACATCC
901GGCTTCTAGT GACCTCCCAG CTCCCTCAGG CAATGGGGAC ACGACACACG AACTCTCCGA
961GAATTCCATG CCCCTGCCAG CTCATAGAAG CCTACATCCT AGGCACAGGG TGCTGCCCGT
1021TCCTGGCGAG GTTGCCAACT TTCTTGTACA AAGTGGTTGA TATCGGTAAG CCTATCCCTA
1081ACCCTCTCCT CGGTCTCGAT TCTACGTAGT AATGAACTAG TCCGTAACTT GAAAGTATTT
1141CGATTTCTTG GCTTTATATA TCTTGTGGAA AGGACGATCA AGCATTTAAG TTGAAATTCC
1201TACGCGTTAA GTCgacaatc aacctctgga ttacaaaatt tgtgaaagat t

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