Nucleotide Global Alignment
Description
- Query:
- TRCN0000479266
- Subject:
- NR_051991.1
- Aligned Length:
- 5134
- Identities:
- 1929
- Gaps:
- 3202
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGGGAGCCTGGTCCAGGAGACTGTGTCGGACCCGGTCAGCCGGCCCGGGCTGGACTGGGCGGAAGCGGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCACTGTGGGGCCGGCGCCTTTTCCTCTGCCCCGCCCCCTGGGACCACCTCCCCTCCCCCCTGCTGTCCGGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCGCGCTGTGGCCGCCGGTGGCCGTTAGGCTACCTGAGGCCGTTCCTTCTGGTCTCTCTCTCCTGGGCCGCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGAGACCGTCTCCCTGCCGTTACAGCAGGCCCCATCCCAGCGCCCAGCCGTACTTGGGGAAAGGCCGGTTGCGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTCCGGGGCTTTCCCGCCAGAGCTGGGTCTTCTCTGGGGAGAGCTGTTTTCACCGGGAAGCTCGGCTTTCTGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTACCGGCTTCATCTCCCGCCTTCCTTGAGACCCGAGTGATATTTCTTGACTACTTCTGCGTCTCACGTAAACA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTCTCCAACTCTCCTACTCTGTGGTATCTCCCTGAGATGTGATATCGCTAGTGCCACCATCAGAAAGAAACGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGGACCCTCCTGCTCAGGTTATGAAAATCCCCTTAACTGCCACAATTTGCTTACCTGGCTCATCGCCTCCTGG 592
Query 1 -------------------------------------------ATGGATGATATTGCTGATAGGATGAGGATGG 31
|||||||||||||||||||||||||||||||
Sbjct 593 ACTTTGTATCTTTGCTAAAGTCAGTGATGTGAAAAGACTTGAAATGGATGATATTGCTGATAGGATGAGGATGG 666
Query 32 ATGCTGGAGAAGTGACTTTAGTGAACCACAACTCCGTATTCAAAACCCACCTCCTGCCACAAACAGGTTTTCCA 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATGCTGGAGAAGTGACTTTAGTGAACCACAACTCCGTATTCAAAACCCACCTCCTGCCACAAACAGGTTTTCCA 740
Query 106 GAGGACCAGCTTTCGCTTTCTGACCAGCAGATTTTATCTTCCAGGCAAGGACATTTGGACCGATCTTTTACATG 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GAGGACCAGCTTTCGCTTTCTGACCAGCAGATTTTATCTTCCAGGCAAGGACATTTGGACCGATCTTTTACATG 814
Query 180 TTCCACAAGAAGTGCAGCTTATAATCCAAGCTATTAC------------------------------------- 216
|||||||||||||||||||||||||||||||||||||
Sbjct 815 TTCCACAAGAAGTGCAGCTTATAATCCAAGCTATTACTCAGGCCCAGGCCTGGGAGTGCTTGCAAGATATAGTT 888
Query 217 -------------------------------------------------------------------------- 216
Sbjct 889 GGGGTAAAATGTTGACTTTTGGTGGACACCACGGAGTCACATTGATGCAGATAAGGCACATGGCTGTGGCAGGA 962
Query 217 --------------------TCAGATAATCCTTCCTCAGACAGTTTTCTTGGCTCAGGCGATTTAAGAACCTTT 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TTCAGCTCCTTCATCAATTTTCAGATAATCCTTCCTCAGACAGTTTTCTTGGCTCAGGCGATTTAAGAACCTTT 1036
Query 271 GGCCAGAGTGCAAATGGCCAATGGAGAAATTCTACCCCATCGTCAAGCTCATCTTTACAAAAATCAAGAAACAG 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGCCAGAGTGCAAATGGCCAATGGAGAAATTCTACCCCATCGTCAAGCTCATCTTTACAAAAATCAAGAAACAG 1110
Query 345 CCGAAGTCTTTACCTCGAAACCCGAAAGACCTCAAGTGGATTATCAAACAGTTTTGCGGGAAAGTCAAACCATC 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCGAAGTCTTTACCTCGAAACCCGAAAGACCTCAAGTGGATTATCAAACAGTTTTGCGGGAAAGTCAAACCATC 1184
Query 419 ACTGCCATGTATCTGCATATGAAAAATCTTTTCCTATTAAACCTGTTCCAAGTCCATCTTGGAGTGGTTCATGT 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ACTGCCATGTATCTGCATATGAAAAATCTTTTCCTATTAAACCTGTTCCAAGTCCATCTTGGAGTGGTTCATGT 1258
Query 493 CGTCGAAGTCTCTTGAGCCCCAAGAAAACTCAGAGGCGACATGTTAGTACAGCAGAAGAGACAGTTCAAGAAGA 566
|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CGTCGAAGTCTTTTGAGCCCCAAGAAAACTCAGAGGCGACATGTTAGTACAGCAGAAGAGACAGTTCAAGAAGA 1332
Query 567 AGAAAGAGAGGTTTACAGACAGCTGCTACAGATGGTCACAGGGAAACAGTTTACTATAGCCAAACCCACCACAC 640
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGAAAGAGAGATTTACAGACAGCTGCTACAGATGGTCACAGGGAAACAGTTTACTATAGCCAAACCCACCACAC 1406
Query 641 ATTTTCCTTTACACCTGTCTCGATGTCTTAGTTCCAGTAAAAATACTTTGAAAGACTCACTGTTTAAAAATGGA 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ATTTTCCTTTACACCTGTCTCGATGTCTTAGTTCCAGTAAAAATACTTTGAAAGACTCACTGTTTAAAAATGGA 1480
Query 715 AACTCTTGTGCATCTCAGATCATTGGCTCTGATACTTCATCATCTGGATCTGCCAGCATTTTAACTAACCAGGA 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AACTCTTGTGCATCTCAGATCATTGGCTCTGATACTTCATCATCTGGATCTGCCAGCATTTTAACTAACCAGGA 1554
Query 789 ACAGCTGTCCCACAGTGTATATTCCCTATCTTCTTATACCCCAGATGTTGCATTTGGATCCAAAGATTCTGGTA 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ACAGCTGTCCCACAGTGTATATTCCCTATCTTCTTATACCCCAGATGTTGCATTTGGATCCAAAGATTCTGGTA 1628
Query 863 CTCTTCATCATCCCCATCATCACCACTCTGTTCCACATCAGCCAGATAACTTAGCAGCTTCAAATACACAATCT 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CTCTTCATCATCCCCATCATCACCACTCTGTTCCACATCAGCCAGATAACTTAGCAGCTTCAAATACACAATCT 1702
Query 937 GAAGGATCAGACTCTGTGATTTTACTGAAAGTGAAAGATTCCCAGACTCCAACTCCCAGTTCTACTTTCTTCCA 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GAAGGATCAGACTCTGTGATTTTACTGAAAGTGAAAGATTCCCAGACTCCAACTCCCAGTTCTACTTTCTTCCA 1776
Query 1011 GGCAGAGCTGTGGATCAAAGAATTAACTAGTGTTTATGGTTCTCGAGCACGAGAAAGATTGCGCCAGATTGAAG 1084
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 1777 GGCAGAGCTGTGGATCAAAGAATTAACTAGTGTTTATGATTCTCGAGCACGAGAAAGATTGCGCCAGATTGAAG 1850
Query 1085 AACAGAAGGCATTGGCCTTACAGCTTCAAAACCAGAGATTGCAGGAGCGGGAACATTCAGTACATGATTCAGTA 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AACAGAAGGCATTGGCCTTACAGCTTCAAAACCAGAGATTGCAGGAGCGGGAACATTCAGTACATGATTCAGTA 1924
Query 1159 GAACTACATCTTCGTGTACCTCTTGAAAAGGAGATTCCTGTTACTGTTGTCCAAGAAACACAAAAAAAAGGTCA 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GAACTACATCTTCGTGTACCTCTTGAAAAGGAGATTCCTGTTACTGTTGTCCAAGAAACACAAAAAAAAGGTCA 1998
Query 1233 TAAATTAACTGATAGTGAAGATGAATTTCCTGAAATTACAGAGGAAATGGAGAAAGAAATAAAGAATGTATTTC 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TAAATTAACTGATAGTGAAGATGAATTTCCTGAAATTACAGAGGAAATGGAGAAAGAAATAAAGAATGTATTTC 2072
Query 1307 GTAATGGGAATCAGGATGAAGTTCTCAGTGAAGCATTTCGCCTGACCATTACACGCAAAGATATTCAAACTCTA 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GTAATGGGAATCAGGATGAAGTTCTCAGTGAAGCATTTCGCCTGACCATTACACGCAAAGATATTCAAACTCTA 2146
Query 1381 AACCATCTGAATTGGCTCAATGATGAGATCATCAATTTCTACATGAATATGCTGATGGAGCGAAGTAAAGAGAA 1454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 AACCATCTGAATTGGCTCAATGATGAGATCATCAATTTCTACATGAATATGCTGATGGAGCGAAGTAAAGAGAA 2220
Query 1455 GGGCTTGCCAAGTGTGCATGCATTTAATACCTTTTTCTTCACTAAATTAAAAACGGCTGGTTATCAGGCAGTGA 1528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GGGCTTGCCAAGTGTGCATGCATTTAATACCTTTTTCTTCACTAAATTAAAAACGGCTGGTTATCAGGCAGTGA 2294
Query 1529 AACGTTGGACAAAGAAAGTAGATGTATTTTCTGTTGACATTCTTTTGGTGCCCATTCACCTGGGAGTACACTGG 1602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 AACGTTGGACAAAGAAAGTAGATGTATTTTCTGTTGACATTCTTTTGGTGCCCATTCACCTGGGAGTACACTGG 2368
Query 1603 TGTCTAGCTGTTGTGGACTTTAGAAAGAAGAATATTACCTATTACGACTCCATGGGTGGGATAAACAATGAAGC 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TGTCTAGCTGTTGTGGACTTTAGAAAGAAGAATATTACCTATTACGACTCCATGGGTGGGATAAACAATGAAGC 2442
Query 1677 CTGCAGAATACTCTTGCAATACCTAAAGCAAGAAAGCATTGACAAGAAAAGGAAAGAGTTTGACACCAATGGCT 1750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CTGCAGAATACTCTTGCAATACCTAAAGCAAGAAAGCATTGACAAGAAAAGGAAAGAGTTTGACACCAATGGCT 2516
Query 1751 GGCAGCTTTTCAGCAAGAAAAGCCAGGAGATTCCTCAGCAGATGAATGGAAGTGACTGTGGGATGTTTGCCTGC 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GGCAGCTTTTCAGCAAGAAAAGCCAGGAGATTCCTCAGCAGATGAATGGAAGTGACTGTGGGATGTTTGCCTGC 2590
Query 1825 AAATATGCTGACTGTATTACCAAAGACAGACCAATCAACTTCACACAGCAACACATGCCATACTTCCGGAAGCG 1898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 AAATATGCTGACTGTATTACCAAAGACAGACCAATCAACTTCACACAGCAACACATGCCATACTTCCGGAAGCG 2664
Query 1899 GATGGTCTGGGAGATCCTCCACCGAAAACTCTTG---------------------------------------- 1932
||||||||||||||||||||||||||||||||||
Sbjct 2665 GATGGTCTGGGAGATCCTCCACCGAAAACTCTTGTGAAGACTGTCTCACTTAGCAGACCTTGACCATGTGGGGG 2738
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2739 ACCAGCTCTTTGTTGTCTACAGCCAGAGACCTTGGAAACAGCTGCTCCCAGCCCTCTGCTGTTGTAACACCCTT 2812
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2813 GATCCTGGACCAGGCCCTGGCGAGATGCATTCACAAGCACATCTGCCTTTCCTTTTGTATCTCAGATACTATTT 2886
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2887 TTGCAAAGAAACTTTGGTGCTGTGAAAGGGGTGAGGGACATCCCTAAGCTGAAGAGAGAGACTGCTTTTCACTT 2960
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2961 CTTCAGTTCTGCCATCTTGTTTTCAAAGGGCTCCAGCCTCACTCAGTCCCTAATTATGGGACTGAGAAAAGCTT 3034
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3035 GGAAAGAATCTTGGTTTCATATAAATTCTTGTTGTTAGGCCTTACTAAGAAGTAGGAAAGGGCATGGGCAAAAG 3108
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3109 GTAGGGATAAAAACCACCAGCATATACATGGACATACACACACACCCACACACACAAACACACACACACACACA 3182
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3183 ATTTTCACGATGTATGGTCAGGAATGTGACTGTAAACTGGACTTTGGGGCCCAGGCATAAGTCCCTTCCTCCAG 3256
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3257 GACCTTTCCTATTTATATGTCCCTATACAAAATCCATCTGCTTTTATACGTAGCTGTTTTATCATCTGTAGCTT 3330
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3331 CATCCTATCCGGAGGCACAGCACATGAGCCCTGGACAGGTCCCAAAGTTCCAAGCAGTCCTTTCCGTGAAAGCA 3404
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3405 GGGGTTTGCATGTGCTACCAACACATGATACGGGGAAGACCCACCCAGGGAGCGGTTTCAGTGGCGCAACAAAG 3478
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3479 CACCACTTTTACTGTTGCCTACTTCTGACCAAGAAGAAAAAGGACCTTAGTATTTAGCATAAAATTCCAGCGCT 3552
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3553 GGATGAATGCAGATCTAGTTTGGTCTGTGGCTAGTTTAAATATGTTTCTAACCACAGAGAATTTCATATATATA 3626
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3627 TACATATATATATACACATACATATATATATATATATATGTATGTATAAAATTTCACAGGGATATGCTTTTTTT 3700
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3701 TTTAAAGACTGAATGTGTTCACCATTTAGCCTGTAGATTTATTTCCATTTTCCAAATTCCAGCACACAGAGATC 3774
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3775 CCAGCCCCTATGAGTAGGGTGTTTGTGGACTACCTAATGGAATATTTTTGAGGCCTGGATGAACTTTGCCATAT 3848
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3849 GGGTAGAGGTTACAGAGGGAGGTGATATTTTCAGCTAAAAAAAAAAACGGGTGGAGTTTGGACTGATCAACTTG 3922
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3923 AGATTTAAAAACTGCTATTCCTTTTGTTCTTTCTAGCATCTCTCCCCACCCTCTGAGAGCTCCTCAGGCTTAGA 3996
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3997 TAGTGAAGTGATCAAATGCCAGTGTCATTTTGTACTTAAGTTCCAAAGTAGGAACATTTTATACTTTTTTCTGT 4070
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4071 ATTGTAATAGGTAGTTTTGTATGAAATCTTTTCTCCTCTCCCGTTGTACCGCATTCTTTCCAGCATTGTGCTTT 4144
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4145 TTCCCTGGGCTTATTTGAAAATTTTACTGTTTTATACAAGCTCGTTTAGTACATTTTTCTATGTTTTACCACAA 4218
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4219 GTTACAATTTGAAAAGAAAACTATTTTTTTTAAATATTCCATTGTTAACTGAATGTTACTGTTTCCACTCCAGC 4292
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4293 AACTACATGTCCTCCCTTCAACTGCCTGCCTTTTGGGGAAAGACCACCTTTTGTGTGTTTGTTTTTTCTCTCTC 4366
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4367 TTTCTTTCCCTTTCTCTTTCTATCTCTCTTTATTTTTCTTTCTTTTTCTTTGTTTTTGAGTTTTCTATAGGAAA 4440
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4441 TAAATAGCTTTCTATATATGAGTTGCTGGGGACCTTCACATTCTCTTTTAGAAAGCTGTGGCATGCAGTCTCAT 4514
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4515 TGCAGGACTCCTGGAATATTGTCTGGTTCTTGGTATTTACTGTATGTAAGCAACAACTTGAAAGGTGGCAATAT 4588
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4589 GGTGTCGATTTGGACTATGAATCAAAAGACCTTTTTCAGGTTCTTTCACTATTGTCTGGGGGACTCAGAACAAG 4662
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4663 ATTGTTCTCTGTATTTATTGTTTGTCCATTTAGGTAACATCTGTCTTACCTTCCTCACAGACTTTGTACAGACC 4736
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4737 AAAGCAACAAATATTTATTGCCATGTATAGCAGAAAATGAAACATGCAACAAAAGCACTTTGAAAAATATATAA 4810
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4811 GGAATTGTTGAGCCTGTCTGAATTTGGGCCCCCTTTCTGACTAATGCAGTTTTGCACAAGGTAGAAGTTAGTGA 4884
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4885 CCCTGAGACCATCTTACCACCCTGGACCTGGTCCAAATACAGACTTACACAGTGGACCATTCTTTCCTGAGCTA 4958
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4959 GCCAACAAGAGCAGGAGTAGTATCTGGAAACTTTCCCCTTTGTTTAGGGGTAGGCTTTGATGACCAGGAAAAAA 5032
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 5033 AAAAAGGTATTTCTGCATTTTATGGCCCAAAGGCATGTTATTAATATCTTATGTAATTTACTTTAAACTAAATA 5106
Query 1933 ---------------------------- 1932
Sbjct 5107 AGACTTTTTTCTCCTGTGTAAAAAAAAA 5134
