Nucleotide Global Alignment
Description
- Query:
- TRCN0000479266
- Subject:
- NR_051992.2
- Aligned Length:
- 5002
- Identities:
- 1929
- Gaps:
- 3070
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTGTCCGGTGGCCGCGCTGTGGCCGCCGGTGGCCGTTAGGCTACCTGAGGCCGTTCCTTCTGGTCTCTCTCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGGGCCGCGGAGAGACCGTCTCCCTGCCGTTACAGCAGGCCCCATCCCAGCGCCCAGCCGTACTTGGGGAAAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCGGTTGCGATTCCGGGGCTTTCCCGCCAGAGCTGGGTCTTCTCTGGGGAGAGCTGTTTTCACCGGGAAGCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCTTTCTGTGGTACCGGCTTCATCTCCCGCCTTCCTTGAGACCCGAGTGATATTTCTTGACTACTTCTGCGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCACGTAAACATTTCTCCAACTCTCCTACTCTGTGGTATCTCCCTGAGATGTGATATCGCTAGTGCCACCATCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAAGAAACGTCTGGACCCTCCTGCTCAGGTTATGAAAATCCCCTTAACTGCCACAATTTGCTTACCTGGCTCA 444
Query 1 ------------------------------------------------------ATG-------------GATG 7
||| ||||
Sbjct 445 TCGCCTCCTGGACTTTGTATCTTTGCTAAAGTCAGTGATGTGAAAAGACTTGAAATGGACTGTCTCCCCAGATG 518
Query 8 ATATTGCTGATAGGATGAGGATGGATGCTGGAGAAGTGACTTTAGTGAACCACAACTCCGTATTCAAAACCCAC 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATATTGCTGATAGGATGAGGATGGATGCTGGAGAAGTGACTTTAGTGAACCACAACTCCGTATTCAAAACCCAC 592
Query 82 CTCCTGCCACAAACAGGTTTTCCAGAGGACCAGCTTTCGCTTTCTGACCAGCAGATTTTATCTTCCAGGCAAGG 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTCCTGCCACAAACAGGTTTTCCAGAGGACCAGCTTTCGCTTTCTGACCAGCAGATTTTATCTTCCAGGCAAGG 666
Query 156 ACATTTGGACCGATCTTTTACATGTTCCACAAGAAGTGCAGCTTATAATCCAAGCTATTAC------------- 216
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACATTTGGACCGATCTTTTACATGTTCCACAAGAAGTGCAGCTTATAATCCAAGCTATTACTCAGGCCCAGGCC 740
Query 217 -------------------------------------------------------------------------- 216
Sbjct 741 TGGGAGTGCTTGCAAGATATAGTTGGGGTAAAATGTTGACTTTTGGTGGACACCACGGAGTCACATTGATGCAG 814
Query 217 --------------------------------------------TCAGATAATCCTTCCTCAGACAGTTTTCTT 246
||||||||||||||||||||||||||||||
Sbjct 815 ATAAGGCACATGGCTGTGGCAGGATTCAGCTCCTTCATCAATTTTCAGATAATCCTTCCTCAGACAGTTTTCTT 888
Query 247 GGCTCAGGCGATTTAAGAACCTTTGGCCAGAGTGCAAATGGCCAATGGAGAAATTCTACCCCATCGTCAAGCTC 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGCTCAGGCGATTTAAGAACCTTTGGCCAGAGTGCAAATGGCCAATGGAGAAATTCTACCCCATCGTCAAGCTC 962
Query 321 ATCTTTACAAAAATCAAGAAACAGCCGAAGTCTTTACCTCGAAACCCGAAAGACCTCAAGTGGATTATCAAACA 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ATCTTTACAAAAATCAAGAAACAGCCGAAGTCTTTACCTCGAAACCCGAAAGACCTCAAGTGGATTATCAAACA 1036
Query 395 GTTTTGCGGGAAAGTCAAACCATCACTGCCATGTATCTGCATATGAAAAATCTTTTCCTATTAAACCTGTTCCA 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GTTTTGCGGGAAAGTCAAACCATCACTGCCATGTATCTGCATATGAAAAATCTTTTCCTATTAAACCTGTTCCA 1110
Query 469 AGTCCATCTTGGAGTGGTTCATGTCGTCGAAGTCTCTTGAGCCCCAAGAAAACTCAGAGGCGACATGTTAGTAC 542
|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGTCCATCTTGGAGTGGTTCATGTCGTCGAAGTCTTTTGAGCCCCAAGAAAACTCAGAGGCGACATGTTAGTAC 1184
Query 543 AGCAGAAGAGACAGTTCAAGAAGAAGAAAGAGAGGTTTACAGACAGCTGCTACAGATGGTCACAGGGAAACAGT 616
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGCAGAAGAGACAGTTCAAGAAGAAGAAAGAGAGATTTACAGACAGCTGCTACAGATGGTCACAGGGAAACAGT 1258
Query 617 TTACTATAGCCAAACCCACCACACATTTTCCTTTACACCTGTCTCGATGTCTTAGTTCCAGTAAAAATACTTTG 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TTACTATAGCCAAACCCACCACACATTTTCCTTTACACCTGTCTCGATGTCTTAGTTCCAGTAAAAATACTTTG 1332
Query 691 AAAGACTCACTGTTTAAAAATGGAAACTCTTGTGCATCTCAGATCATTGGCTCTGATACTTCATCATCTGGATC 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AAAGACTCACTGTTTAAAAATGGAAACTCTTGTGCATCTCAGATCATTGGCTCTGATACTTCATCATCTGGATC 1406
Query 765 TGCCAGCATTTTAACTAACCAGGAACAGCTGTCCCACAGTGTATATTCCCTATCTTCTTATACCCCAGATGTTG 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGCCAGCATTTTAACTAACCAGGAACAGCTGTCCCACAGTGTATATTCCCTATCTTCTTATACCCCAGATGTTG 1480
Query 839 CATTTGGATCCAAAGATTCTGGTACTCTTCATCATCCCCATCATCACCACTCTGTTCCACATCAGCCAGATAAC 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CATTTGGATCCAAAGATTCTGGTACTCTTCATCATCCCCATCATCACCACTCTGTTCCACATCAGCCAGATAAC 1554
Query 913 TTAGCAGCTTCAAATACACAATCTGAAGGATCAGACTCTGTGATTTTACTGAAAGTGAAAGATTCCCAGACTCC 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TTAGCAGCTTCAAATACACAATCTGAAGGATCAGACTCTGTGATTTTACTGAAAGTGAAAGATTCCCAGACTCC 1628
Query 987 AACTCCCAGTTCTACTTTCTTCCAGGCAGAGCTGTGGATCAAAGAATTAACTAGTGTTTATGGTTCTCGAGCAC 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1629 AACTCCCAGTTCTACTTTCTTCCAGGCAGAGCTGTGGATCAAAGAATTAACTAGTGTTTATGATTCTCGAGCAC 1702
Query 1061 GAGAAAGATTGCGCCAGATTGAAGAACAGAAGGCATTGGCCTTACAGCTTCAAAACCAGAGATTGCAGGAGCGG 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GAGAAAGATTGCGCCAGATTGAAGAACAGAAGGCATTGGCCTTACAGCTTCAAAACCAGAGATTGCAGGAGCGG 1776
Query 1135 GAACATTCAGTACATGATTCAGTAGAACTACATCTTCGTGTACCTCTTGAAAAGGAGATTCCTGTTACTGTTGT 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GAACATTCAGTACATGATTCAGTAGAACTACATCTTCGTGTACCTCTTGAAAAGGAGATTCCTGTTACTGTTGT 1850
Query 1209 CCAAGAAACACAAAAAAAAGGTCATAAATTAACTGATAGTGAAGATGAATTTCCTGAAATTACAGAGGAAATGG 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CCAAGAAACACAAAAAAAAGGTCATAAATTAACTGATAGTGAAGATGAATTTCCTGAAATTACAGAGGAAATGG 1924
Query 1283 AGAAAGAAATAAAGAATGTATTTCGTAATGGGAATCAGGATGAAGTTCTCAGTGAAGCATTTCGCCTGACCATT 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AGAAAGAAATAAAGAATGTATTTCGTAATGGGAATCAGGATGAAGTTCTCAGTGAAGCATTTCGCCTGACCATT 1998
Query 1357 ACACGCAAAGATATTCAAACTCTAAACCATCTGAATTGGCTCAATGATGAGATCATCAATTTCTACATGAATAT 1430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 ACACGCAAAGATATTCAAACTCTAAACCATCTGAATTGGCTCAATGATGAGATCATCAATTTCTACATGAATAT 2072
Query 1431 GCTGATGGAGCGAAGTAAAGAGAAGGGCTTGCCAAGTGTGCATGCATTTAATACCTTTTTCTTCACTAAATTAA 1504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GCTGATGGAGCGAAGTAAAGAGAAGGGCTTGCCAAGTGTGCATGCATTTAATACCTTTTTCTTCACTAAATTAA 2146
Query 1505 AAACGGCTGGTTATCAGGCAGTGAAACGTTGGACAAAGAAAGTAGATGTATTTTCTGTTGACATTCTTTTGGTG 1578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 AAACGGCTGGTTATCAGGCAGTGAAACGTTGGACAAAGAAAGTAGATGTATTTTCTGTTGACATTCTTTTGGTG 2220
Query 1579 CCCATTCACCTGGGAGTACACTGGTGTCTAGCTGTTGTGGACTTTAGAAAGAAGAATATTACCTATTACGACTC 1652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CCCATTCACCTGGGAGTACACTGGTGTCTAGCTGTTGTGGACTTTAGAAAGAAGAATATTACCTATTACGACTC 2294
Query 1653 CATGGGTGGGATAAACAATGAAGCCTGCAGAATACTCTTGCAATACCTAAAGCAAGAAAGCATTGACAAGAAAA 1726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CATGGGTGGGATAAACAATGAAGCCTGCAGAATACTCTTGCAATACCTAAAGCAAGAAAGCATTGACAAGAAAA 2368
Query 1727 GGAAAGAGTTTGACACCAATGGCTGGCAGCTTTTCAGCAAGAAAAGCCAGGAGATTCCTCAGCAGATGAATGGA 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GGAAAGAGTTTGACACCAATGGCTGGCAGCTTTTCAGCAAGAAAAGCCAGGAGATTCCTCAGCAGATGAATGGA 2442
Query 1801 AGTGACTGTGGGATGTTTGCCTGCAAATATGCTGACTGTATTACCAAAGACAGACCAATCAACTTCACACAGCA 1874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 AGTGACTGTGGGATGTTTGCCTGCAAATATGCTGACTGTATTACCAAAGACAGACCAATCAACTTCACACAGCA 2516
Query 1875 ACACATGCCATACTTCCGGAAGCGGATGGTCTGGGAGATCCTCCACCGAAAACTCTTG---------------- 1932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 ACACATGCCATACTTCCGGAAGCGGATGGTCTGGGAGATCCTCCACCGAAAACTCTTGTGAAGACTGTCTCACT 2590
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2591 TAGCAGACCTTGACCATGTGGGGGACCAGCTCTTTGTTGTCTACAGCCAGAGACCTTGGAAACAGCTGCTCCCA 2664
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2665 GCCCTCTGCTGTTGTAACACCCTTGATCCTGGACCAGGCCCTGGCGAGATGCATTCACAAGCACATCTGCCTTT 2738
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2739 CCTTTTGTATCTCAGATACTATTTTTGCAAAGAAACTTTGGTGCTGTGAAAGGGGTGAGGGACATCCCTAAGCT 2812
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2813 GAAGAGAGAGACTGCTTTTCACTTCTTCAGTTCTGCCATCTTGTTTTCAAAGGGCTCCAGCCTCACTCAGTCCC 2886
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2887 TAATTATGGGACTGAGAAAAGCTTGGAAAGAATCTTGGTTTCATATAAATTCTTGTTGTTAGGCCTTACTAAGA 2960
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 2961 AGTAGGAAAGGGCATGGGCAAAAGGTAGGGATAAAAACCACCAGCATATACATGGACATACACACACACCCACA 3034
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3035 CACACAAACACACACACACACACAATTTTCACGATGTATGGTCAGGAATGTGACTGTAAACTGGACTTTGGGGC 3108
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3109 CCAGGCATAAGTCCCTTCCTCCAGGACCTTTCCTATTTATATGTCCCTATACAAAATCCATCTGCTTTTATACG 3182
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3183 TAGCTGTTTTATCATCTGTAGCTTCATCCTATCCGGAGGCACAGCACATGAGCCCTGGACAGGTCCCAAAGTTC 3256
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3257 CAAGCAGTCCTTTCCGTGAAAGCAGGGGTTTGCATGTGCTACCAACACATGATACGGGGAAGACCCACCCAGGG 3330
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3331 AGCGGTTTCAGTGGCGCAACAAAGCACCACTTTTACTGTTGCCTACTTCTGACCAAGAAGAAAAAGGACCTTAG 3404
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3405 TATTTAGCATAAAATTCCAGCGCTGGATGAATGCAGATCTAGTTTGGTCTGTGGCTAGTTTAAATATGTTTCTA 3478
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3479 ACCACAGAGAATTTCATATATATATACATATATATATACACATACATATATATATATATATATGTATGTATAAA 3552
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3553 ATTTCACAGGGATATGCTTTTTTTTTTAAAGACTGAATGTGTTCACCATTTAGCCTGTAGATTTATTTCCATTT 3626
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3627 TCCAAATTCCAGCACACAGAGATCCCAGCCCCTATGAGTAGGGTGTTTGTGGACTACCTAATGGAATATTTTTG 3700
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3701 AGGCCTGGATGAACTTTGCCATATGGGTAGAGGTTACAGAGGGAGGTGATATTTTCAGCTAAAAAAAAAAACGG 3774
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3775 GTGGAGTTTGGACTGATCAACTTGAGATTTAAAAACTGCTATTCCTTTTGTTCTTTCTAGCATCTCTCCCCACC 3848
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3849 CTCTGAGAGCTCCTCAGGCTTAGATAGTGAAGTGATCAAATGCCAGTGTCATTTTGTACTTAAGTTCCAAAGTA 3922
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3923 GGAACATTTTATACTTTTTTCTGTATTGTAATAGGTAGTTTTGTATGAAATCTTTTCTCCTCTCCCGTTGTACC 3996
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 3997 GCATTCTTTCCAGCATTGTGCTTTTTCCCTGGGCTTATTTGAAAATTTTACTGTTTTATACAAGCTCGTTTAGT 4070
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4071 ACATTTTTCTATGTTTTACCACAAGTTACAATTTGAAAAGAAAACTATTTTTTTTAAATATTCCATTGTTAACT 4144
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4145 GAATGTTACTGTTTCCACTCCAGCAACTACATGTCCTCCCTTCAACTGCCTGCCTTTTGGGGAAAGACCACCTT 4218
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4219 TTGTGTGTTTGTTTTTTCTCTCTCTTTCTTTCCCTTTCTCTTTCTATCTCTCTTTATTTTTCTTTCTTTTTCTT 4292
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4293 TGTTTTTGAGTTTTCTATAGGAAATAAATAGCTTTCTATATATGAGTTGCTGGGGACCTTCACATTCTCTTTTA 4366
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4367 GAAAGCTGTGGCATGCAGTCTCATTGCAGGACTCCTGGAATATTGTCTGGTTCTTGGTATTTACTGTATGTAAG 4440
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4441 CAACAACTTGAAAGGTGGCAATATGGTGTCGATTTGGACTATGAATCAAAAGACCTTTTTCAGGTTCTTTCACT 4514
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4515 ATTGTCTGGGGGACTCAGAACAAGATTGTTCTCTGTATTTATTGTTTGTCCATTTAGGTAACATCTGTCTTACC 4588
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4589 TTCCTCACAGACTTTGTACAGACCAAAGCAACAAATATTTATTGCCATGTATAGCAGAAAATGAAACATGCAAC 4662
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4663 AAAAGCACTTTGAAAAATATATAAGGAATTGTTGAGCCTGTCTGAATTTGGGCCCCCTTTCTGACTAATGCAGT 4736
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4737 TTTGCACAAGGTAGAAGTTAGTGACCCTGAGACCATCTTACCACCCTGGACCTGGTCCAAATACAGACTTACAC 4810
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4811 AGTGGACCATTCTTTCCTGAGCTAGCCAACAAGAGCAGGAGTAGTATCTGGAAACTTTCCCCTTTGTTTAGGGG 4884
Query 1933 -------------------------------------------------------------------------- 1932
Sbjct 4885 TAGGCTTTGATGACCAGGAAAAAAAAAAAGGTATTTCTGCATTTTATGGCCCAAAGGCATGTTATTAATATCTT 4958
Query 1933 -------------------------------------------- 1932
Sbjct 4959 ATGTAATTTACTTTAAACTAAATAAGACTTTTTTCTCCTGTGTT 5002
