Nucleotide Global Alignment
Description
- Query:
- TRCN0000479266
- Subject:
- XM_006520883.2
- Aligned Length:
- 2013
- Identities:
- 1317
- Gaps:
- 522
Alignment
Query 1 ATGGATGATATTGCTGATAGGATGAGGATGGATGCTGGAGAAGTGACTTTAGTGAACCACAACTCCGTATTCAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AACCCACCTCCTGCCACAAACAGGTTTTCCAGAGGACCAGCTTTCGCTTTCTGACCAGCAGATTTTATCTTCCA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GGCAAGGACATTTGGACCGATCTTTTACATGTTCCACAAGAAGTGCAGCTTATAATCCAAGCTATTACTCAGAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AATCCTTCCTCAGACAGTTTTCTTGGCTCAGGCGATTTAAGAACCTTTGGCCAGAGTGCAAATGGCCAATGGAG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AAATTCTACCCCATCGTCAAGCTCATCTTTACAAAAATCAAGAAACAGCCGAAGTCTTTACCTCGAAACCCGAA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGACCTCAAGTGGATTATCAAACAGTTTTGCGGGAAAGTCAAACCATCACTGCCATGTATCTGCATATGAAAAA 444
||| |||||.||||||||.
Sbjct 1 ------------------------------------------------------ATG--TCTGCGTATGAAAAG 18
Query 445 TCTTTTCCTATTAAACCTGTTCCAAGTCCATCTTGGAGTGGTTCATGTCGTCGAAGTCTCTTGAGCCCCAAGAA 518
||.|||||.|||||.||||..|||||||||||.||||||||.|||||||||||.|||||.||.|||||.|||||
Sbjct 19 TCATTTCCCATTAAGCCTGCCCCAAGTCCATCCTGGAGTGGGTCATGTCGTCGGAGTCTTTTAAGCCCTAAGAA 92
Query 519 AACTCAGAGGCGACATGTTAGTACAGCAGAAGAGACAGTTCAAGAAGAAGA-AAGAGAGGTTTACAGACAGCTG 591
||||||||||||||||.|.||.||||||||||||||||||||||||||||| ||| |||.|.||||||||||||
Sbjct 93 AACTCAGAGGCGACATTTCAGCACAGCAGAAGAGACAGTTCAAGAAGAAGAGAAG-GAGATCTACAGACAGCTG 165
Query 592 CTACAGATGGTCACAGGGAAACAGTTTACTATAGCCAAACCCACCACACATTTTCCTTTACACCTGTCTCGATG 665
||.|||||||||||||||||.|||||...|.||||.||||||||||||||||||||.||||.|||||||||.||
Sbjct 166 CTGCAGATGGTCACAGGGAAGCAGTTCTGTGTAGCGAAACCCACCACACATTTTCCGTTACGCCTGTCTCGGTG 239
Query 666 TCTTAGTTCCAGTAAAAATACTTTGAAAGACTCACTGTTTAAAAATGGAAACTCTTGTGCATCTCAGATCATTG 739
|||||||||||.|||.||..|||||||||||||.|||||.|.|||.||||||||||||||||||||..||||||
Sbjct 240 TCTTAGTTCCAATAAGAACTCTTTGAAAGACTCGCTGTTGAGAAACGGAAACTCTTGTGCATCTCATGTCATTG 313
Query 740 GCTCTGATACTTCATCATCTGGATCTGCCAGCATTTTAACTAACCAGGAACAGCTGTCCCACAGTGTATATTCC 813
|.||||||||.|||||.||||||||||||||||||||||||...|||||.|||.||||||||||||.|.|||||
Sbjct 314 GTTCTGATACGTCATCCTCTGGATCTGCCAGCATTTTAACTGCACAGGAGCAGTTGTCCCACAGTGCACATTCC 387
Query 814 CTATCTTCTTATACCCCAGATGTTGCATTTGGATCCAAAGATTCTGGTACTCTTCATCATCCCCATCATCACCA 887
||.||.|||..|||||||||||||||.||||||||||||||.|||| ||||.||.|||||||.
Sbjct 388 CTGTCATCTGGTACCCCAGATGTTGCCTTTGGATCCAAAGACTCTG------------ATCCTCACCATCACCT 449
Query 888 CTCTGTTCCACATCAGCCAGATAACTTAGCAGCTTCAAATACACAATCTGAAGGATCAGACTCTGTGATTTTAC 961
|.|||..||.|||||||||.|||.||||.||||.|||||||||||.||.|||||.|||||||||||||||||||
Sbjct 450 CGCTGCACCTCATCAGCCAAATAGCTTACCAGCATCAAATACACAGTCCGAAGGGTCAGACTCTGTGATTTTAC 523
Query 962 TGAAAGTGAAAGATTCCCAGACTCCAACTCCCAGTT-------------------------------------- 997
|.|||||||||||.||.|||||||||.||.||||.|
Sbjct 524 TTAAAGTGAAAGAATCTCAGACTCCAGCTTCCAGATACCTCAGTCCATTGAAGAGACGTTCTTGCCCCTACATT 597
Query 998 ----------------------------------------CTACTTTCTTCCAGGCAGAGCTGTGGATCAAAGA 1031
||||.|||||||||||||||||.|||||||||||
Sbjct 598 ATTCCTTATTCAGCAGTCATGGATCTGCTCTCTAGCAGCCCTACGTTCTTCCAGGCAGAGCTATGGATCAAAGA 671
Query 1032 ATTAACTAGTGTTTATGGTTCTCGAGCACGAGAAAGATTGCGCCAGATTGAAGAACAGAAGGCATTGGCCTTAC 1105
|||||||||.|||||||..||||||||.||.|||||||||||||.|||||||||.|||||.||||||||..|||
Sbjct 672 ATTAACTAGCGTTTATGACTCTCGAGCTCGGGAAAGATTGCGCCGGATTGAAGAGCAGAAAGCATTGGCACTAC 745
Query 1106 AGCTTCAAAACCAGAGATTGCAGGAGCGGGAACATTCAGTACATGATTCAGTAGAACTACATCTTCGTGTACCT 1179
||||||||||||||.||.|||||||||.|||||||.||||||.|||.||.|||||.||.||.||||||||.|||
Sbjct 746 AGCTTCAAAACCAGCGACTGCAGGAGCAGGAACATGCAGTACTTGACTCCGTAGAGCTTCACCTTCGTGTGCCT 819
Query 1180 CTTGAAAAGGAGATTCCTGTTACTGTTGTCCAAGAAACACA--AAAAAAAGGTCATAAATTAACTGATAGTGAA 1251
||||||||||||||||||||.||.|.||.||||||||| || ||||||| |.||..|..|.|||||.||||||
Sbjct 820 CTTGAAAAGGAGATTCCTGTCACAGCTGCCCAAGAAAC-CAGGAAAAAAA-GCCACCAGCTGACTGACAGTGAA 891
Query 1252 GATGAATTTCCTGAAATTACAGAGGAAATGGAGAAAGAAATAAAGAATGTATTTCGTAATGGGAATCAGGATGA 1325
||.|||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||.||.||||||||
Sbjct 892 GACGAATTTCCTGAAATTACAGAGGAAATGGAAAAAGAAATAAAGAATGTATTTCGTAACGGTAACCAGGATGA 965
Query 1326 AGTTCTCAGTGAAGCATTTCGCCTGACCATTACACGCAAAGATATTCAAACTCTAAACCATCTGAATTGGCTCA 1399
|||.||||||||.|||||.|||.|||||||||||||||||||.|||||.||||||||||||||.||.|||||||
Sbjct 966 AGTCCTCAGTGAGGCATTCCGCTTGACCATTACACGCAAAGACATTCAGACTCTAAACCATCTAAACTGGCTCA 1039
Query 1400 ATGATGAGATCATCAATTTCTACATGAATATGCTGATGGAGCGAAGTAAAGAGAAGGGCTTGCCAAGTGTGCAT 1473
||||||||||||||||||||||||||||.|||||.|||||.||.||||||||||||||.||.||||||||.|||
Sbjct 1040 ATGATGAGATCATCAATTTCTACATGAACATGCTAATGGAACGCAGTAAAGAGAAGGGGTTTCCAAGTGTACAT 1113
Query 1474 GCATTTAATACCTTTTTCTTCACTAAATTAAAAACGGCTGGTTATCAGGCAGTGAAACGTTGGACAAAGAAAGT 1547
||.|||||||||||.|||||||||||..|||||||.|||||||||||||||||||||||.|||||||||||.||
Sbjct 1114 GCGTTTAATACCTTCTTCTTCACTAAGCTAAAAACAGCTGGTTATCAGGCAGTGAAACGCTGGACAAAGAAGGT 1187
Query 1548 AGATGTATTTTCTGTTGACATTCTTTTGGTGCCCATTCACCTGGGAGTACACTGGTGTCTAGCTGTTGTGGACT 1621
.||||||||.||.|||||.||||||.||||||||||||||.||||.||.||||||||||||||||||||.||||
Sbjct 1188 GGATGTATTCTCCGTTGATATTCTTCTGGTGCCCATTCACTTGGGTGTGCACTGGTGTCTAGCTGTTGTAGACT 1261
Query 1622 TTAGAAAGAAGAATATTACCTATTACGACTCCATGGGTGGGATAAACAATGAAGCCTGCAGAATACTCTTGCAA 1695
||||||.|||||.|||.|||||.||.||.||.||||||||.||||||||.||.||||||||.||.|||||||||
Sbjct 1262 TTAGAAGGAAGAGTATCACCTACTATGATTCTATGGGTGGAATAAACAACGAGGCCTGCAGGATCCTCTTGCAA 1335
Query 1696 TACCTAAAGCAAGAAAGCATTGACAAGAAAAGGAAAGAGTTTGACACCAATGGCTGGCAGCTTTTCAGCAAGAA 1769
||||||||.||||||||..|||||||||||||||||||||||||||||||.|||||||||||.|||||||||||
Sbjct 1336 TACCTAAAACAAGAAAGTGTTGACAAGAAAAGGAAAGAGTTTGACACCAACGGCTGGCAGCTCTTCAGCAAGAA 1409
Query 1770 AAGCCAGGAGATTCCTCAGCAGATGAATGGAAGTGACTGTGGGATGTTTGCCTGCAAATATGCTGACTGTATTA 1843
.||||||||.||.||.||||||||||||||.|||||||||||.||||||||.|||||||||||||||||.||||
Sbjct 1410 GAGCCAGGAAATCCCACAGCAGATGAATGGGAGTGACTGTGGAATGTTTGCTTGCAAATATGCTGACTGCATTA 1483
Query 1844 CCAAAGACAGACCAATCAACTTCACACAGCAACACATGCCATACTTCCGGAAGCGGATGGTCTGGGAGATCCTC 1917
|||||||||||||||||||||||||||||||||||||||||||.|||||.|||||.||||||||||||||||||
Sbjct 1484 CCAAAGACAGACCAATCAACTTCACACAGCAACACATGCCATATTTCCGAAAGCGAATGGTCTGGGAGATCCTC 1557
Query 1918 CACCGAAAACTCTTG 1932
|||||.||.||||||
Sbjct 1558 CACCGGAAGCTCTTG 1572
