Nucleotide Global Alignment
Description
- Query:
- TRCN0000479266
- Subject:
- XM_006520884.3
- Aligned Length:
- 1935
- Identities:
- 1316
- Gaps:
- 444
Alignment
Query 1 ATGGATGATATTGCTGATAGGATGAGGATGGATGCTGGAGAAGTGACTTTAGTGAACCACAACTCCGTATTCAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AACCCACCTCCTGCCACAAACAGGTTTTCCAGAGGACCAGCTTTCGCTTTCTGACCAGCAGATTTTATCTTCCA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GGCAAGGACATTTGGACCGATCTTTTACATGTTCCACAAGAAGTGCAGCTTATAATCCAAGCTATTACTCAGAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AATCCTTCCTCAGACAGTTTTCTTGGCTCAGGCGATTTAAGAACCTTTGGCCAGAGTGCAAATGGCCAATGGAG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AAATTCTACCCCATCGTCAAGCTCATCTTTACAAAAATCAAGAAACAGCCGAAGTCTTTACCTCGAAACCCGAA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGACCTCAAGTGGATTATCAAACAGTTTTGCGGGAAAGTCAAACCATCACTGCCATGTATCTGCATATGAAAAA 444
||| |||||.||||||||.
Sbjct 1 ------------------------------------------------------ATG--TCTGCGTATGAAAAG 18
Query 445 TCTTTTCCTATTAAACCTGTTCCAAGTCCATCTTGGAGTGGTTCATGTCGTCGAAGTCTCTTGAGCCCCAAGAA 518
||.|||||.|||||.||||..|||||||||||.||||||||.|||||||||||.|||||.||.|||||.|||||
Sbjct 19 TCATTTCCCATTAAGCCTGCCCCAAGTCCATCCTGGAGTGGGTCATGTCGTCGGAGTCTTTTAAGCCCTAAGAA 92
Query 519 AACTCAGAGGCGACATGTTAGTACAGCAGAAGAGACAGTTCAAGAAGAAGA-AAGAGAGGTTTACAGACAGCTG 591
||||||||||||||||.|.||.||||||||||||||||||||||||||||| ||| |||.|.||||||||||||
Sbjct 93 AACTCAGAGGCGACATTTCAGCACAGCAGAAGAGACAGTTCAAGAAGAAGAGAAG-GAGATCTACAGACAGCTG 165
Query 592 CTACAGATGGTCACAGGGAAACAGTTTACTATAGCCAAACCCACCACACATTTTCCTTTACACCTGTCTCGATG 665
||.|||||||||||||||||.|||||...|.||||.||||||||||||||||||||.||||.|||||||||.||
Sbjct 166 CTGCAGATGGTCACAGGGAAGCAGTTCTGTGTAGCGAAACCCACCACACATTTTCCGTTACGCCTGTCTCGGTG 239
Query 666 TCTTAGTTCCAGTAAAAATACTTTGAAAGACTCACTGTTTAAAAATGGAAACTCTTGTGCATCTCAGATCATTG 739
|||||||||||.|||.||..|||||||||||||.|||||.|.|||.||||||||||||||||||||..||||||
Sbjct 240 TCTTAGTTCCAATAAGAACTCTTTGAAAGACTCGCTGTTGAGAAACGGAAACTCTTGTGCATCTCATGTCATTG 313
Query 740 GCTCTGATACTTCATCATCTGGATCTGCCAGCATTTTAACTAACCAGGAACAGCTGTCCCACAGTGTATATTCC 813
|.||||||||.|||||.||||||||||||||||||||||||...|||||.|||.||||||||||||.|.|||||
Sbjct 314 GTTCTGATACGTCATCCTCTGGATCTGCCAGCATTTTAACTGCACAGGAGCAGTTGTCCCACAGTGCACATTCC 387
Query 814 CTATCTTCTTATACCCCAGATGTTGCATTTGGATCCAAAGATTCTGGTACTCTTCATCATCCCCATCATCACCA 887
||.||.|||..|||||||||||||||.||||||||||||||.|||| ||||.||.|||||||.
Sbjct 388 CTGTCATCTGGTACCCCAGATGTTGCCTTTGGATCCAAAGACTCTG------------ATCCTCACCATCACCT 449
Query 888 CTCTGTTCCACATCAGCCAGATAACTTAGCAGCTTCAAATACACAATCTGAAGGATCAGACTCTGTGATTTTAC 961
|.|||..||.|||||||||.|||.||||.||||.|||||||||||.||.|||||.|||||||||||||||||||
Sbjct 450 CGCTGCACCTCATCAGCCAAATAGCTTACCAGCATCAAATACACAGTCCGAAGGGTCAGACTCTGTGATTTTAC 523
Query 962 TGAAAGTGAAAGATTCCCAGACTCCAACTCCCAGTTCTACTTTCTTCCAGGCAGAGCTGTGGATCAAAGAATTA 1035
|.|||||||||||.||.|||||||||.||.||||..||||.|||||||||||||||||.|||||||||||||||
Sbjct 524 TTAAAGTGAAAGAATCTCAGACTCCAGCTTCCAGCCCTACGTTCTTCCAGGCAGAGCTATGGATCAAAGAATTA 597
Query 1036 ACTAGTGTTTATGGTTCTCGAGCACGAGAAAGATTGCGCCAGATTGAAGAACAGAAGGCATTGGCCTTACAGCT 1109
|||||.|||||||..||||||||.||.|||||||||||||.|||||||||.|||||.||||||||..|||||||
Sbjct 598 ACTAGCGTTTATGACTCTCGAGCTCGGGAAAGATTGCGCCGGATTGAAGAGCAGAAAGCATTGGCACTACAGCT 671
Query 1110 TCAAAACCAGAGATTGCAGGAGCGGGAACATTCAGTACATGATTCAGTAGAACTACATCTTCGTGTACCTCTTG 1183
||||||||||.||.|||||||||.|||||||.||||||.|||.||.|||||.||.||.||||||||.|||||||
Sbjct 672 TCAAAACCAGCGACTGCAGGAGCAGGAACATGCAGTACTTGACTCCGTAGAGCTTCACCTTCGTGTGCCTCTTG 745
Query 1184 AAAAGGAGATTCCTGTTACTGTTGTCCAAGAAACACA--AAAAAAAGGTCATAAATTAACTGATAGTGAAGATG 1255
||||||||||||||||.||.|.||.||||||||| || ||||||| |.||..|..|.|||||.||||||||.|
Sbjct 746 AAAAGGAGATTCCTGTCACAGCTGCCCAAGAAAC-CAGGAAAAAAA-GCCACCAGCTGACTGACAGTGAAGACG 817
Query 1256 AATTTCCTGAAATTACAGAGGAAATGGAGAAAGAAATAAAGAATGTATTTCGTAATGGGAATCAGGATGAAGTT 1329
||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||.||.|||||||||||.
Sbjct 818 AATTTCCTGAAATTACAGAGGAAATGGAAAAAGAAATAAAGAATGTATTTCGTAACGGTAACCAGGATGAAGTC 891
Query 1330 CTCAGTGAAGCATTTCGCCTGACCATTACACGCAAAGATATTCAAACTCTAAACCATCTGAATTGGCTCAATGA 1403
||||||||.|||||.|||.|||||||||||||||||||.|||||.||||||||||||||.||.|||||||||||
Sbjct 892 CTCAGTGAGGCATTCCGCTTGACCATTACACGCAAAGACATTCAGACTCTAAACCATCTAAACTGGCTCAATGA 965
Query 1404 TGAGATCATCAATTTCTACATGAATATGCTGATGGAGCGAAGTAAAGAGAAGGGCTTGCCAAGTGTGCATGCAT 1477
||||||||||||||||||||||||.|||||.|||||.||.||||||||||||||.||.||||||||.|||||.|
Sbjct 966 TGAGATCATCAATTTCTACATGAACATGCTAATGGAACGCAGTAAAGAGAAGGGGTTTCCAAGTGTACATGCGT 1039
Query 1478 TTAATACCTTTTTCTTCACTAAATTAAAAACGGCTGGTTATCAGGCAGTGAAACGTTGGACAAAGAAAGTAGAT 1551
||||||||||.|||||||||||..|||||||.|||||||||||||||||||||||.|||||||||||.||.|||
Sbjct 1040 TTAATACCTTCTTCTTCACTAAGCTAAAAACAGCTGGTTATCAGGCAGTGAAACGCTGGACAAAGAAGGTGGAT 1113
Query 1552 GTATTTTCTGTTGACATTCTTTTGGTGCCCATTCACCTGGGAGTACACTGGTGTCTAGCTGTTGTGGACTTTAG 1625
|||||.||.|||||.||||||.||||||||||||||.||||.||.||||||||||||||||||||.||||||||
Sbjct 1114 GTATTCTCCGTTGATATTCTTCTGGTGCCCATTCACTTGGGTGTGCACTGGTGTCTAGCTGTTGTAGACTTTAG 1187
Query 1626 AAAGAAGAATATTACCTATTACGACTCCATGGGTGGGATAAACAATGAAGCCTGCAGAATACTCTTGCAATACC 1699
||.|||||.|||.|||||.||.||.||.||||||||.||||||||.||.||||||||.||.|||||||||||||
Sbjct 1188 AAGGAAGAGTATCACCTACTATGATTCTATGGGTGGAATAAACAACGAGGCCTGCAGGATCCTCTTGCAATACC 1261
Query 1700 TAAAGCAAGAAAGCATTGACAAGAAAAGGAAAGAGTTTGACACCAATGGCTGGCAGCTTTTCAGCAAGAAAAGC 1773
||||.||||||||..|||||||||||||||||||||||||||||||.|||||||||||.|||||||||||.|||
Sbjct 1262 TAAAACAAGAAAGTGTTGACAAGAAAAGGAAAGAGTTTGACACCAACGGCTGGCAGCTCTTCAGCAAGAAGAGC 1335
Query 1774 CAGGAGATTCCTCAGCAGATGAATGGAAGTGACTGTGGGATGTTTGCCTGCAAATATGCTGACTGTATTACCAA 1847
|||||.||.||.||||||||||||||.|||||||||||.||||||||.|||||||||||||||||.||||||||
Sbjct 1336 CAGGAAATCCCACAGCAGATGAATGGGAGTGACTGTGGAATGTTTGCTTGCAAATATGCTGACTGCATTACCAA 1409
Query 1848 AGACAGACCAATCAACTTCACACAGCAACACATGCCATACTTCCGGAAGCGGATGGTCTGGGAGATCCTCCACC 1921
|||||||||||||||||||||||||||||||||||||||.|||||.|||||.||||||||||||||||||||||
Sbjct 1410 AGACAGACCAATCAACTTCACACAGCAACACATGCCATATTTCCGAAAGCGAATGGTCTGGGAGATCCTCCACC 1483
Query 1922 GAAAACTCTTG 1932
|.||.||||||
Sbjct 1484 GGAAGCTCTTG 1494
