Nucleotide Global Alignment

Description

Query:
TRCN0000479278
Subject:
NR_104380.1
Aligned Length:
2563
Identities:
1614
Gaps:
737

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGCCTCGGTCTTCCTTCCGGGTCGCGCTGGGCCGGGCCCGCCGCCGCGGCAGCAGCACGGGATACTGGGAGCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCTCCTGCTGCCCACGCTGCGGGCTTGCGGCGAAGCTCTGTTCGCCCAGTTCCGGACCCTGCAGGGCTGTCTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCTCAGCATCTGTAGGTGAAAGCAGCATGCATGTTTCAGACACGTGGATGGGCACCAACTCCTGTGCTTCCCGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTGTGTCAGGTGACCTGTCAAGCCAGGACCATCCTTCAGAGTTCATGCATCTCACCGAGGACACCTGACCTTTT  296

Query    1  -----------------------ATGTCACCGGTCTTTCCCATGTTAACAGTTCTGACCATGTTTTATTATATA  51
                                   ||||||||.|||||||||||||||||||||||||||||||||||||||||.
Sbjct  297  GAAGCTTCATAATTCACGACTAGATGTCACCAGTCTTTCCCATGTTAACAGTTCTGACCATGTTTTATTATATG  370

Query   52  TGCCTTCGGCGCCGAGCCAGGACAGCTACAAGAGGAGAAATGATGAACACCCATAGAGCTATAGAATCAAACAG  125
            |||||||||||.||||||||||||||||||||||||||.||||||||||.||||||..||||||..||||||||
Sbjct  371  TGCCTTCGGCGTCGAGCCAGGACAGCTACAAGAGGAGATATGATGAACAGCCATAGGACTATAGTGTCAAACAG  444

Query  126  CCAGACTTCCCCTCTCAATGCAGAGGTAGTCCAGTATGCCAAAGAAGTAGTGGATTTCAGTTCCCATTATGGAA  199
            ||.||||||||||||||||||||||||.|||||||||||.||||||||.||||||||||||||||||||.||.|
Sbjct  445  CCGGACTTCCCCTCTCAATGCAGAGGTGGTCCAGTATGCTAAAGAAGTGGTGGATTTCAGTTCCCATTACGGCA  518

Query  200  GTGAGAATAGTATGTCCTATACTATGTGGAATTTGGCTGGTGTACCAAATGTATTCCCAAGTTCTGGTGACTTT  273
            |||||||.||||||||||||||.||||||||||||||.||||||||||||||.||||||||||||||||||||.
Sbjct  519  GTGAGAACAGTATGTCCTATACCATGTGGAATTTGGCAGGTGTACCAAATGTCTTCCCAAGTTCTGGTGACTTC  592

Query  274  ACTCAGACAGCTGTGTTTCGAACTTATGGGACATGGTGGGATCAGTGTCCTAGTGCTTCCTTGCCATTCAAGAG  347
            ||.|||||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||..||
Sbjct  593  ACGCAGACGGCTGTGTTTCGAACTTATGGGACGTGGTGGGATCAGTGTCCTAGTGCTTCCTTGCCATTCAGAAG  666

Query  348  GACGCCACCTAATTTTCAGAGCCAGGACTATGTGGAACTTACTTTTGAACAACAGGTGTATCCTACAGCTGTAC  421
            |||.||..|.|.|||.|||||||||||||||||||||||.||||||||.||.||.|||||.||.||.|||||.|
Sbjct  667  GACACCGTCCAGTTTCCAGAGCCAGGACTATGTGGAACTGACTTTTGAGCAGCAAGTGTACCCCACGGCTGTCC  740

Query  422  ATGTTCTAGAAACCTATCATCCCGGAGCAGTCATTAGAATTCTCGCTTGTTCTGCAAATCCTTATTCCCCAAAT  495
            ||||.||.||.||.||.|||||.|||||||||||.||||||||.||.||.||.||||||||.||.|||||||||
Sbjct  741  ATGTGCTGGAGACTTACCATCCTGGAGCAGTCATCAGAATTCTGGCCTGCTCAGCAAATCCCTACTCCCCAAAT  814

Query  496  CCACCAGCTGAAGTAAGATGGGAGATTCTTTGGTCAGAGAGACCTACGAAGGTGAATGCTTCCCAAGCTCGCCA  569
            ||.|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||.|||||.||
Sbjct  815  CCTCCAGCTGAAGTAAGATGGGAGATTCTTTGGTCAGAGAGACCTATGAAGGTGAATGCTTCCCAGGCTCGTCA  888

Query  570  GTTTAAACCTTGTATTAAGCAGATAAATTTCCCCACAAATCTTATACGACTGGAAGTAAATAGTTCTCTTCTGG  643
            |||||||||||||||||||||.|||||||||||.|||||.||.||||||||||||||.||||||||||||||||
Sbjct  889  GTTTAAACCTTGTATTAAGCAAATAAATTTCCCTACAAACCTCATACGACTGGAAGTCAATAGTTCTCTTCTGG  962

Query  644  AATATTACACTGAATTAGATGCAGTTGTGCTACATGGTGTGAAGGACAAGCCAGTGCTTTCTCTCAAGACTTCA  717
            |.||||||||.|||.||||||||||||||||.||||||..|||||||||||||.||||.||||||||||||.|.
Sbjct  963  ATTATTACACCGAACTAGATGCAGTTGTGCTGCATGGTACGAAGGACAAGCCACTGCTCTCTCTCAAGACTGCT  1036

Query  718  CTTATTGACATGAATGATATAGAAGATGATGCCTATGCAGAAAAGGATGGTTGTGGAATGGACAGTCTTAACAA  791
            |||.|.||||||||||||.||||||||||.|.|||||.|||.||||||||.||||..|||||...|||||||||
Sbjct 1037  CTTGTAGACATGAATGATCTAGAAGATGACGACTATGAAGAGAAGGATGGCTGTGAGATGGATGCTCTTAACAA  1110

Query  792  AAAGTTTAGCAGTGCTGTCCTCGGGGAAGGGCCAAATAATGGGTATTTTGATAAACTACCTTATGAGCTTATTC  865
            |||||||||||||||||.|||.|||||.||||||.||||||||||||||||.||||||||.||||         
Sbjct 1111  AAAGTTTAGCAGTGCTGCCCTTGGGGATGGGCCACATAATGGGTATTTTGACAAACTACCATATG---------  1175

Query  866  AGCTGATTCTGAATCATCTTACACTACCAGACCTGTGTAGATTAGCACAGACTTGCAAACTACTGAGCCAGCAT  939
                                        ||||||||||||||||||.||||||||||..||.||...|||||||
Sbjct 1176  ----------------------------AGACCTGTGTAGATTAGCCCAGACTTGCAGGCTTCTCCACCAGCAT  1221

Query  940  TGCTGTGATCCTCTGCAATACATCCACCTCAATCTGCAACCATACTGGGCAAAACTAGATGACACTTCTCTGGA  1013
            ||||||||||||||||||||.|||||||||||.|||||.|||||||||||....||.||.|||||.||.|||||
Sbjct 1222  TGCTGTGATCCTCTGCAATATATCCACCTCAACCTGCAGCCATACTGGGCCCGGCTGGACGACACGTCACTGGA  1295

Query 1014  ATTTCTACAGTCTCGCTGCACTCTTGTCCAGTGGCTTAATTTATCTTGGACTGGCAATAGAGGCTTCATCTCTG  1087
            .||.||||||.|||||||....||||||||||||||||||.|.||||||||||||||.|||||.||||||||||
Sbjct 1296  GTTCCTACAGGCTCGCTGTGTGCTTGTCCAGTGGCTTAATCTGTCTTGGACTGGCAACAGAGGGTTCATCTCTG  1369

Query 1088  TTGCAGGATTTAGCAGGTTTCTGAAGGTTTGTGGATCCGAATTAGTACGCCTTGAATTGTCTTGCAGCCACTTT  1161
            |..|||||||||||||||||||.|||||.|||||.||.||.||||||||||||||.||.||.||||||||||||
Sbjct 1370  TATCAGGATTTAGCAGGTTTCTAAAGGTGTGTGGGTCTGAGTTAGTACGCCTTGAGTTATCCTGCAGCCACTTT  1443

Query 1162  CTTAATGAAACTTGCTTAGAAGTTATTTCTGAGATGTGTCCAAATCTACAGGCCTTAAATCTCTCCTCCTGTGA  1235
            ||||||||.||||||||.||.|||||||||||.|||||.|||||||||||.|.||||||||||||.|||||.||
Sbjct 1444  CTTAATGACACTTGCTTGGAGGTTATTTCTGAAATGTGCCCAAATCTACAAGACTTAAATCTCTCATCCTGCGA  1517

Query 1236  TAAGCTACCACCTCAAGCTTTCAACCACATTGCCAAGTTATGCAGCCTTAAACGACTTGTTCTCTATCGAACAA  1309
            |||.||.||||||||.|||||...|||.||||||||||||||||||||.||..|.||||||||||||||.||||
Sbjct 1518  TAAACTCCCACCTCAGGCTTTTGGCCATATTGCCAAGTTATGCAGCCTCAAGAGGCTTGTTCTCTATCGGACAA  1591

Query 1310  AAGTAGAGCAAACAGCACTGCTCAGCATTTTGAACTTCTGTTCAGAGCTTCAGCACCTCAGTTTAGGCAGTTGT  1383
            |||||||||||||||||||.||.||||||||||||||||||.|||||||||||||||||||..|.|||||.|||
Sbjct 1592  AAGTAGAGCAAACAGCACTACTGAGCATTTTGAACTTCTGTGCAGAGCTTCAGCACCTCAGCCTGGGCAGCTGT  1665

Query 1384  GTCATGATTGAAGACTATGATGTGATAGCTAGCATGATAGGAGCCAAGTGTAAAAAACTCCGGACCCTGGATCT  1457
            ||.|||||||||||.||||||||||||||.||||||||||||||||||||||||||.||.|||||..|||||||
Sbjct 1666  GTGATGATTGAAGATTATGATGTGATAGCCAGCATGATAGGAGCCAAGTGTAAAAACCTGCGGACTTTGGATCT  1739

Query 1458  GTGGAGATGTAAGAATATTACTGAGAATGGAATAGCAGAACTGGCTTCTGGGTGTCCACTACTGGAGGAGCTTG  1531
            |||||||||.||||||||.||.||||||||.||||||||..||||||||||.|||...||.||.|||||.||||
Sbjct 1740  GTGGAGATGCAAGAATATCACCGAGAATGGGATAGCAGAGTTGGCTTCTGGCTGTGTTCTTCTTGAGGAACTTG  1813

Query 1532  ACCTTGGCTGGTGCCCAACTCTGCAGAGCAGCACCGGGTGCTTCACCAGACTGGCACACCAGCTCCCAAACTTG  1605
            ||||||||||||||||.||.||.|||||||||||.||||||||...|||||||||||.||||||||||||||||
Sbjct 1814  ACCTTGGCTGGTGCCCCACCCTTCAGAGCAGCACTGGGTGCTTTGTCAGACTGGCACGCCAGCTCCCAAACTTG  1887

Query 1606  CAAAAACTCTTTCTTACAGCTAATAGATCTGTGTGTGACACAGACATTGATGAATTGGCATGTAATTGTACCAG  1679
            ||.||||||||||||||||||||.||.||||||||||||||||||||.||.|||.||||||.||||||||||||
Sbjct 1888  CAGAAACTCTTTCTTACAGCTAACAGGTCTGTGTGTGACACAGACATAGAAGAACTGGCATCTAATTGTACCAG  1961

Query 1680  GTTACAGCAGCTGGACATATTAGGAACAAGAATGGTAAGTCCGGCATCCTTAAGAAAACTCCTGGAATCTTGTA  1753
            .||||||||.||||||||||||||||||||||||||||||||.||||||||.||||||||||||||||||||.|
Sbjct 1962  ATTACAGCAACTGGACATATTAGGAACAAGAATGGTAAGTCCAGCATCCTTGAGAAAACTCCTGGAATCTTGCA  2035

Query 1754  AAGATCTTTCTTTACTTGATGTGTCCTTCTGTTCGCAGATTGATAACAGAGCTGTGCTAGAACTGAATGCAAGC  1827
            ||||||||||..|||||||.||||||||||||||.|||||||||||||..||||||.||||.||.||.||.|||
Sbjct 2036  AAGATCTTTCCCTACTTGACGTGTCCTTCTGTTCCCAGATTGATAACAAGGCTGTGTTAGAGCTCAACGCGAGC  2109

Query 1828  TTTCCAAAAGTGTTCATAAAAAAGAGCTTTACTCAG--------------------------------------  1863
            |||||.|||||.||||||||.||||||||||||||.                                      
Sbjct 2110  TTTCCGAAAGTCTTCATAAAGAAGAGCTTTACTCAATGAGTTCATACTGCTCTGTCACTACAATCATGCTTTGG  2183

Query 1864  --------------------------------------------------------------------------  1863
                                                                                      
Sbjct 2184  TGGCTTCTTGTGGGGGTGGCTCTTCTGTTTGTTTGGTTTTTATAATGATGAGAATTAAGACATTTATAGAATTT  2257

Query 1864  --------------------------------------------------------------------------  1863
                                                                                      
Sbjct 2258  AAAGGAAAATGTAAAATTGTCCACTGAATCAAGTAAAAATGTAAAGAATGCTCTCTAAAATATTACAGCACTTT  2331

Query 1864  --------------------------------------------------------------------------  1863
                                                                                      
Sbjct 2332  TCTTTAGGAATGTGTAATCTCTGATATTATTTCCCATTATGTTGATCAGTGGTATGCTTTAATCAGTAATTGTA  2405

Query 1864  --------------------------------------------------------------------------  1863
                                                                                      
Sbjct 2406  TGTTAAAGGAATAATATGGAAATATTCTAATTTATTTTAAAGGAATACTTTGAAAAATAAAGTGATCATAATAT  2479

Query 1864  -----------------------------------------------  1863
                                                           
Sbjct 2480  TTATGAAAAATAAAGTTGATTTTGCACATCAAAAAAAAAAAAAAAAA  2526

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