Nucleotide Global Alignment
Description
- Query:
- TRCN0000479295
- Subject:
- XM_011535068.2
- Aligned Length:
- 2342
- Identities:
- 1225
- Gaps:
- 1111
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGTTTCGGCCTGGGGCGGCGGGGGCGGCCCAGAAAAGGCCTAGCGTCCTGGGCTGTGTGGGTGTAGCGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGGGCGCGTCGGTCTCTATGGCAACGCTCCACACGCGGAGGTCGGGTACGGTTATCTGTGGCCACAAAGAAAG 148
Query 1 --------------------------------------------------------------------ATGGAT 6
||||||
Sbjct 149 TTATTTGTCTCTGTCTTGGCAAGGCTGGGAGGAAAGTTTTAGCTAAGAAACTCAGCCCATTGGAGACCATGGAT 222
Query 7 AAGTACGATGCGATTAAGGCCATCGGGCAAGGTGCCTTCGGGAAAGCATACTTAGCTAAAGGGAAATCAGATAG 80
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAGTACGATGTGATTAAGGCCATCGGGCAAGGTGCCTTCGGGAAAGCATACTTAGCTAAAGGGAAATCAGATAG 296
Query 81 CAAGCACTGTGTCATAAAAGAGATCAATTTTGAAAAGATGCCCATACAAGAAAAAGAAGCTTCAAAGAAAGAAG 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAAGCACTGTGTCATAAAAGAGATCAATTTTGAAAAGATGCCCATACAAGAAAAAGAAGCTTCAAAGAAAGAAG 370
Query 155 TGATTCTTCTGGAAAAGATGAAACATCCCAACATTGTAGCCTTCTTCAATTCATTTCAAGAGAATGGCAGGCTG 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGATTCTTCTGGAAAAGATGAAACATCCCAACATTGTAGCCTTCTTCAATTCATTTCAAGAGAATGGCAGGCTG 444
Query 229 TTTATTGTAATGGAATATTGTGATGGAGGGGATCTCATGAAAAGGATCAATAGACAACGGGGTGTGTTATTTAG 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTTATTGTAATGGAATATTGTGATGGAGGGGATCTCATGAAAAGGATCAATAGACAACGGGGTGTGTTATTTAG 518
Query 303 TGAAGATCAGATCCTCGGTTGGTTTGTACAGATTTCTCTAGGACTAAAACATATTCATGACAGGAAGATATTAC 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGAAGATCAGATCCTCGGTTGGTTTGTACAGATTTCTCTAGGACTAAAACATATTCATGACAGGAAGATATTAC 592
Query 377 ACAGGGACATAAAAGCTCAGAACATTTTTCTTAGCAAGAACGGAATGGTGGCAAAGCTTGGGGACTTTGGTATA 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACAGGGACATAAAAGCTCAGAACATTTTTCTTAGCAAGAACGGAATGGTGGCAAAGCTTGGGGACTTTGGTATA 666
Query 451 GCAAGAGTCCTGAATAATTCCATGGAACTTGCTCGAACTTGTATTGGAACACCTTACTACCTGTCCCCAGAGAT 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCAAGAGTCCTGAATAATTCCATGGAACTTGCTCGAACTTGTATTGGAACACCTTACTACCTGTCCCCAGAGAT 740
Query 525 CTGTCAGAATAAACCCTACAACAATAAAACGGATATTTGGTCTCTTGGCTGTGTCTTATATGAGCTCTGCACAC 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTGTCAGAATAAACCCTACAACAATAAAACGGATATTTGGTCTCTTGGCTGTGTCTTATATGAGCTCTGCACAC 814
Query 599 TTAAACATCCTTTTGAGGGTAACAACTTACAGCAGCTGGTTCTGAAGATTTGTCAAGCACATTTTGCCCCAATA 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTAAACATCCTTTTGAGGGTAACAACTTACAGCAGCTGGTTCTGAAGATTTGTCAAGCACATTTTGCCCCAATA 888
Query 673 TCTCCGGGGTTTTCTCGTGAGCTCCATTCCTTGATATCTCAGCTCTTTCAAGTATCTCCTCGAGACCGACCATC 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TCTCCGGGGTTTTCTCGTGAGCTCCATTCCTTGATATCTCAGCTCTTTCAAGTATCTCCTCGAGACCGACCATC 962
Query 747 CATAAATTCCATTTTGAAAAGGCCCTTTTTAGAGAATCTTATTCCCAAATATTTGACTCCTGAGGTCATTCAGG 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CATAAATTCCATTTTGAAAAGGCCCTTTTTAGAGAATCTTATTCCCAAATATTTGACTCCTGAGGTCATTCAGG 1036
Query 821 AAGAATTCAGTCACATGCTTATATGCAGAGCAGGAGCGCCAGCTTCTCGACATGCTGGGAAGGTGGTCCAGAAG 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AAGAATTCAGTCACATGCTTATATGCAGAGCAGGAGCGCCAGCTTCTCGACATGCTGGGAAGGTGGTCCAGAAG 1110
Query 895 TGTAAAATACAAAAAGTGAGATTCCAGGGAAAGTGCCCACCAAGATCAAGGATATCTGTGCCAATTAAAAGGAA 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGTAAAATACAAAAAGTGAGATTCCAGGGAAAGTGCCCACCAAGATCAAGGATATCTGTGCCAATTAAAAGGAA 1184
Query 969 TGCTATATTGCATAGAAATGAATGGAGACCACCAGCTGGAGCCCAGAAGGCCAGATCTATAAAAATGATAGAAA 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGCTATATTGCATAGAAATGAATGGAGACCACCAGCTGGAGCCCAGAAGGCCAGATCTATAAAAATGATAGAAA 1258
Query 1043 GACCCAAAATTGCTGCTGTCTGTGGACATTATGATTATTATTATGCTCAACTTGATATGCTGAGGAGGAGAGCC 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GACCCAAAATTGCTGCTGTCTGTGGACATTATGATTATTATTATGCTCAACTTGATATGCTGAGGAGGAGAGCC 1332
Query 1117 CACAAACCAAGTTATCACCCTATTCCTCAAGAAAATACTGGAGTTGAGGATTACGGTCAGGAAACGAGGCATGG 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CACAAACCAAGTTATCACCCTATTCCTCAAGAAAATACTGGAGTTGAGGATTACGGTCAGGAAACGAGGCATGG 1406
Query 1191 TCCATCCCCAAGTCAATGGCCTGCTGAGTACCTTCAG--AGAAAATTTGAAGCTCAACAATATAAGTTGAAAGT 1262
||||||||||||||||||| |..|||.| |.|||| |||.| |||
Sbjct 1407 TCCATCCCCAAGTCAATGG----------AAATTCTGCCAAAAAA----AAGAT--ACA--------------- 1449
Query 1263 GGAGAAGCAATTGGGTCTTCGTCCATCTTCTGCCGAGCCAAATTACAACCAGAGACAAGAGCTAAGAAGTAATG 1336
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1337 GAGAAGAGCCTAGATTCCAGGAGCTGCCATTTAGGAAAAACGAAATGAAGGAACAGGAATATTGGAAGCAGTTA 1410
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1411 GAGGAAATACGCCAACAGTACCACAATGACATGAAAGAAATTAGAAAGAAGATGGGGAGAGAACCAGAGGAGAA 1484
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1485 CTCAAAAATAAGTCATAAAACCTATTTGGTGAAGAAGAGTAACCTGCCTGTCCATCAAGATGCATCTGAGGGAG 1558
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1559 AAGCACCTGTGCAGATGGAATTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCACGATCTTGGCTCACCGCA 1632
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1633 ACCTCCGCCTCCCAGGACATTGAAAAAGACTTGAAACAAATGAGGCTTCAGAACACAAAGGAAAGTAAAAATCC 1706
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1707 AGAACAGAAATATAAAGCTAAGAAGGGGGTAAAATTTGAAATTAATTTAGACAAATGTATTTCTGATGAAAACA 1780
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1781 TCCTCCAAGAGGAAGAGGCAATGGATATACCAAATGAAACTTTGACCTTTGAGGATGGCATGAAGTTTAAGGAA 1854
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1855 TATGAATGTGTAAAGGAGCATGGAGATTATACAGACAAAGCATTTGAAAAACTTCACTGCCCAGAAGCAGGGTT 1928
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1929 TTCCACGCAGACTGTAGCTGCTGTGGGAAACAGGAGGCAGTGGGATGGAGGAGCGCCTCAGACTCTGCTGCAGA 2002
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 2003 TGATGGCAGTGGCCGACATCACCTCCACCTGCCCCACGGGGCCTGACAGTGAGTCTGTGCTTAGCGTCAGTCGT 2076
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 2077 CAGGAAGGGAAGACCAAGGACCCGTACAGCCCAGTGCTCATCCTGATG 2124
Sbjct 1450 ------------------------------------------------ 1449
