Nucleotide Global Alignment
Description
- Query:
- TRCN0000479297
- Subject:
- NM_001349784.2
- Aligned Length:
- 4149
- Identities:
- 2234
- Gaps:
- 1914
Alignment
Query 1 ATGTATGCCACTGATTCCAGGGGACACTCCCCTGCTTTCCTCCAACCTCAGAATGGAAATAGTCGTCACCCATC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGGCTATGTTCCAGGGAAGGTTGTCCCATTGCGTCCCCCTCCTCCTCCAAAGAGTCAAGCTTCAGCCAAATTTA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCTCCATCAGACGAGAAGACCGGGCAACCTTCGCATTCTCACCTGAAGAACAGCAAGCCCAGAGAGAAAGTCAA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AAGCAAAAGAGACACAAAAATACTTTCATTTGTTTTGCTATTACTAGTTTCTCATTTTTTATTGCACTTGCAAT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CATTTTAGGAATATCCTCAAAATATGCTCCAGATGAAAATTGCCCAGATCAAAATCCTCGTCTCAGGAATTGGG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ATCCAGGACAAGATTCTGCAAAGCAAGTTGTTATCAAGGAGGGAGATATGCTCCGTCTGACCTCAGACGCCACC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GTGCATTCTATAGTCATTCAGGATGGAGGACTGCTTGTATTTGGGGACAATAAAGATGGATCCAGAAATATTAC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TTTGAGGACTCATTACATCCTGATCCAGGATGGTGGGGCGCTTCATATTGGAGCAGAAAAATGCCGCTATAAAT 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CCAAAGCGACAATTACCTTGTATGGCAAGTCAGATGAAGGTGAAAGTATGCCAACATTTGGCAAAAAGTTTATT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GGTGTGGAAGCTGGCGGGACACTGGAGTTACATGGGGCACGGAAGGCATCGTGGACGTTGTTGGCAAGGACCCT 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GAATTCCTCAGGCTTGCCCTTTGGGTCCTATACCTTTGAAAAGGACTTTTCCCGGGGCCTCAATGTGAGGGTCA 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TTGACCAAGACACGGCCAAAATTTTGGAAAGTGAGAGATTTGATACCCATGAATACCGCAATGAGAGCAGGCGG 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 CTTCAGGAGTTTCTGAGATTCCAGGATCCAGGTCGGATTGTTGCCATAGCTGTCGGGGATTCAGCCGCTAAAAG 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 TCTCTTACAAGGAACCATCCAGATGATCCAGGAACGGTTGGGAAGTGAACTGATCCAAGGACTGGGCTACAGGC 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 AAGCTTGGGCTTTAGTTGGTGTCATTGATGGTGGAAGCACTTCTTGCAATGAATCCGTGAGAAACTATGAAAAT 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 CATAGCAGTGGCGGGAAGGCTCTTGCCCAAAGAGAATTTTATACTGTGGATGGCCAGAAGTTCTCTGTGACAGC 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 TTATAGTGAATGGATTGAAGGCGTTTCTCTTTCAGGATTCCGGGTAGAGGTTGTAGATGGAGTGAAGCTAAATT 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 TGCTAGATGATGTTAGTAGTTGGAAACCTGGAGACCAGATTGTGGTCGCAAGCACAGACTATTCCATGTACCAA 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 GCAGAGGAGTTCACTCTTCTTCCCTGTTCTGAATGCAGCCATTTTCAGGTCAAAGTCAAAGAAACCCCTCAGTT 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 CCTGCACATGGGTGAGATCATAGACGGTGTAGACATGAGAGCTGAGGTTGGAATTCTTACCCGGAATATTGTGA 1480
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1481 TCCAAGGAGAAGTGGAGGACTCATGCTACGCAGAAAATCAGTGCCAATTTTTTGATTATGATACCTTTGGGGGA 1554
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1555 CACATTATGATAATGAAAAATTTTACTTCAGTCCATCTTTCTTATGTGGAATTGAAACACATGGGTCAGCAGCA 1628
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1629 GATGGGGCGATACCCTGTTCATTTTCACCTGTGTGGTGACGTGGATTATAAAGGAGGATACAGACATGCAACAT 1702
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1703 TTGTGGACGGCCTGTCTATTCATCACAGCTTCTCAAGGTGCATCACTGTGCATGGGACAAATGGCTTGCTAATA 1776
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1777 AAAGACACCATTGGGTTTGACACACTAGGTCATTGTTTCTTTTTGGAAGATGGTATTGAACAGAGGAATACTTT 1850
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1851 GTTCCACAATCTGGGACTCCTCACCAAGCCGGGTACTCTCCTGCCCACCGATAGGAACAACTCCATGTGTACCA 1924
||||||||||
Sbjct 1 ----------------------------------------------------------------ATGTGTACCA 10
Query 1925 CCATGCGAGATAAAGTGTTTGGAAATTACATTCCTGTGCCTGCTACTGACTGTATGGCTGTTTCAACTTTCTGG 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11 CCATGCGAGATAAAGTGTTTGGAAATTACATTCCTGTGCCTGCTACTGACTGTATGGCTGTTTCAACTTTCTGG 84
Query 1999 ATTGCTCATCCCAACAATAATCTGATTAATAATGCAGCTGCAGGCTCACAGGATGCTGGAATATGGTATTTATT 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 85 ATTGCTCATCCCAACAATAATCTGATTAATAATGCAGCTGCAGGCTCACAGGATGCTGGAATATGGTATTTATT 158
Query 2073 CCACAAGGAACCAACTGGGGAATCCAGTGGATTGCAGCTCTTGGCAAAACCAGAACTCACTCCATTGGGTATAT 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 159 CCACAAGGAACCAACTGGGGAATCCAGTGGATTGCAGCTCTTGGCAAAACCAGAACTCACTCCATTGGGTATAT 232
Query 2147 TTTATAACAACAGGGTCCATTCAAATTTTAAGGCTGGCTTATTTATTGACAAAGGTGTCAAAACAACCAACTCT 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 233 TTTATAACAACAGGGTCCATTCAAATTTTAAGGCTGGCTTATTTATTGACAAAGGTGTCAAAACAACCAACTCT 306
Query 2221 AGTGCTGCTGACCCAAGGGAATACCTCTGTTTGGACAATAGTGCAAGATTTCGACCTCATCAGGATGCAAACCC 2294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 307 AGTGCTGCTGACCCAAGGGAATACCTCTGTTTGGACAATAGTGCAAGATTTCGACCTCATCAGGATGCAAACCC 380
Query 2295 CGAAAAACCACGTGTTGCTGCTCTAATTGACAGGCTCATTGCTTTTAAAAATAATGATAATGGAGCTTGGGTCA 2368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 381 CGAAAAACCACGTGTTGCTGCTCTAATTGACAGGCTCATTGCTTTTAAAAATAATGATAATGGAGCTTGGGTCA 454
Query 2369 GAGGAGGAGATATTATCGTTCAAAATTCAGCATTTGCAGATAATGGAATAGGACTGACCTTTGCCAGTGATGGA 2442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 455 GAGGAGGAGATATTATCGTTCAAAATTCAGCATTTGCAGATAATGGAATAGGACTGACCTTTGCCAGTGATGGA 528
Query 2443 AGCTTCCCAAGTGATGAAGGTTCCAGCCAAGAGGTATCTGAATCTCTCTTTGTTGGGGAGAGCAGGAATTACGG 2516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 529 AGCTTCCCAAGTGATGAAGGTTCCAGCCAAGAGGTATCTGAATCTCTCTTTGTTGGGGAGAGCAGGAATTACGG 602
Query 2517 CTTTCAGGGTGGTCAGAACAAGTATGTAGGCACTGGAGGAATAGACCAGAAGCCTCGAACATTACCCAGGAACA 2590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 603 CTTTCAGGGTGGTCAGAACAAGTATGTAGGCACTGGAGGAATAGACCAGAAGCCTCGAACATTACCCAGGAACA 676
Query 2591 GGACGTTCCCAATTAGAGGCTTTCAGATTTATGATGGGCCCATTCATCTCACAAGGAGCACTTTCAAAAAATAT 2664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 677 GGACGTTCCCAATTAGAGGCTTTCAGATTTATGATGGGCCCATTCATCTCACAAGGAGCACTTTCAAAAAATAT 750
Query 2665 GTGCCAACTCCAGATAGGTACAGCAGTGCAATTGGCTTCCTCATGAAGAATTCCTGGCAGATAACCCCCAGGAA 2738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 751 GTGCCAACTCCAGATAGGTACAGCAGTGCAATTGGCTTCCTCATGAAGAATTCCTGGCAGATAACCCCCAGGAA 824
Query 2739 TAATATCTCCCTCGTGAAGTTTGGTCCACATGTCTCTCTGAATGTCTTTTTTGGAAAGCCTGGTCCCTGGTTTG 2812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 825 TAATATCTCCCTCGTGAAGTTTGGTCCACATGTCTCTCTGAATGTCTTTTTTGGAAAGCCTGGTCCCTGGTTTG 898
Query 2813 AAGATTGTGAGATGGATGGTGATAAGAACTCCATATTCCATGACATTGATGGCTCTGTGACAGGATACAAGGAT 2886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 AAGATTGTGAGATGGATGGTGATAAGAACTCCATATTCCATGACATTGATGGCTCTGTGACAGGATACAAGGAT 972
Query 2887 GCTTATGTGGGAAGAATGGACAACTACCTGATCCGCCATCCAAGCTGTGTAAATGTGTCTAAGTGGAATGCAGT 2960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 973 GCTTATGTGGGAAGAATGGACAACTACCTGATCCGCCATCCAAGCTGTGTAAATGTGTCTAAGTGGAATGCAGT 1046
Query 2961 GATCTGCAGTGGGACCTATGCACAGGTCTATGTACAGACATGGAGCACTCAGAATCTTTCTATGACCATTACAC 3034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1047 GATCTGCAGTGGGACCTATGCACAGGTCTATGTACAGACATGGAGCACTCAGAATCTTTCTATGACCATTACAC 1120
Query 3035 GAGATGAGTATCCGTCCAACCCTATGGTGCTCCGAGGTATTAATCAGAAGGCTGCCTTTCCACAGTACCAGCCT 3108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1121 GAGATGAGTATCCGTCCAACCCTATGGTGCTCCGAGGTATTAATCAGAAGGCTGCCTTTCCACAGTACCAGCCT 1194
Query 3109 GTCGTCATGCTGGAGAAGGGTTATACCATCCACTGGAATGGGCCGGCACCACGGACTACATTTCTATACCTCGT 3182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 GTCGTCATGCTGGAGAAGGGTTATACCATCCACTGGAATGGGCCGGCACCACGGACTACATTTCTATACCTCGT 1268
Query 3183 CAACTTCAACAAGAATGACTGGATTCGAGTTGGCCTTTGCTATCCATCAAACACAAGTTTTCAAGTTACCTTTG 3256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1269 CAACTTCAACAAGAATGACTGGATTCGAGTTGGCCTTTGCTATCCATCAAACACAAGTTTTCAAGTTACCTTTG 1342
Query 3257 GCTATTTGCAGCGGCAGAATGGCTCATTATCCAAAATCGAAGAATATGAGCCTGTGCATTCACTGGAAGAACTG 3330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1343 GCTATTTGCAGCGGCAGAATGGCTCATTATCCAAAATCGAAGAATATGAGCCTGTGCATTCACTGGAAGAACTG 1416
Query 3331 CAAAGAAAGCAATCCGAGAGGAAATTCTATTTTGACTCCAGCACGGGGTTACTGTTTTTGTATCTCAAAGCCAA 3404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1417 CAAAGAAAGCAATCCGAGAGGAAATTCTATTTTGACTCCAGCACGGGGTTACTGTTTTTGTATCTCAAAGCCAA 1490
Query 3405 AAGCCACAGGCATGGCCACAGTTACTGTTCATCTCAGGGATGTGAAAGAGTCAAGATCCAAGCAGCCACAGACT 3478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1491 AAGCCACAGGCATGGCCACAGTTACTGTTCATCTCAGGGATGTGAAAGAGTCAAGATCCAAGCAGCCACAGACT 1564
Query 3479 CAAAGGACATCAGTAACTGCATGGCCAAAGCATACCCACAGTACTACAGAAAGCCGTCAGTGGTCAAGCGGATG 3552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1565 CAAAGGACATCAGTAACTGCATGGCCAAAGCATACCCACAGTACTACAGAAAGCCGTCAGTGGTCAAGCGGATG 1638
Query 3553 CCGGCCATGCTCACTGGACTCTGTCAAGGCTGTGGCACTCGGCAGGTGGTGTTTACTAGTGATCCTCATAAAAG 3626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1639 CCGGCCATGCTCACTGGACTCTGTCAAGGCTGTGGCACTCGGCAGGTGGTGTTTACTAGTGATCCTCATAAAAG 1712
Query 3627 TTACCTCCCTGTGCAATTCCAGTCACCTGATAAAGCAGAAACCCAGCGTGGAGACCCGTCTGTTATTTCTGTCA 3700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1713 TTACCTCCCTGTGCAATTCCAGTCACCTGATAAAGCAGAAACCCAGCGTGGAGACCCGTCTGTTATTTCTGTCA 1786
Query 3701 ATGGCACTGACTTTACCTTCCGAAGTGCAGGCGTCCTCCTCCTTGTTGTGGATCCGTGCAGCGTTCCATTCCGC 3774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1787 ATGGCACTGACTTTACCTTCCGAAGTGCAGGCGTCCTCCTCCTTGTTGTGGATCCGTGCAGCGTTCCATTCCGC 1860
Query 3775 TTGACGGAAAAAACGGTTTTTCCTCTTGCTGATGTCAGTCGCATTGAAGAGTATTTAAAAACAGGCATCCCTCC 3848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1861 TTGACGGAAAAAACGGTTTTTCCTCTTGCTGATGTCAGTCGCATTGAAGAGTATTTAAAAACAGGCATCCCTCC 1934
Query 3849 AAGGTCCATTGTTCTGTTGAGCACAAGAGGAGAAATAAAGCAGTTAAACATTTCACACTTACTAGTACCTCTGG 3922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1935 AAGGTCCATTGTTCTGTTGAGCACAAGAGGAGAAATAAAGCAGTTAAACATTTCACACTTACTAGTACCTCTGG 2008
Query 3923 GATTATCCAAACCAGCTCATCTTTATGACAAAGGGAGTACCATATTTTTGGGATTCAGTGGAAACTTTAAACCA 3996
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2009 GATTAGCCAAACCAGCTCATCTTTATGACAAAGGGAGTACCATATTTTTGGGATTCAGTGGAAACTTTAAACCA 2082
Query 3997 TCATGGACTAAGCTATTTACCAGTCCTGCTGGACAGGGCCTTGGGGTGCTTGAACAATTCATACCTTTGCAGCT 4070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2083 TCATGGACTAAGCTATTTACCAGTCCTGCTGGACAGGGCCTTGGGGTGCTTGAACAATTCATACCTTTGCAGCT 2156
Query 4071 GGACGAATATGGTTGTCCCAGAGCCACCACTGTCCGCAGAAGAGACCTGGAACTGCTAAAGCAAGCTTCAAAAG 4144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2157 GGACGAATATGGTTGTCCCAGAGCCACCACTGTCCGCAGAAGAGACCTGGAACTGCTAAAGCAAGCTTCAAAAG 2230
Query 4145 CACAT 4149
|||||
Sbjct 2231 CACAT 2235
