Nucleotide Global Alignment

Description

Query:
TRCN0000479326
Subject:
XM_011523235.1
Aligned Length:
2070
Identities:
1974
Gaps:
96

Alignment

Query    1  ATGGGTGGGCACCTGTCCCCATGGCCCACATACACCAGTGGCCAGACCATTTTGCAAAATCGAAAACCCTGTTC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGTGGGCACCTGTCCCCATGGCCCACATACACCAGTGGCCAGACCATTTTGCAAAATCGAAAACCCTGTTC  74

Query   75  AGATGACTACCGGAAGCGAGTAGGGAGCTGCCAGCAGCACCCCTTTCGCACTGCCAAGCCCCAGTACTTGGAGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AGATGACTACCGGAAGCGAGTAGGGAGCTGCCAGCAGCACCCCTTTCGCACTGCCAAGCCCCAGTACTTGGAGG  148

Query  149  AACTGGAAAACTACCTACGCAAGGAGCTCCTCCTGCTGGACCTGGGCACAGATTCCACCCAGGAACTAAGGCTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AACTGGAAAACTACCTACGCAAGGAGCTCCTCCTGCTGGACCTGGGCACAGATTCCACCCAGGAACTAAGGCTG  222

Query  223  CAGCCTTACAGAGAGATCTTTGAGTTCTTCATAGAGGACTTCAAAACGTACAAGCCATTACTATCCTCCATCAA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAGCCTTACAGAGAGATCTTTGAGTTCTTCATAGAGGACTTCAAAACGTACAAGCCATTACTATCCTCCATCAA  296

Query  297  GAATGCGTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGATTCGGGCTCTGGAGCCCCTGAAGGCCAAGCTTG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAATGCGTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGATTCGGGCTCTGGAGCCCCTGAAGGCCAAGCTTG  370

Query  371  TCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGAAATATGAAATCTCCCTGCTC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGAAATATGAAATCTCCCTGCTC  444

Query  445  AAGAAAGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGAGGT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAGAAAGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGAGGT  518

Query  519  GACCAAACTGAGGAAGAACTTGGCTGAGGAGTACCTGCACTACCTCAGTGAGCGAGATGCCTGTAAGATCCTCA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GACCAAACTGAGGAAGAACTTGGCTGAGGAGTACCTGCACTACCTCAGTGAGCGAGATGCCTGTAAGATCCTCA  592

Query  593  TCGCAGACCTGAATGAGCTGCGGTACCAGCGGGAGGACATGTCATTAGCCCAGTCGCCAGGCATCTGGGGGGAG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCGCAGACCTGAATGAGCTGCGGTACCAGCGGGAGGACATGTCATTAGCCCAGTCGCCAGGCATCTGGGGGGAG  666

Query  667  GACCCTGTGAAGTTAACCCTGGCTCTTAAGATGACCCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GACCCTGTGAAGTTAACCCTGGCTCTTAAGATGACCCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAA  740

Query  741  CATGAAGGCCAACTTTGGAGATGTGGTCCCCAGGAGGGACTTTGAAATGCAGGAGAAGACCAACAAGGATCTTC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CATGAAGGCCAACTTTGGAGATGTGGTCCCCAGGAGGGACTTTGAAATGCAGGAGAAGACCAACAAGGATCTTC  814

Query  815  AGGAG---------------------CAGCTGGACACCCTGAGAGCCAGCTACGAGGAGGTTCGCAAGGAGCAT  867
            |||||                     ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGGAGCAGGGCCAATGTCCTTGCCCACAGCTGGACACCCTGAGAGCCAGCTACGAGGAGGTTCGCAAGGAGCAT  888

Query  868  GAGATCCTCATGCAGCTGCACATGAGCACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCA  941
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GAGATCCTCATGCAGCTGCACATGAGCACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCA  962

Query  942  GCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGCAA-----------------------------------  980
            |||||||||||||||||||||||||||||||||||||||                                   
Sbjct  963  GCGCACTTCCACGCCGCGGCCTGACTGGACCAAGTGCAAAGGTGAGGGCAGCCGGCAGGGCCCCAGGTCCTGCT  1036

Query  981  ----------------------------------------AGATGTGGTGGCTGGGGGCCCAGAGCGCTGGCAG  1014
                                                    ||||||||||||||||||||||||||||||||||
Sbjct 1037  TACATGTGGGCCCAGACTCCAGCTCCCTCTCCCCACATGCAGATGTGGTGGCTGGGGGCCCAGAGCGCTGGCAG  1110

Query 1015  ATGCTGGCTGAGGGCAAGAACAGCGACCAGCTGGTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCG  1088
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  ATGCTGGCTGAGGGCAAGAACAGCGACCAGCTGGTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCG  1184

Query 1089  GGAGAAAGACTTCTTCCCTGGTCTGGGCTATGGGGAAGCCATCCCTGCTTTTCTTCGGTTTGATGGCCTCGTGG  1162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GGAGAAAGACTTCTTCCCTGGTCTGGGCTATGGGGAAGCCATCCCTGCTTTTCTTCGGTTTGATGGCCTCGTGG  1258

Query 1163  AGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCCTGGAAGGAACGTCTTGCTGAGGAG  1236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AGAACAAGAAGCCAAGCAAGAAGGACGTGGTCAACCTCCTCAAGGATGCCTGGAAGGAACGTCTTGCTGAGGAG  1332

Query 1237  CAGAAAGAGACGTTCCCAGATTTCTTCTTCAATTTCCTGGAGCATCGCTTTGGGCCCAGTGATGCCATGGCCTG  1310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CAGAAAGAGACGTTCCCAGATTTCTTCTTCAATTTCCTGGAGCATCGCTTTGGGCCCAGTGATGCCATGGCCTG  1406

Query 1311  GGCTTATACTATTTTTGAAAATATCAAGATCTTCCACTCCAACGAGGTTATGAGTCAGTTCTATGCAGTCTTGA  1384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GGCTTATACTATTTTTGAAAATATCAAGATCTTCCACTCCAACGAGGTTATGAGTCAGTTCTATGCAGTCTTGA  1480

Query 1385  TGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGCCCAGCTGCTGAAGGAGATGACAAAT  1458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TGGGAAAGCGGAGTGAGAATGTGTATGTCACCCAGAAGGAGACAGTAGCCCAGCTGCTGAAGGAGATGACAAAT  1554

Query 1459  GCTGACAGTCAGAACGAGGGGCTACTAACCATGGAGCAGTTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAA  1532
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GCTGACAGTCAGAACGAGGGGCTACTAACCATGGAGCAGTTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAA  1628

Query 1533  GACAGAAGAGCAAATCCAGGAGCTGATGGAGGCAGGGGGCTGGCATCCCAGCAGCAGCAATGCAGACTTGCTCA  1606
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GACAGAAGAGCAAATCCAGGAGCTGATGGAGGCAGGGGGCTGGCATCCCAGCAGCAGCAATGCAGACTTGCTCA  1702

Query 1607  ACTACCGCTCACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATAC  1680
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  ACTACCGCTCACTGTTTATGGAGGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATAC  1776

Query 1681  ATGGATGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGAAGTGACTCT  1754
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  ATGGATGAGAAGGACGAGTACTTACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGAAGTGACTCT  1850

Query 1755  GCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCC  1828
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GCCCAAGCTGCGAGGGGGCCTGATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCC  1924

Query 1829  AGGCCTTCCAGCTCCCTGAGTCGGAAATGCCAGAGGAGGGTGACGAGAAGGAAGAAGCCGTGGTGGAAATCCTC  1902
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  AGGCCTTCCAGCTCCCTGAGTCGGAAATGCCAGAGGAGGGTGACGAGAAGGAAGAAGCCGTGGTGGAAATCCTC  1998

Query 1903  CAGACTGCCCTGGAGCGGCTTCAGGTGATTGACATCAGGCGTGTGGGACCTCGAGAGCCAGAGCCTGCAAGC  1974
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  CAGACTGCCCTGGAGCGGCTTCAGGTGATTGACATCAGGCGTGTGGGACCTCGAGAGCCAGAGCCTGCAAGC  2070

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.