Nucleotide Global Alignment

Description

Query:
TRCN0000479335
Subject:
XM_006539279.3
Aligned Length:
2076
Identities:
1672
Gaps:
186

Alignment

Query    1  ATGTGGCTGCAGCAGCGGCTCAAGGGGCTGCCGGGACTGCTGTCGAGCAGCTGGGCCCGCCGCCTCCTCTGCCT  74
            |||||||||||||||||.||.||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTGGCTGCAGCAGCGCCTGAAGGGGCTGCCGGGGCTGCTGTCGAGCAGCTGGGCCCGCCGCCTCCTCTGCCT  74

Query   75  GCTTGGCCTCCTGCTGCTGCTTCTGTGGTTTGGGGGGTCCGGCGCGCGGCGGGCGGCGGGCGGCCTGCACCTGC  148
            |||.||||||.||.|||||||.||||||||.|.|.|.|||||.|||||||||||||||||||||||||||||||
Sbjct   75  GCTCGGCCTCTTGGTGCTGCTCCTGTGGTTCGCGAGCTCCGGGGCGCGGCGGGCGGCGGGCGGCCTGCACCTGC  148

Query  149  TGCCCTGGTCCCGCGGTGAGCCGGGCGCCGCCGAGCCGTCTGCCTGCCTGGAGGCGGCCACCCGCGCCTGGCGC  222
            .|.|||||.|||||.|.|||||||||||||||||||||||||||||.||||||||||||||||||||.||||||
Sbjct  149  CGTCCTGGGCCCGCAGCGAGCCGGGCGCCGCCGAGCCGTCTGCCTGTCTGGAGGCGGCCACCCGCGCGTGGCGC  222

Query  223  GGCCTGCGGGAGCGCGGTGAGGTGGTACCGCTGGGTCCTGGAGTGCCGGCCCTGGTGGCCAACGGCTTCCTGGC  296
            ||||||||.||.|||||.||||.|||.|||||.||.||.||.|||||.||||||||||||||||||||||||||
Sbjct  223  GGCCTGCGTGATCGCGGCGAGGCGGTGCCGCTTGGCCCCGGGGTGCCAGCCCTGGTGGCCAACGGCTTCCTGGC  296

Query  297  ACTGGACGTGGCTGC--CAATCGGCTGTGGGTGACTCCCGGGGAGCGGGAGCCCGCCGTGGCGCCGGACTTTGT  368
            .||||||  |.||.|  |||.||||||||||||||.|||||.|||||||||||.||||||.||||||||||.||
Sbjct  297  TCTGGAC--GCCTCCAACAACCGGCTGTGGGTGACGCCCGGAGAGCGGGAGCCTGCCGTGACGCCGGACTTCGT  368

Query  369  GCCCTTCGTGCAGCTGCGCCCGCTGAGCGCGCTGGCTGAAGCTGGAGAGGCGGTGCTGCTGCTGCGGGAGGGGC  442
            |||||||||||||||.||||||||||..|.|.||||.||.||||||||||||||||||||.|||||||||||.|
Sbjct  369  GCCCTTCGTGCAGCTACGCCCGCTGAATGTGGTGGCCGAGGCTGGAGAGGCGGTGCTGCTTCTGCGGGAGGGCC  442

Query  443  TTCTGCGCCGCGTGCGTTGCCTGCAGCTGGGGTCCCCAGGTCCTGGCCCCGTGGCCGCCGG---CCCCGGGCCC  513
            |.||||||||.|||||.|||||||||||||||.||||.||..|.|||||   .|||||.||   ||||||||||
Sbjct  443  TGCTGCGCCGAGTGCGCTGCCTGCAGCTGGGGACCCCGGGCTCGGGCCC---TGCCGCTGGTGTCCCCGGGCCC  513

Query  514  GCCTCCGTCTCTGGCCTTGCCGCGGGGTCCGGCCGCGACTGCGTGCTGCTGCAAGAGGACTTTCTGGCGCACAG  587
            |||||.|.|||.||.||..||||||||||.|||||.|||||||||||.|||||.||||||||.|||||||||.|
Sbjct  514  GCCTCGGCCTCCGGGCTCTCCGCGGGGTCGGGCCGGGACTGCGTGCTACTGCAGGAGGACTTCCTGGCGCACCG  587

Query  588  GGGCCGACCCCACGTCTACCTGCAGCGCATCCAGCTCAACAACCCCACGGAGCGCGTGGCCGCGCTGCAGACTG  661
            .|||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||||.|||||||||
Sbjct  588  AGGCCGACCCCACGTCTATCTGCAGCGCATCCAGCTCAACAATCCCACGGAGCGCGTGGCCGCGTTGCAGACTG  661

Query  662  TGGGGCCCACTGCCGGCCCAGCCCCCAAGGCCTTCACCAGTACCCTGGAGAAGGTCGGAGACCATCAGTTCCTC  735
            ||||||||||.||.|||||||.||||||..||||||||||.||||||||||||||||||||.||.|||||.|||
Sbjct  662  TGGGGCCCACCGCAGGCCCAGTCCCCAAATCCTTCACCAGCACCCTGGAGAAGGTCGGAGATCACCAGTTTCTC  735

Query  736  CTCTACTCAGGCCGGTCCCCGCCTACGCCCA-CTGGGTTGGTGCACCTGGTGGTGGTGGCCGCCAAGAAGCTGG  808
            ||||||||.|||||||||.|.|| .|..||| |.|||.||||||||.||||.||||||.||.|.||||||.|.|
Sbjct  736  CTCTACTCGGGCCGGTCCACACC-CCTTCCATCGGGGCTGGTGCACTTGGTCGTGGTGACCTCTAAGAAGTTAG  808

Query  809  TGAACCGCCTCCAAGTGGCTCCCAAGACGCAGCTGGATGAGACGGTGCTGTGGGTGGTGCACGTCTCTGGCCCC  882
            |||||.|.|||||.||||||||||||||.||||||||.||||||||||||||||||||||||.|||||||.|||
Sbjct  809  TGAACAGGCTCCAGGTGGCTCCCAAGACACAGCTGGACGAGACGGTGCTGTGGGTGGTGCACATCTCTGGTCCC  882

Query  883  ATTAACCCCCAGGTGCTCAAAAGCAAAGCAGCCAAGGAGCTCAAGGCGCTGCAGGACTTGGCACGGAAGGAAAT  956
            ||..||||||||||||||||||||||||.||||||||||||||||||||||||||||||.|||||||||||.||
Sbjct  883  ATCCACCCCCAGGTGCTCAAAAGCAAAGGAGCCAAGGAGCTCAAGGCGCTGCAGGACTTAGCACGGAAGGAGAT  956

Query  957  GCTGGAGCTCTTGGACATGCCAGCGGCGGAGCTGCTTCAAGACCACCAGCTCCTCTGGGCTCAGCTCTTCAGCC  1030
            |||||||||.|||||.|||||.||..|||||||||||||.||.||||||..|||||||||.|||||||||||.|
Sbjct  957  GCTGGAGCTGTTGGAGATGCCCGCCTCGGAGCTGCTTCAGGATCACCAGTACCTCTGGGCCCAGCTCTTCAGTC  1030

Query 1031  CAGGAGTGGAAATGAAGAAGATCACTGACACCCACACGCCGTCTGGCCTCACCGTGAACCTGACGCTCTATTAC  1104
            |.||.|||||.|||||||.||||||.||..|.||||||||.||||||||.||||||||||||||.||.||.|||
Sbjct 1031  CCGGTGTGGAGATGAAGAGGATCACGGATGCTCACACGCCATCTGGCCTGACCGTGAACCTGACCCTGTACTAC  1104

Query 1105  ATGCTCTCCTGCTCGCCAGCCCCACTGCTCAGCCCCTCCCTGAGCCACAGGGAGCGAGACCAGATGGAGTCGAC  1178
            ||||||||||||||.|||||||||||||||||||||||.||||||||||||||.||.||.|||||||||.|.||
Sbjct 1105  ATGCTCTCCTGCTCTCCAGCCCCACTGCTCAGCCCCTCTCTGAGCCACAGGGAACGCGAGCAGATGGAGGCAAC  1178

Query 1179  GCTCAACTATGAAGATCACTGCTTCAGCGGGCACGCCACCATGCACGCCGAGAACCTGTGGCCGGGGCGGCTGT  1252
            |||||||||||||||.|||||||||||.||.||.|||||||||||.|||||||||||||||||.||.|.|||.|
Sbjct 1179  GCTCAACTATGAAGACCACTGCTTCAGTGGCCATGCCACCATGCATGCCGAGAACCTGTGGCCTGGCCAGCTCT  1252

Query 1253  CCTCCGTCCAGCAGATCCTGCAGCTCTCTGACCTGTGGAGGCTGACCCTCCAGAAGCGTGGCTGCAAGGGGCTG  1326
            ||||.||.|||||||||||||||||..||||||||||||.|.||||||||||||||||.|||||||||||||||
Sbjct 1253  CCTCAGTGCAGCAGATCCTGCAGCTGGCTGACCTGTGGAAGTTGACCCTCCAGAAGCGCGGCTGCAAGGGGCTG  1326

Query 1327  GTGAAGGTGGGTGCCCCAGGCATCCTGCAGGGGATGGTGCTCAGCTTTGGGGGGCTGCAGTTCACAGAGAACCA  1400
            ||||||||.||.||.||.|||||||||||.||.||||||||||||||.||.|||||.|||||||||||.|||||
Sbjct 1327  GTGAAGGTTGGCGCTCCGGGCATCCTGCAAGGCATGGTGCTCAGCTTCGGCGGGCTACAGTTCACAGAAAACCA  1400

Query 1401  CCTCCAGTTCCAGGCCGACCCCGACGTGCTGCACAACAGCTATGCATTGCATGGCATCCGCTACAAGAACGACC  1474
            |||.||||||||||||||||||||.|||||.||||||||||||||..|.||.||||||||||||||||||||||
Sbjct 1401  CCTGCAGTTCCAGGCCGACCCCGAGGTGCTCCACAACAGCTATGCGCTTCACGGCATCCGCTACAAGAACGACC  1474

Query 1475  ATATCAACCTGGCCGTGCTGGCGGATGCCGAGGGCAAGCCCTACCTACACGTGTCCGTGGAGTCCCGTGGCCAG  1548
            |.|||||||||||.|||||||.|||.||.|||||||||||||||||.||.|||||..||||||||||.|||||.
Sbjct 1475  ACATCAACCTGGCTGTGCTGGTGGACGCTGAGGGCAAGCCCTACCTGCATGTGTCTTTGGAGTCCCGAGGCCAA  1548

Query 1549  CCTGTCAAGATCTATGCCTGCAAGGCAGGCTGCCTGGACGAGCCAGTGGAGCTGACCTCGGCGCCCACGGGCCA  1622
            ||.|||||||||||.|||||..|||||||||||||..|.||.||.||.|||||||||||.|.|||....|||||
Sbjct 1549  CCCGTCAAGATCTACGCCTGTGAGGCAGGCTGCCTCCATGACCCCGTAGAGCTGACCTCAGAGCCTGGAGGCCA  1622

Query 1623  CACCTTCTCGGTCATGGTGACACAGCCCATCACGCCACTGCTCTACATCTCCACCGACCTCACACACCTGCAGG  1696
            |||||||||.|||||||||||.|||||||||||.||||||.|.|||||||||||||||||||||||.|||||||
Sbjct 1623  CACCTTCTCTGTCATGGTGACCCAGCCCATCACACCACTGTTGTACATCTCCACCGACCTCACACATCTGCAGG  1696

Query 1697  ACCTGCGGCACACGCTGCACCTCAAGGCCATCCTGGCCCATGATGAGCACATGGCCCAGCAGGACCCCGGGCTG  1770
            ||||||||||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||.|||||.|||
Sbjct 1697  ACCTGCGGCACACGCTGCACCTTAAGGCCATCCTGGCCCACGATGAGCACATGGCCCAGCAGGATCCCGGCCTG  1770

Query 1771  CCCTTCCTCTTCTGGTTCAGCGTGGCCTCCCTAATCACCCTCTTCCACCTCTTCCTCTTCAAGCTCATCTACAA  1844
            ||||||||||||||||||||.|||||||||||.||||||||||||||||||||||||||.||.||||||||.||
Sbjct 1771  CCCTTCCTCTTCTGGTTCAGTGTGGCCTCCCTCATCACCCTCTTCCACCTCTTCCTCTTTAAACTCATCTATAA  1844

Query 1845  CGAGTACTGTGGGCCTGGAGCCAAGCCCCTCTTCAGGAGTAAGGAAGATCCCAG--TGTC--------------  1902
            .||||||||||||||||||||||||||||||||||||||.||||      ||||  |.||              
Sbjct 1845  TGAGTACTGTGGGCCTGGAGCCAAGCCCCTCTTCAGGAGCAAGG------CCAGGCTTTCAGGGAAAGCAGTCC  1912

Query 1903  --------------------------------------------------------------------------  1902
                                                                                      
Sbjct 1913  TTGGCCCTCAGGAGCAGGCAGCAGACGGAGGCAGGTCTGAGTTCCTCACGATGGAGGAACCAGTGGAGACTTGG  1986

Query 1903  --------------------------------------------------------------------------  1902
                                                                                      
Sbjct 1987  GTCGGAAAGCAGTGTGGAGAAGGTCTTCCAAGTAGCCAGCTTTTGGCCAGCTATCTAGAAAAGGAAGATCCCAG  2060

Query 1903  ----  1902
                
Sbjct 2061  TGTC  2064

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