Nucleotide Global Alignment
Description
- Query:
- TRCN0000479353
- Subject:
- XM_011536923.1
- Aligned Length:
- 3396
- Identities:
- 2231
- Gaps:
- 1164
Alignment
Query 1 ATGATTGCAACACCTTTGAAACATTCAAGAATTTACTTACCTCCAGAGGCATCTTCTCAAAGGAGAAATCTACC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CATGGATGCAATCTTTTTTGACAGCATTCCTTCAGGCACACTTACTCCTGTAAAAGATTTGGTGAAATATCAGA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ACTCCTCCTTAAAATTGAATGACCATAAAAAGAATCAGTTCCTAAAAATGACAACTTTTAACAATAAAAATATA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TTTCAATCAACTATGCTAACAGAGGCTACTACCTCTAACAGTTTTCTTGATATCAGTGCTATAAAGCCCAACAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GGATGGATTAAAAAATAAAGCAAACTATGAATCACCAGGAAAAATATTTCTAAGAATGAAAGAAAAAGTACTGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GTGACAAGCAAGAACAGCCATCAAGAAACAGTAGTTTGTTGGAACCACAGAAAAGTGGAAATAATGAAACCTTC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 ACTCCTAACAGAGTTGAAAAAAAAAAATTGCAGCATACCTACCTATGTGAAGAAAAGGAAAACAACAAATCATT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CCAGTCAGATGACAGTTCACTAAGAGCCTCAGTCCAAGGAGTTCCTCTAGAATCATCAAATAATGATATTTTCC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 TCCCGGTCAAACAAAAGATTCAGTGCCAGCAGGAAAAGAAAGCACCACTGCACAATTTAACTTACGAACTTCCA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 ACTCTGAACCAAGAACAGGAAAATTTTTTGGCTGTAGAAGCCCGAAACAAGACATTAACTAGAGCTCAGTTGGC 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 TAAACAAATTTTTCACTCAAAGGAGAGTATAGTTGCAACCACTAAATCCAAAAAGGACACGTTTGTTTTAGAAA 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 GCGTTGATTCTGCTGATGAACAATTTCAAAATACTAATGCTGAGACTCTCAGTACTAATTGTATTCCTATTAAA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 AATGGCAGCCTGTTAATGGTTTCTGATAGTGAGAGGACAACAGAAGGGACTTCGCAACAGAAAGTTAAGGAAGG 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 AAATGGAAAAACAGTGCCTGGAGAGACAGGTCTTCCAGGTTCCATGAAAGATACATGTAAAATTGTACTTGCAA 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 CACCAAGACTTCATATAACAATACCTCGGAGGTCAAAAAGAAATATTTCAAAGCTTTCTCCTCCAAGAATATTT 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 CAAACTGTTACAAATGGACTTAAAAAAAATCAGGTAGTTCAGCTACAGGAATGGATGATTAAAAGCATCAATAA 1184
||||||||||||||||||||
Sbjct 1 ------------------------------------------------------ATGATTAAAAGCATCAATAA 20
Query 1185 TAATACTGCTATATGTGTAGAAGGAAAATTGATAGACGTCACTAACATATATTGGCACAGTAATGTAATTATAG 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21 TAATACTGCTATATGTGTAGAAGGAAAATTGATAGACGTCACTAACATATATTGGCACAGTAATGTAATTATAG 94
Query 1259 AGCGGATTGAGCACAACAAACTTAGGACTATATCAGGCAACGTTTATATATTAAAAGGCATGATAGACCAAATT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 95 AGCGGATTGAGCACAACAAACTTAGGACTATATCAGGCAACGTTTATATATTAAAAGGCATGATAGACCAAATT 168
Query 1333 TCCATGAAAGAAGCAGGATATCCAAATTATCTCATAAGGAAATTTATGTTTGGATTTCCAGAAAATTGGAAAGA 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 169 TCCATGAAAGAAGCAGGATATCCAAATTATCTCATAAGGAAATTTATGTTTGGATTTCCAGAAAATTGGAAAGA 242
Query 1407 GCACATTGATAATTTTCTGGAACAATTAAGGGCTGGTGAAAAGAACAGGGAAAAGACCAAACAAAAACAGAAAA 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 243 GCACATTGATAATTTTCTGGAACAATTAAGGGCTGGTGAAAAGAACAGGGAAAAGACCAAACAAAAACAGAAAA 316
Query 1481 CTGGAAGATCTGTCCGTGACATAAGGAAATCAATGAAAAATGATGCACGAGAAAACCAAACAGATACTGCTCAA 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 317 CTGGAAGATCTGTCCGTGACATAAGGAAATCAATGAAAAATGATGCACGAGAAAACCAAACAGATACTGCTCAA 390
Query 1555 AGAGCCACCACCACTTACGATTTTGATTGTGATAATTTGGAACTGAAGAGTAATAAGCACAGTGAGTCACCAGG 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 391 AGAGCCACCACCACTTACGATTTTGATTGTGATAATTTGGAACTGAAGAGTAATAAGCACAGTGAGTCACCAGG 464
Query 1629 AGCTACAGAATTAAACATGTGCCACAGTAATTGCCAAAATAAACCAACATTAAGGTTCCCAGATGACCAAGTAA 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 465 AGCTACAGAATTAAACATGTGCCACAGTAATTGCCAAAATAAACCAACATTAAGGTTCCCAGATGACCAAGTAA 538
Query 1703 ATAATACTATTCAAAATGGAGGAGGAGATGACTTATCTAATCAGGAATTAATTGGAAAAAAAGAATATAAAATG 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 ATAATACTATTCAAAATGGAGGAGGAGATGACTTATCTAATCAGGAATTAATTGGAAAAAAAGAATATAAAATG 612
Query 1777 TCTTCAAAGAAACTAAAAATTGGTGAAAGAACAAATGAAAGGATAATAAAAAGTCAGAAGCAAGAGACAACTGA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 613 TCTTCAAAGAAACTAAAAATTGGTGAAAGAACAAATGAAAGGATAATAAAAAGTCAGAAGCAAGAGACAACTGA 686
Query 1851 AGAATTGGATGTATCCATTGATATTCTAACCTCAAGGGAACAGTTTTTCTCAGATGAAGAAAGAAAATACATGG 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 687 AGAATTGGATGTATCCATTGATATTCTAACCTCAAGGGAACAGTTTTTCTCAGATGAAGAAAGAAAATACATGG 760
Query 1925 CCATCAATCAGAAGAAAGCTTATATTTTAGTAACACCACTTAAATCTAGAAAAGTGATAGAGCAAAGATGCATG 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 761 CCATCAATCAGAAGAAAGCTTATATTTTAGTAACACCACTTAAATCTAGAAAAGTGATAGAGCAAAGATGCATG 834
Query 1999 AGGTATAATCTGTCCGCTGGCACCATCAAAGCAGTAACAGATTTTGTAATACCAGAGTGTCAAAAAAAAAGTCC 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 835 AGGTATAATCTGTCCGCTGGCACCATCAAAGCAGTAACAGATTTTGTAATACCAGAGTGTCAAAAAAAAAGTCC 908
Query 2073 CATCAGCAAGTCCATGGGGACTTTAGAAAATACATTTGAAGGTCATAAAAGTAAAAACAAGGAAGATTGCGATG 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 909 CATCAGCAAGTCCATGGGGACTTTAGAAAATACATTTGAAGGTCATAAAAGTAAAAACAAGGAAGATTGCGATG 982
Query 2147 AACGTGACTTACTTACTGTCAACCGGAAAATAAAAATATCTAACCTTGAAAAGGAACAAATGCTCACCTCTGAC 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 983 AACGTGACTTACTTACTGTCAACCGGAAAATAAAAATATCTAACCTTGAAAAGGAACAAATGCTCACCTCTGAC 1056
Query 2221 TTTAAGAAAAATACCAGACTATTACCAAAATTGAAGAAAATAGAAAATCAGGTAGCTATGTCATTTTATAAGCA 2294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1057 TTTAAGAAAAATACCAGACTATTACCAAAATTGAAGAAAATAGAAAATCAGGTAGCTATGTCATTTTATAAGCA 1130
Query 2295 TCAGTCCTCACCAGATTTGTCAAGTGAAGAAAGTGAAACAGAAAAGGAAATTAAAAGGAAAGCTGAAGTTAAGA 2368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1131 TCAGTCCTCACCAGATTTGTCAAGTGAAGAAAGTGAAACAGAAAAGGAAATTAAAAGGAAAGCTGAAGTTAAGA 1204
Query 2369 AAACCAAAGCAGGAAACACCAAAGAAGCAGTGGTTCACCTGAGAAAGAGCACAAGAAACACAAGTAATATTCCA 2442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1205 AAACCAAAGCAGGAAACACCAAAGAAGCAGTGGTTCACCTGAGAAAGAGCACAAGAAACACAAGTAATATTCCA 1278
Query 2443 GTGATTTTGGAACCTGAAACTGAAGAAAGTGAAAATGAATTTTATATCAAACAAAAGAAAGCTAGACCTTCCGT 2516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1279 GTGATTTTGGAACCTGAAACTGAAGAAAGTGAAAATGAATTTTATATCAAACAAAAGAAAGCTAGACCTTCCGT 1352
Query 2517 CAAAGAAACTCTTCAGAAGTCTGGTGTTAGGAAAGAGTTTCCAATTACTGAGGCAGTAGGATCTGATAAGACAA 2590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1353 CAAAGAAACTCTTCAGAAGTCTGGTGTTAGGAAAGAGTTTCCAATTACTGAGGCAGTAGGATCTGATAAGACAA 1426
Query 2591 ATAGGCATCCCTTAGAATGCTTACCTGGTTTAATTCAGGATAAGGAATGGAATGAGAAGGAGTTACAGAAACTT 2664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1427 ATAGGCATCCCTTAGAATGCTTACCTGGTTTAATTCAGGATAAGGAATGGAATGAGAAGGAGTTACAGAAACTT 1500
Query 2665 CATTGTGCTTTTGCATCTCTTCCAAAGCACAAACCTGGTTTCTGGTCAGAGGTAGCTGCGGCTGTAGGTTCTCG 2738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1501 CATTGTGCTTTTGCATCTCTTCCAAAGCACAAACCTGGTTTCTGGTCAGAGGTAGCTGCGGCTGTAGGTTCTCG 1574
Query 2739 ATCTCCTGAAGAATGCCAGAAGAAATACATGGAAAATCCCAGAGGAAAAGGATCCCAGAAACATGTCACTAAGA 2812
||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1575 ATCTCCTGAAGAATGCCAGAGGAAATACATGGAAAATCCCAGAGGAAAAGGATCCCAGAAACATGTCACTAAGA 1648
Query 2813 AGAAGCCAGCCAATTCCAAAGGCCAAAATGGCAAGAGAGGTGATGCTGATCAGAAACAAACTATTAAGATAACT 2886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1649 AGAAGCCAGCCAATTCCAAAGGCCAAAATGGCAAGAGAGGTGATGCTGATCAGAAACAAACTATTAAGATAACT 1722
Query 2887 GCCAAAGTGGGAACTCTTAAAAGGAAGCAACAGATGAGGGAATTTCTGGAACAGTTGCCAAAAGATGACCATGA 2960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1723 GCCAAAGTGGGAACTCTTAAAAGGAAGCAACAGATGAGGGAATTTCTGGAACAGTTGCCAAAAGATGACCATGA 1796
Query 2961 TGATTTTTTCAGTACAACACCTTTACAGCATCAAAGAATACTGTTGCCAAGTTTCCAGGACAGTGAAGATGATG 3034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1797 TGATTTTTTCAGTACAACACCTTTACAGCATCAAAGAATACTGTTGCCAAGTTTCCAGGACAGTGAAGATGATG 1870
Query 3035 ATGATATTCTGCCAAATATGGACAAAAATCCAACAACTCCATCATCAGTTATCTTTCCATTGGTAAAAACTCCT 3108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1871 ATGATATTCTGCCAAATATGGACAAAAATCCAACAACTCCATCATCAGTTATCTTTCCATTGGTAAAAACTCCT 1944
Query 3109 CAATGTCAGCATGTCAGTCCTGGCATGCTAGGTTCTATAAATAGGAATGACTGTGATAAATATGTTTTTCGTAT 3182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1945 CAATGTCAGCATGTCAGTCCTGGCATGCTAGGTTCTATAAATAGGAATGACTGTGATAAATATGTTTTTCGTAT 2018
Query 3183 GCAAAAATATCATAAAAGTAATGGTGGTATTGTCTGGGGCAACATCAAGAAAAAATTAGTTGAAACTGATTTCT 3256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2019 GCAAAAATATCATAAAAGTAATGGTGGTATTGTCTGGGGCAACATCAAGAAAAAATTAGTTGAAACTGATTTCT 2092
Query 3257 CAACTCCAACACCAAGAAGGAAAACCCCATTTAACACAGACTTAGGAGAAAACTCTGGTATTGGAAAACTTTTC 3330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2093 CAACTCCAACACCAAGAAGGAAAACCCCATTTAACACAGACTTAGGAGAAAACTCTGGTATTGGAAAACTTTTC 2166
Query 3331 ACTAATGCTGTGGAATCTTTAGATGAAGAAGAGAAAGATTATTATTTTTCGAACTCTGATTCTGCA 3396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2167 ACTAATGCTGTGGAATCTTTAGATGAAGAAGAGAAAGATTATTATTTTTCGAACTCTGATTCTGCA 2232
