Nucleotide Global Alignment

Description

Query:
TRCN0000479398
Subject:
NM_001331219.1
Aligned Length:
3212
Identities:
2187
Gaps:
691

Alignment

Query    1  ATGTTCACCCTGTCTCAGACCTCGAGAGCATGGTTCATCGATAGAGCCCGTCAGGCACGAGAAGAAAGGCTTGT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GCAGAAGGAACGGGAGCGGGCAGCTGTTGTGATCCAGGCCCATGTCCGGAGTTTTCTCTGTCGGAGTCGACTGC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AGAGAGATATCAGGAGAGAGATTGATGACTTTTTTAAAGCAGATGACCCTGAGTCCACTAAAAGAAGTGCACTT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TGTATTTTCAAGATTGCCAGGAAACTGCTGTTCCTATTCAGAATCAAAGAGGATAATGAGAGATTTGAGAAGTT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GTGTCGCAGCATCCTGAGCAGCATGGATGCTGAGAATGAGCCTAAGGTGTGGTATGTGTCCCTGGCTTGTTCTA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AGGACCTCACCCTCCTTTGGATTCAACAGATCAAGAACATTTTGTGGTACTGCTGTGATTTTCTCAAGCAGCTC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  AAGCCTGAAATCCTGCAGGACTCCCGACTCATCACCCTGTACCTCACGATGCTTGTCACCTTCACAGACACTTC  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  AACGTGGAAAATTCTTCGGGGAAAAGGTGAAAGTCTTCGACCAGCGATGAACCACATTTGTGCAAATATAATGG  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  GACATCTCAACCAGCATGGATTTTATTCTGTGCTGCAGATATTGTTAACCCGTGGCCTGGCAAGACCCCGTCCT  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  TGTCTATCCAAAGGCACTTTAACAGCAGCTTTTTCTCTAGCGTTACGCCCTGTGATTGCTGCACAGTTCTCAGA  740
                           |..|||||||||||.||.|||||.||..|.|||||||||.|||||||.|||||||||||
Sbjct    1  ---------------ATGTTAACAGCAGCCTTCTCTCTGGCCCTGCGCCCTGTGGTTGCTGCGCAGTTCTCAGA  59

Query  741  CAATCTGATTCGGCCGTTCCTCATCCACATCATGTCTGTGCCTGCTCTGGTGACTCATCTCAGCACAGTGACCC  814
            ||||||.||.||.||.|||.||||||||.|||||||.||.||||||||.|||.|||||||||||||.|||.|||
Sbjct   60  CAATCTTATGCGACCATTCATCATCCACGTCATGTCGGTACCTGCTCTCGTGGCTCATCTCAGCACCGTGGCCC  133

Query  815  CTGAGCGCCTCACTGTTTTAGAATCCCATGACATGCTTCGTAAATTCATCATATTTTTAAGAGACCAAGATCGA  888
            |||||||||||...||||||||.|||||||||||||||||||||||||||.|.||..|.|||||...|||.|||
Sbjct  134  CTGAGCGCCTCGGCGTTTTAGAGTCCCATGACATGCTTCGTAAATTCATCGTCTTCCTGAGAGATAGAGACCGA  207

Query  889  TGCCGTGATGTATGTGAAAGTTTAGAAGGATGCCATACGCTTTGTCTAATGGGCAACCTCCTACACTTGGGCTC  962
            |||||.||||..|||||.|||||||||||.||||||||.||.|||||.||||||||.|||||.|||||||||||
Sbjct  208  TGCCGCGATGCTTGTGAGAGTTTAGAAGGCTGCCATACCCTGTGTCTCATGGGCAATCTCCTGCACTTGGGCTC  281

Query  963  CCTCAGCCCCAGAGTGTTAGAGGAGGAGACAGATGGGTTCGTGAGTTTGCTCACCCAGACGCTGTGCTACTGTC  1036
            ||||||||.|||..||||||||||.||||..||||||||.|||||...||||||.||||.||||||||||||||
Sbjct  282  CCTCAGCCTCAGGCTGTTAGAGGAAGAGATGGATGGGTTTGTGAGCGCGCTCACGCAGATGCTGTGCTACTGTC  355

Query 1037  AGAAGTATGTGTCTCAGAAGAAGTCCAACCTGACCCACTGGCATCCTGTCCTTGGCTGGTTCTCCCAATCTGTG  1110
            |||||||.|||.|||||||||||||||||||||||||||||||.|||||.||.||||||||.||||||.|||||
Sbjct  356  AGAAGTACGTGGCTCAGAAGAAGTCCAACCTGACCCACTGGCACCCTGTGCTCGGCTGGTTTTCCCAACCTGTG  429

Query 1111  GATTATGGCCTTAACGAGTCAATGCACTTGATCACCAAACAGCTGCAGTTCTTGTGGGGGGTGCCTCTGATCCG  1184
            |||||.|||||.||.||.||.|||.||.||||||||||.||||||||||||.||||||.|||||||||.|||||
Sbjct  430  GATTACGGCCTCAATGATTCCATGTACCTGATCACCAAGCAGCTGCAGTTCCTGTGGGCGGTGCCTCTCATCCG  503

Query 1185  GATCTTCTTCTGTGACATCCTGAGCAAGAAGCTACTGGAG-AGCCAGGAGCCAGCCCACG-------CACAGCC  1250
            .||..|||||.|||||||||||||||.||||||.|||||| |..|| |||||.|||| ||       |.|||||
Sbjct  504  CATTCTCTTCAGTGACATCCTGAGCAGGAAGCTGCTGGAGCATGCA-GAGCCGGCCC-CGGTGCAACCGCAGCC  575

Query 1251  AGCATCCCCTCAGAATGTGCTCCCAGTGAAGAGTCTCCTAAAGCGTGCTTTTCAAAAGTCGGCATCAGTCCGGA  1324
            ..|.||.||.||||..||||||||.||||||||.|||||.||||||||.|||||.||||||||.||.||.||||
Sbjct  576  GTCCTCACCGCAGACGGTGCTCCCCGTGAAGAGCCTCCTCAAGCGTGCGTTTCAGAAGTCGGCTTCGGTTCGGA  649

Query 1325  ATATTCTCAGGCCTGTCGGGGGTAAACGGGTCGACTCTGCAGAAGTCCAGAAGGTTTGCAACATCTGTGTCCTC  1398
            |.||.|||||||||||.|||||....||.||||||||.||.||.||.|.||||||.||||||||.||.||.|||
Sbjct  650  ACATCCTCAGGCCTGTTGGGGGCCGCCGTGTCGACTCCGCTGAGGTGCGGAAGGTCTGCAACATTTGCGTGCTC  723

Query 1399  TACCAGACCTCGCTGACAACTCTCACACAGATTCGGCTGCAGATACTCACAGGTCTCACTTACCTTGATGACCT  1472
            |||||||||||||||||.||.|||||.|||||.||.||||||||.|||||||||||.||.|||||.||||||||
Sbjct  724  TACCAGACCTCGCTGACGACCCTCACCCAGATCCGCCTGCAGATCCTCACAGGTCTTACGTACCTGGATGACCT  797

Query 1473  GCTTCCCAAACTGTGGGCATTTATCTGTGAGCTCGGGCCCCACGGAGGGTTAAAGCTCTTCTTGGAATGCCTGA  1546
            |||.|||||.||.|||||.||||||||||||||.|||||||||||.|||.|.|||||||||.||||.|||||||
Sbjct  798  GCTGCCCAAGCTCTGGGCGTTTATCTGTGAGCTGGGGCCCCACGGCGGGCTCAAGCTCTTCCTGGAGTGCCTGA  871

Query 1547  ACAATGACACTGAAGAGTCCAAGCAACTCTTGGCCATGCTGATGCTGTTCTGTGACTGTTCGCGGCACCTCATC  1620
            ||||||||||||.||||||||||||.|||.||||||||||||||||.||||||||||||||.||||||||||||
Sbjct  872  ACAATGACACTGGAGAGTCCAAGCAGCTCCTGGCCATGCTGATGCTCTTCTGTGACTGTTCCCGGCACCTCATC  945

Query 1621  ACAATCCTTGATGACATTGAAGTTTATGAAGAACAGATTTCATTCAAACTGGAAGAGCTGGTCACTATCTCCTC  1694
            ||.|||||.|||||||||||||||||||||||||||||.||.|||||.|||||||||||||||||.||||||||
Sbjct  946  ACCATCCTCGATGACATTGAAGTTTATGAAGAACAGATCTCCTTCAAGCTGGAAGAGCTGGTCACCATCTCCTC  1019

Query 1695  TTTCCTGAATTCTTTTGTGTTTAAGATGATCTGGGATGGAATTGTAGAGAACGCCAAGGGTGAGACCTTGGAGC  1768
            .|||||.|||||.||.||||||||||||||||||||.||||||||||||||.||||||||||||||||||||||
Sbjct 1020  GTTCCTCAATTCCTTCGTGTTTAAGATGATCTGGGACGGAATTGTAGAGAATGCCAAGGGTGAGACCTTGGAGC  1093

Query 1769  TGTTCCAGTCTGTCCACGGGTGGCTTATGGTGCTGTACGAGCGGGACTGCCGGCGGCGCTTCACCCCCGAGGAC  1842
            ||||||||||.|||||.||.|||||.|||||||||||.|||||.||||||||.||||||||..|.||.||||||
Sbjct 1094  TGTTCCAGTCCGTCCATGGCTGGCTGATGGTGCTGTATGAGCGAGACTGCCGCCGGCGCTTTGCTCCGGAGGAC  1167

Query 1843  CACTGGCTGCGAAAGGATCTCAAACCTAGCGTGCTCTTCCAAGAACTCGACAGGGACAGAAAACGGGCACAGTT  1916
            ||||||||.||.|.|||.|||||.|||.|.|||||||||||.||.|||||||.||||.|||...||||.|||.|
Sbjct 1168  CACTGGCTACGGAGGGACCTCAAGCCTGGTGTGCTCTTCCAGGAGCTCGACAAGGACCGAAGGAGGGCTCAGCT  1241

Query 1917  GATCCTGCAGTACATCCCACATGTCATCCCTCACAAAAACAGAGTTCTACTGTTTCGAACCATGGTTACCAAGG  1990
            |.||||||||.|||||||.||.|||.|.||||||||.|||||||||||.|||||.||.|.||||||||.|||||
Sbjct 1242  GGTCCTGCAGCACATCCCCCACGTCGTGCCTCACAAGAACAGAGTTCTTCTGTTCCGGAACATGGTTATCAAGG  1315

Query 1991  AGAAGGAGAAACTGGGGCTGGTGGAAACCAGCTCTGCCTCCCCGCATGTCACTCACATCACCATCCGCCGGTCC  2064
            ||||.|||||.||||||||.|||||.||||||||||||||.||.||.|||||.||||||||||||||..|||||
Sbjct 1316  AGAAAGAGAAGCTGGGGCTTGTGGAGACCAGCTCTGCCTCTCCTCACGTCACCCACATCACCATCCGAAGGTCC  1389

Query 2065  AGGATGCTGGAGGACGGCTACGAGCAGCTTAGGCAGCTCTCCCAGCACGCCATGAAGGGGGTCATCCGTGTGAA  2138
            .|||||.||||||||||||||||.|||||..|||||||.||||||||.|||||||||||.||.|||||.|||||
Sbjct 1390  CGGATGTTGGAGGACGGCTACGAACAGCTCCGGCAGCTTTCCCAGCATGCCATGAAGGGTGTGATCCGAGTGAA  1463

Query 2139  GTTTGTCAATGACCTCGGGGTGGACGAAGCAGGGATTGATCAAGACGGTGTTTTTAAGGAGTTCTTGGAAGAGA  2212
            |||||||||.|||||||||||||||||.||.||||||||.||.||.|||||.||.||||||||..|||||||||
Sbjct 1464  GTTTGTCAACGACCTCGGGGTGGACGAGGCTGGGATTGACCAGGATGGTGTCTTCAAGGAGTTTCTGGAAGAGA  1537

Query 2213  TCATCAAGAGAGTTTTTGACCCAGCACTCAATCTGTTCAAGACAACCAGTGGGGATGAGAGGCTGTACCCCTCA  2286
            ||||||||||.||.||||||||.||||||||.|||||||||||||||||.|||||||||.||||||||||.|||
Sbjct 1538  TCATCAAGAGGGTGTTTGACCCCGCACTCAACCTGTTCAAGACAACCAGCGGGGATGAGCGGCTGTACCCATCA  1611

Query 2287  CCCACATCCTACATCCATGAGAATTACCTGCAGCTCTTCGAGTTTGTGGGGAAGATGCTGGGGAAGGCTGTGTA  2360
            |||||.||||||||.||.||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||
Sbjct 1612  CCCACGTCCTACATTCACGAGAATTACCTGCAGCTCTTCGAGTTTGTGGGGAAGATGCTGGGAAAGGCAGTGTA  1685

Query 2361  TGAGGGAATTGTGGTGGACGTGCCATTTGCATCCTTCTTCCTGAGCCAACTGCTTGGGCACCACCACAGCGTCT  2434
            ||||||.||.|||||.||.|||||.|||||.|||||||||||||||||..||||.|||||||||||||||||||
Sbjct 1686  TGAGGGGATCGTGGTAGATGTGCCCTTTGCCTCCTTCTTCCTGAGCCAGATGCTCGGGCACCACCACAGCGTCT  1759

Query 2435  TCTATAGCTCGGTGGATGAACTGCCTTCTCTGGACTCCGAGTTCTATAAAAACCTCACCTCCATCAAGCGCTAT  2508
            ||||.|||||.||||||||.||.||.||.||||||||.|||||.|||||||||||||||||||||||||||||.
Sbjct 1760  TCTACAGCTCCGTGGATGAGCTTCCCTCCCTGGACTCGGAGTTTTATAAAAACCTCACCTCCATCAAGCGCTAC  1833

Query 2509  GATGGGGACATCACTGACCTGGGCCTGACGCTGTCTTACGACGAGGACGTCATGGGTCAGCTTGTTTGCCATGA  2582
            |||||.||||||.|.|||||.||.|||||||||||||||||.||.|||||||||||||||||.||.|||||.||
Sbjct 1834  GATGGAGACATCGCAGACCTCGGGCTGACGCTGTCTTACGATGAAGACGTCATGGGTCAGCTCGTCTGCCACGA  1907

Query 2583  ACTGATTCCTGGAGGGAAGACCATTCCTGTTACAAATGAAAATAAAATTAGCTACATCCATCTGATGGCACATT  2656
            ||||.||||.||||||||||||||.||.||||||.||||.||.||||||||||||||||||||||||||.||||
Sbjct 1908  ACTGGTTCCCGGAGGGAAGACCATCCCGGTTACAGATGAGAACAAAATTAGCTACATCCATCTGATGGCGCATT  1981

Query 2657  TTCGAATGCACACTCAAATAAAAAACCAAACAGCTGCCCTCATTAGCGGATTCCGTTCCATTATCAAACCCGAG  2730
            |.|||||||||||||||||.||||||||.||||||||.||.||.||.||.|||||||||||.|||||.||||||
Sbjct 1982  TCCGAATGCACACTCAAATTAAAAACCAGACAGCTGCTCTTATCAGTGGCTTCCGTTCCATCATCAAGCCCGAG  2055

Query 2731  TGGATCCGAATGTTCTCAACTCCTGAACTGCAGCGTCTCATCTCTGGCGACAATGCTGAGATTGATCTGGAAGA  2804
            |||||||||||||||||.||.|||||.||.|||||.||||||||.||.|||||.||||||||.|||||||||||
Sbjct 2056  TGGATCCGAATGTTCTCTACCCCTGAGCTTCAGCGCCTCATCTCCGGGGACAACGCTGAGATAGATCTGGAAGA  2129

Query 2805  TTTAAAGAAGCACACAGTCTACTACGGTGGTTTCCATGGAAGTCACAGAGTCATCATCTGGCTCTGGGATATTC  2878
            .|||||||||||||||||.|||||||||||.||.|||||.||.|||||.|||||||||||||||||||||||.|
Sbjct 2130  CTTAAAGAAGCACACAGTGTACTACGGTGGCTTTCATGGGAGCCACAGGGTCATCATCTGGCTCTGGGATATCC  2203

Query 2879  TGGCCTCCGACTTCACACCGGATGAGAGAGCTATGTTTCTGAAGTTCGTGACCAGCTGCTCCAGACCCCCGCTC  2952
            ||||.|||||||||||.||.||.||.|||||.|||||.||||||||.|||||||||||||||.|.|||||||||
Sbjct 2204  TGGCTTCCGACTTCACGCCTGAAGAAAGAGCCATGTTCCTGAAGTTTGTGACCAGCTGCTCCCGGCCCCCGCTC  2277

Query 2953  CTGGGATTCGCCTACCTCAAGCCTCCATTCTCCATCCGCTGCGTGGAGGTGTCGGACGATCAGGACACCGGGGA  3026
            ||.|||||||||||||||||||||||.||||||||||||||.|||||.||.||.||.||.||||||||.|||||
Sbjct 2278  CTAGGATTCGCCTACCTCAAGCCTCCGTTCTCCATCCGCTGTGTGGAAGTATCAGATGACCAGGACACTGGGGA  2351

Query 3027  CACTCTGGGCAGCGTCCTCCGGGGCTTCTTCACCATCCGCAAGCGGGAGCCAGGCGGCCGCCTGCCCACCTCCT  3100
            .||.|||||||||||||||.|||||||||||||||||||||||.||||||||||.||.||.||||||||.||.|
Sbjct 2352  TACCCTGGGCAGCGTCCTCAGGGGCTTCTTCACCATCCGCAAGAGGGAGCCAGGGGGGCGTCTGCCCACATCTT  2425

Query 3101  CCACCTGCTTCAACCTGCTCAAGCTGCCCAACTACAGCAAGAAGAGCGTCCTCCGCGAGAAGCTGCGCTACGCC  3174
            ||||.||||||||||||||.|||||||||||||||||||||||||||||.||.||.|||||.||.|||||.|||
Sbjct 2426  CCACTTGCTTCAACCTGCTTAAGCTGCCCAACTACAGCAAGAAGAGCGTACTGCGAGAGAAACTACGCTATGCC  2499

Query 3175  ATCAGCATGAACACGGGCTTTGAACTCTCC  3204
            |||||||||||||||||||||||.||||||
Sbjct 2500  ATCAGCATGAACACGGGCTTTGAGCTCTCC  2529

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