Nucleotide Global Alignment
Description
- Query:
- TRCN0000479403
- Subject:
- XR_246519.3
- Aligned Length:
- 6260
- Identities:
- 872
- Gaps:
- 5387
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGTCCTCCCGCGGAGGGGCGTAGGGTGTAAACAGGCGACGCGCTGGGGGAGGTGCGGCCTTGCTGCGTCCACG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTCGGGCATGCTCGAGGCGGGCCAGGGCGGTAGCGCCGCCAGCTCAGAGCCCACCTGAGGTAACTCCTGCGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCTAGGATCGGAGTCCCCCACGCCGCGCGCAGCCGCCGCCGCTGGCCGCCAATAAGGGCGGCCGAGCCCCCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCGGGCAGGGGGTGTGGCTGCCGGCAGCGCGTCGGCTACAGGTGGGCTGGGCTGGGCTGGGCTGGGCTGGGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGTGGGGGCGGCCGCCAAGGACCCATCCCTGCGCTGCGGGCCCGGCGTGGAGCCCGCGGAGAGGCAGCGCGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCAGGCAGTGGGTCTCTCTGCCCCGGTGCTCGCGTCTGCCCCTGGGGCCGGGCCGAGCGGAACCAGGAATCGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGAAACGGTCAGCGCCCAGGGCTCTAGGCCGGCCGCCCCGGGTGCCAGGTGAATTCCTTTCCCTGACCGGCTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGACGTTGGCCCGTCAGCCGTCGTCTTTGGCCTGAGTGTGCACATCTGTAAAATGGAAGCTCGGACTAGTGAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCGTGAGGACCTTCCACGTCTGACGTGTGATCTCGAGAGACCTGCGTACATTCGGGGTGCCAGAAGGAAAGCAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGCTTGAAATCCATGGCCCAAAATGACTCTACCAGTGGAGACTCTCTTCTGTGAAGAAGACGACCAGATAAGAG 740
Query 1 ------ATGAGCATGCCACTGCATCAGATCTCTGCCATTCCATCCCAGGATGCCATCTCTGCTAGAGTCTACAG 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTTGGGATGAGCATGCCACTGCATCAGATCTCTGCCATTCCATCCCAGGATGCCATCTCTGCTAGAGTCTACAG 814
Query 69 AAGTAAGACCAAAGAAAAGGAGAGGGAAGAACAGAATGAGAAGACTTTGGGACATTTCATGAGTCATTCAAGCA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAGTAAGACCAAAGAAAAGGAGAGGGAAGAACAGAATGAGAAGACTTTGGGACATTTCATGAGTCATTCAAGCA 888
Query 143 ACATTTCTAAGGCTGGGAGTCCTCCGTCAGCATCAGCTCCGGCTCCGGTGTCCTCCTTCTCTCGCACTTCTATC 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACATTTCTAAGGCTGGGAGTCCTCCGTCAGCATCAGCTCCGGCTCCGGTGTCCTCCTTCTCTCGCACTTCTATC 962
Query 217 ACGCCATCCAGCCAGGACA------------------------------------------------------- 235
|||||||||||||||||||
Sbjct 963 ACGCCATCCAGCCAGGACATCTGCAGTTCCAGTGCAGTGTTTTCTGAGTGTTGTCACCACAGTTCCGTGCAGTC 1036
Query 236 -------------------------------------------------------------------------- 235
Sbjct 1037 TGCTGTTGTCTCGAAAGCTCCTCACTGCCAGAGTTCTCTGACACAAGGGCTCACTGTGACAGTTATCTGTAAGG 1110
Query 236 -------------------------------------------------------------------------- 235
Sbjct 1111 ACACATTACAGGCGTCAAAGAGAAATTCCTTTGGTTCAGAATGGGCCCAGGCCTTGAAGCCTGCTAAGAATACC 1184
Query 236 -------------------------------------------------------------------------- 235
Sbjct 1185 AAAGCCAGAAGAACACTAAAGTTCTCAAGGTCCCTCAATGATGTGGGTGAGAAGGCGCAGGATACTTCAGAAAG 1258
Query 236 -------------------------------------------------------------------------- 235
Sbjct 1259 TTTTGCCTATGTGGAAAGAACTTGTTCTGAAGGGAAATTAATACTCCCTCAAGATACGTGTCTCAGAACTAACA 1332
Query 236 -------------------------------------------------------------------------- 235
Sbjct 1333 GGTTTCATCATAAAGAAAAAAGAACCCTGAACCACAAACCTCTTGGCAATTCCAAACATTCTTGTGTTTCATGC 1406
Query 236 -------------------------------------------------------------------------- 235
Sbjct 1407 CTTTCTGCCGGTCGCTCAACTGCCTCAGAGGTGGAAGCTGGCAAGGGGGGCAGGCCCGGCCTGCTGCTGGAAGA 1480
Query 236 -------------------------------------------------------------------------- 235
Sbjct 1481 GAAGGCGGATGGTGAGGCCACGTCCCGAAGCCGGCAACTGCTCCAGTACCTGTTCTCACTCTCGCACGGCTTGA 1554
Query 236 -------------------------------------------------------------------------- 235
Sbjct 1555 GCGCCAGCAGCCTGCACAGGTTCCATGAGCTGGAGAGCTGCGCTGCTCGCCTGCACACTGCCAAGTCCTCCAGC 1628
Query 236 -------------------------------------------------------------------------- 235
Sbjct 1629 GGGCTGGCAGGGAGTATGGGCTTCTGCTCTGACGAGATGGGAGACGACGATGTCTTTGAGGACAGCACATCTGC 1702
Query 236 -------------------------------------------------------------------------- 235
Sbjct 1703 AAAACTGAAGAGTAGGGTTCTGCGGGCGCCCCTCTGCTCCACGGAAAAGGACAGCGACCTGGATTGTCCTTCTC 1776
Query 236 ---------------------------------------------------TCTGCAGGATCTGCCACTGTGAA 258
|||||||||||||||||||||||
Sbjct 1777 CCTTCTCTGAAAAATTACCCCCCATATCTCCCGTGTCCACGTCAGGGGATGTCTGCAGGATCTGCCACTGTGAA 1850
Query 259 GGAGATGATGAGAGCCCCCTGATCACCCCCTGCCACTGCACAGGAAGCCTCCACTTCGTGCACCAGGCCTGCCT 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GGAGATGATGAGAGCCCCCTGATCACCCCCTGCCACTGCACAGGAAGCCTCCACTTCGTGCACCAGGCCTGCCT 1924
Query 333 GCAGCAGTGGATCAAGAGCTCCGACACGCGCTGCTGCGAGCTCTGCAAGTATGAGTTCATCATGGAGACCAAGC 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GCAGCAGTGGATCAAGAGCTCCGACACGCGCTGCTGCGAGCTCTGCAAGTATGAGTTCATCATGGAGACCAAGC 1998
Query 407 TGAAGCCACTGAGAAA---------------------------------------------------------- 422
||||||||||||||||
Sbjct 1999 TGAAGCCACTGAGAAAATAAATGAAAAAGAAAGTCTGGCTATTTGGAGTAAATTAATGAGCTCCTAGAGGAGAT 2072
Query 423 -------------------------------------------------------------------------- 422
Sbjct 2073 GGGACTAGCAGAGTCTGCTTGTACCAGGAACTCTTAGCGTCGATTTCGAGCTGTTGCTGCCAAAGTAGCAAGGA 2146
Query 423 ------ATGGGAGAAGTTGCAGATGACGTCCAGCGAGCGCAGGAAGATCATGTGCTCAGTGACATTCCACGTCA 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CCAAAGATGGGAGAAGTTGCAGATGACGTCCAGCGAGCGCAGGAAGATCATGTGCTCAGTGACATTCCACGTCA 2220
Query 491 TTGCCATCACATGTGTGGTCTGGTCCTTGTATGTGCTCATTGACCGTACTGCTGAGGAGATCAAGCAGGGGCAG 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TTGCCATCACATGTGTGGTCTGGTCCTTGTATGTGCTCATTGACCGTACTGCTGAGGAGATCAAGCAGGGGCAG 2294
Query 565 GCAACAGGAATCCTAGAATGGCCCTTTTGGACTAAATTGGTGGTTGTGGCCATCGGCTTCACCGGAGGACTTCT 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GCAACAGGAATCCTAGAATGGCCCTTTTGGACTAAATTGGTGGTTGTGGCCATCGGCTTCACCGGAGGACTTCT 2368
Query 639 TTTTATGTATGTTCAGTGTAAAGTGTATGTGCAATTGTGGAAGAGACTCAAGGCCTATAATAGAGTGATCTATG 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TTTTATGTATGTTCAGTGTAAAGTGTATGTGCAATTGTGGAAGAGACTCAAGGCCTATAATAGAGTGATCTATG 2442
Query 713 TTCAAAACTGTCCAGAAACAAGCAAAAAGAATATTTTTGAAAAATCTCCACTAACAGAGCCCAACTTTGAAAAT 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 TTCAAAACTGTCCAGAAACAAGCAAAAAGAATATTTTTGAAAAATCTCCACTAACAGAGCCCAACTTTGAAAAT 2516
Query 787 AAACATGGACATGGAATCTGTCATTCCGACACAAACTCTTCTTGTTGCACAGAGCCTGAAGACACTGGAGCAGA 860
|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 AAACATGGATATGGAATCTGTCATTCCGACACAAACTCTTCTTGTTGCACAGAGCCTGAAGACACTGGAGCAGA 2590
Query 861 AATCATTCACGTC------------------------------------------------------------- 873
|||||||||||||
Sbjct 2591 AATCATTCACGTCTGATTGTGTGCGGGTTGTCATTTTCCTGGACATCCATGAAGAGCTGAAGGAAATTGTTTAC 2664
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2665 TGCCAATTGTATACCTTTCTTATGTCCTTTAATAGCATAGACTGGACAGGTGACTATTTATAGTGGCTTCTCTT 2738
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2739 TTTCTAAACCCTCCTTAGTCTCCTAGAAAACCTTCCTGTGGGCCAGGCATGCCTGGGTCCTGCCTCTGCCTGGC 2812
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2813 AGCTCTGTGGGAAAGTGGAAGACCCCATGATGACATCATGGGGAGCCAGCAGAGTTCCTGCCCATGGTCTTGAG 2886
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2887 CTGAATGAGAGAATAAAATGCCAATCCCAAGGGAAGAGGAGGAGCAGGGGTGCCCAGGCCCTGATACCCAGCCG 2960
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2961 CCTCCAGCTTGCAGTGGTCCCCAGCCTGGAGCAGAGCATTGGGGAGTGTCTAGCCATGACGAGAAGATTCCCTC 3034
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3035 TGCATCACGGCGAACCCCAGGAGATGGTATTGAAACAGACCCCCAAACACAGACTCCTGCCTGCCCTCTGCCGA 3108
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3109 TGCTGCCTCCTCCATGCTCTTGAGCAGGTGGAGCCATGGTGCTCTGTGGTGGCGCATGATTCACTGAGCAAACA 3182
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3183 GCACTTTACAGAAGAAAATCTTTATTTTGTAATATGTGTGTCCAGCGGGATTGACACTCAAAAAAAGTCTCACT 3256
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3257 TAGAAATCTTCCCTTCCTTACCTTTGTATCTCCTTTACATCATGAGAGATCAAAAATCCATTTTGCCTTACATA 3330
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3331 TGCTAAGAAGCGTGGCATTCTTTCTGTTCATAAAACAGACTCATGACTTTTAAGACAGGACAAGCAGGCCAGAG 3404
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3405 GCTTTTTTTTTAATCACAGATCTCATGGGAATTAGTGGATGCTAAATGGCAATTAAAGCATGATTCCTATGCTT 3478
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3479 TTGAGCCTGTTTTATGACAAGGTGTTACTTTGTAGACCTGGCCCATACATTTCTTTTTTGTCAACACTGAAAAA 3552
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3553 GAACAGTTTCTGAGATCGAAATGGAAGGAAAGGAAGTGAGTAATGACAACAAAACTGAATATTTAAAAAATATT 3626
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3627 CCTTTATAGTTAAATCTCTCCAGTTGGTGTTGGCTTCACATTGAAAGAGCAGCCATGTGCCACCCTGGCCGGGG 3700
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3701 TGTGTGCACTGCATGCAGGTTCTCCCTTGCATGCAAGATGGGTGCTGGCCCACTGTGAGGCTTCTGCTCGGGGA 3774
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3775 AGTTCTGTGGAGTCACTACCAGGGCCAAGAGGCAGGTGGGCTGGCTCTGGGACGAGGGCCAGGTGTGAGCAAAC 3848
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3849 TGCCAGGGTCCGCTGTGCCACTGCTCCCCGGCCACATGCCCGCCCAGCTGTCGCCTTAACCAGACTGAACAGAC 3922
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3923 AGGATCCTTCAGGGCCCTTGGCCCCACTCTCAGTGCATTCTGTCATCAGGGATTACCACCTGTACCATTTTCAT 3996
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3997 AAAACAAAACCAAAATCACTACCATCAAATGGCCTTGTCCCTCTAAAAAGTCTGCTTAAAATTCTGTTTTTAAA 4070
Query 874 -------------------------------------------------------------------------- 873
Sbjct 4071 ACCCAGTTTCCTAGTTTTCCAGGCAAATAGTTACCTCCGGGAAAGTTGCTGGGGGGGCCTGAAGCACAATGTAG 4144
Query 874 -------------------------------------------------------------------------- 873
Sbjct 4145 CGCAGATGCTTCCTTTCCAGGCCATTCTCTCACCCAGCCTGCACGGAGGAGATGGGAGATGCTGGGGGTCCTGC 4218
Query 874 -------------------------------------------------------------------------- 873
Sbjct 4219 CCTCAGTCTTTTTGGGCCTTAGGCGTTTCGTTCATCCTGCTAAGGGGATGAAGCAAACACGAGGTGATTCCTTT 4292
Query 874 -------------------------------------------------------------------------- 873
Sbjct 4293 GCCTTTCAGAGTGGAAGCCCTGGAGTTTGTTTTGAAGGCCAGGAGGCTGAAGGATCTCTAAGCTACGGTGTGGG 4366
Query 874 -------------------------------------------------------------------------- 873
Sbjct 4367 CTTAATAGCAGCAGGCTTTGTCCTCCTGTCTCCTCCAAGCCAGTGTCTGATTCCTTGGCAACACAGGTCTTAGT 4440
Query 874 -------------------------------------------------------------------------- 873
Sbjct 4441 CTGTGGAGTGGCTCTGCTGTGGCCTTCCTCTGGCCGGGCAGGCACTGTCCAGCCATAGCCAGCTCCTGAGAATA 4514
Query 874 -------------------------------------------------------------------------- 873
Sbjct 4515 GGTCAGCCTCTCCTTTCTGTCTCCCAGGGCACATCCAGCCCGTGCCTGTGTTCACTGTGCCCCGAAGTGCAATT 4588
Query 874 -------------------------------------------------------------------------- 873
Sbjct 4589 ACCCATACCCCTTCTCAGCCTGGGGACCCCAGGCAACCACAGACTGTCCACTCAGGGGAGCTGAATCCCAGGTC 4662
Query 874 -------------------------------------------------------------------------- 873
Sbjct 4663 AGCCCTGCCAATGTCCCTTAGGAACTGCCCAGGCAAGGCCCCTGGTTTTGTATACTTGTTCCTGCCACCCAGCA 4736
Query 874 -------------------------------------------------------------------------- 873
Sbjct 4737 GTAGATGAGTGTTTCAGGTGAAGACCAGGATAGATTTTCTAAGTGTGAATCCCCACTTCACATATGGAACCCCT 4810
Query 874 -------------------------------------------------------------------------- 873
Sbjct 4811 TATGCTGAACTTGAAAAGCACCAAGACTTCCTGTAGACAAGAAAGTGCTTAGGTAGGGACAGCCCCTGGGCATC 4884
Query 874 -------------------------------------------------------------------------- 873
Sbjct 4885 CCACCCAATGTAGCTGGCACCCCACTATGGCAAAGGTGCCTTGATAACTGAGCCCTGTATCCCTCCCATGCCCA 4958
Query 874 -------------------------------------------------------------------------- 873
Sbjct 4959 GCCAGATTCTCATGGGAAGCCCTCTCCCTTCTTTTCTGCCTAACACCATCTCATCGTTTCTGGCCTCACTGTGG 5032
Query 874 -------------------------------------------------------------------------- 873
Sbjct 5033 ACAATCCACACACATTCTTCTTTCCTCTCCTGGCGGGGCACAGAGCCACCCCCTTGCCTTTTCTTTTCTTGAAG 5106
Query 874 -------------------------------------------------------------------------- 873
Sbjct 5107 GTTCTAGTTCAGCTCCTGATTCATCAGACCCTTCTAGCCCCCTGCATCTAGCAGTGAAGCATGAAGCCTGGTGG 5180
Query 874 -------------------------------------------------------------------------- 873
Sbjct 5181 GGATGTGGTACTCCCATCTGGTGTGGCCACCAGCTCTGCCAATGTTCCTGTAGCCTTGGAAAACTTGCTCTCTC 5254
Query 874 -------------------------------------------------------------------------- 873
Sbjct 5255 GGTTCTTTTGGGTGCTGTGTACTCCCCAGCTTCCCCCCTTCCCCCCCCATTTTGCACCTGGGTTTAGTGAAAGG 5328
Query 874 -------------------------------------------------------------------------- 873
Sbjct 5329 ATGGCATTTGGTTGACCCATATAGAAACCCAGAATGAGGTCTCAGGGCCAGGAGGCCTGGTATTTGTAGGCCAG 5402
Query 874 -------------------------------------------------------------------------- 873
Sbjct 5403 GGAAGGGGAAGAGGCAAGTGGTCTGGGGTATCACCAGCCAGCCCTCTCTGATTTGGCCTCTACTCCCCATAAGT 5476
Query 874 -------------------------------------------------------------------------- 873
Sbjct 5477 CACAGTACCATAAGCAGGCTTCTGGCCTCAGCAATTTGGTCTTTGTGCCCAAGTTTATTGTGAGAATTTCCTGA 5550
Query 874 -------------------------------------------------------------------------- 873
Sbjct 5551 AAACTCTATAAAAGGTCTCTTCCTACTGTAGGCCTCTAATGTTTCTCCCCTTTTTGCTTCAGTCCACTCTTCAG 5624
Query 874 -------------------------------------------------------------------------- 873
Sbjct 5625 TCTTGTAGGCCTAGTTTTCAAACCTGCACATGTGTCCTACCTGGCCACAGGCATGCAGGCCTCAGGCAGCTGGG 5698
Query 874 -------------------------------------------------------------------------- 873
Sbjct 5699 CCAGTTTGGGAGCCTCGGGTGATGTCTGCACGATCTGGGGCTGCCTCTGCACCCCTGCTGTGGGCTTCAGGGTT 5772
Query 874 -------------------------------------------------------------------------- 873
Sbjct 5773 GGAGAAGGGCTGGGACCAACCGGGTGAGATCCACAAGTCTCTGGATGTGGCTGAAGGCAAATACACAATTGAAG 5846
Query 874 -------------------------------------------------------------------------- 873
Sbjct 5847 TACTTTCTGTTTTGAAGTGCTTTCCCTTTTGAATCTGGTTTGAAACATGCAGCTTCTGTCTCTAGCCCAAGGAA 5920
Query 874 -------------------------------------------------------------------------- 873
Sbjct 5921 AGACCAAAACATAGGGAAATAAAAGCATTTATCTTTGTCTTGGAAGTAATTGTTGAAGTTGTGCAGTTGATCAG 5994
Query 874 -------------------------------------------------------------------------- 873
Sbjct 5995 TGCACAGTTAGATGCAATGTTTATAGAAATTGATTGTTAAACCAAATTTACACTGGCATGTGTGGTGTAGTTTC 6068
Query 874 -------------------------------------------------------------------------- 873
Sbjct 6069 TAAAAGGCACTTCACATTTGAAATTTTTCTTACCTTAGAAAGTTTCTAGTGATCTAAATGTCTAGTTTTGTATT 6142
Query 874 -------------------------------------------------------------------------- 873
Sbjct 6143 CTTTTGTGTGTGTTCACTGTTTCTCAGTATTACCACTTGAATAATTCTCTGTACAGGGGGGTTTGTGCTATACA 6216
Query 874 -------------------------------------------- 873
Sbjct 6217 CTGGGATGTCTAATTGCAGCAATAAAGCCTTTCTTTAAAAAGGA 6260
