Nucleotide Global Alignment
Description
- Query:
- TRCN0000479417
- Subject:
- NM_001282017.1
- Aligned Length:
- 2602
- Identities:
- 993
- Gaps:
- 1481
Alignment
Query 1 ATGGCATCTGAGGTGCCTTATGCCTCTGGCATGCCCATCAAGAAAATAGGCCATAGAAGTGTTGATTCCTCAGG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGGGACAACCTCATCAGCCTTGAAAGGTGCCATCCAGTTAGGCATTACCCACACTGTGGGGAGCCTGAGTACCA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AACCAGAGAGTGATGTCCTCATGCAAGATTTCCACATGGTGGAGAGTATCTTCTTTCCCAGTGAAGGGAGCAAC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CTGACCCCTGCTCATCACTACAATGCCTTTCGTTTCAAGACCTATGCACCTGTTGCCTTCCGCTACTTCTGGGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GCTATTTGGTATCCGGCCCGATGATTACTTGTATTCCCTCTGCAGTGAGCCGCTGATTGAACTCTGTAGCTCTG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GAGCTAGTGGTTCCCTGTTCTATGTGTCCAGCGACGATGAGTTCATTGTTAAGACAGTCCGACATAAAGAAGCG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GAGTTTCTGCAGAAGCTGCTTCCAGGATACTACATAAACCTCAACCAGAACCCTCGGACTTTGCTGCCTAAATT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CTATGGACTGTACTGTGTGCAGACAGGTGGCAAGAACATTCGGATTGTGGTGATGAACAATCTTTTACCAAGAT 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CGGTAAAAATGCATATCAAATATGACCTCAAAGGCTCAACCTACAGGCGGCGGGCTTCCCAGAAAGAGCGAGAG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 AAGCCTCTTCCCACATTTAAAGACCTAGACTTCTTACAAGACATCCCTGATGGTCTTTTTTTGGATGCTGACGT 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GCACAACGCTCTCTGTAAGACCCTGCAGCGTGACTGTTTGGTGCTGCAGAGCTTCAAGATAATGGATTATAGCC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TCTTGATGTCAATCCATAATATAGATCATGCACAACGAGAGCCCTTAAGCAGCGAAACACAATACTCAGTTGAT 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 ACTCGAAGACCAGCCCCCCAAAAGGCTCTGTATTCCACAGCCATGGAATCCATCCAGGGAGAGGCTCGACGGGG 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 TGGCACCATGGAGACCGATGACCATATGGGTGGCATCCCTGCCCGGAATAGTAAAGGGGAAAGGCTTCTGCTTT 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 ATATTGGCATCATTGACATTCTACAGTCTTACAGGTTTGTTAAGAAGTTGGAGCACTCTTGGAAAGCCCTGATA 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 CATGACGGAGACACTGTCTCAGTGCATCGCCCAGGCTTCTATGCTGAATGGTTCCAGCGCTTCATGTGCAACAC 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 GGTATTTAAGAAGATTCCCTTGAAGCCTTCTCCTTCCAAAAAACTTCGGTCTGGCTCATCTTTCTCTCAGCGAG 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 CAGGCTCCAGTGGCAACTCCTGCATTACTTACAAGCCATTGGTCTCTGGGGAACACAAGGCACAAGTGACAACA 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 AAGGCGGAAGTGGAGCCAGGTGTTCACCTTGGTTGTCCTGATGTTTTACCTCAGACTCCACCTTTGGAGGAAAT 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 CAGTGAGGGCTCACCTACTCCTGACCCCAGTTTCTCACCTCTA----GTTGAAGAG-ACTTTGCAAATGCTAAC 1475
| ||||.|||| ||| |||.|
Sbjct 1 ------------------------------------------ATGGTGTTGGAGAGCACT------ATGGT--- 23
Query 1476 TACAAGCGTGGACAACAGTGAGTATATGGGGAATGGAGACTTCTTACCCACCCGGCTGCAGGCCCAGCAGGATG 1549
..|.|||||||||||||||||.|||.||||.|||||||||.|.||||||||||||||||||||||||||||
Sbjct 24 ---TTGTGTGGACAACAGTGAGTACATGCGGAACGGAGACTTCCTTCCCACCCGGCTGCAGGCCCAGCAGGATG 94
Query 1550 CTGTCAACACAGTTTGTCATTCAAAGACCCGCAGCAACCCTGAGAACAACGTGGGCCTTATCACACTGGATAAT 1623
|.|||||||..||.|||||.|||||||||||.||||||||||||||.|||||||||||.||||||||||..|||
Sbjct 95 CCGTCAACATTGTATGTCACTCAAAGACCCGAAGCAACCCTGAGAATAACGTGGGCCTGATCACACTGGCCAAT 168
Query 1624 GACTGTGAAGTGCTGACCACACTCACCCCAGACACTGGCCGTATCCTGTCCAAGCTACATACTGTCCAACCCAA 1697
||||||||.||||||||||||||||||||.|||||||||||||||||.||||||||.||.||||||||||||||
Sbjct 169 GACTGTGAGGTGCTGACCACACTCACCCCGGACACTGGCCGTATCCTCTCCAAGCTCCACACTGTCCAACCCAA 242
Query 1698 GGGCAAGATCACCTTCTGCATGGGCATCCACGTGGCCCATCTGGCTCTGAAGCACCGACAAGGCAACAATCACA 1771
.|||||||||||||||||||..|||||||.|||||||||..||||||||||||||||.||.|||||.|||||||
Sbjct 243 AGGCAAGATCACCTTCTGCACTGGCATCCGCGTGGCCCACTTGGCTCTGAAGCACCGGCAGGGCAAGAATCACA 316
Query 1772 AGATCCGCATCATTGCCTTTGTGGGAAACCCGGTGGAGGACAATGAGAAGAATCTGGTGAAACTGGCTAAATGC 1845
||||.||||||||.||||||||.||.|.|||.|||||||||||.||||||.|||||||||||||.||||||.||
Sbjct 317 AGATGCGCATCATCGCCTTTGTCGGTAGCCCTGTGGAGGACAACGAGAAGGATCTGGTGAAACTAGCTAAACGC 390
Query 1846 CTCAAGAAGGAGAAAGTAAATGTTGACATTATCAATTTTGGGGAAGAGGAGGTGAACACAGAAAAGCTGACAGC 1919
||.|||||.||.|||||.|||||||||||.||.|||||||||||||||||||||||||||||.|||||||||||
Sbjct 391 CTTAAGAAAGAAAAAGTGAATGTTGACATCATTAATTTTGGGGAAGAGGAGGTGAACACAGAGAAGCTGACAGC 464
Query 1920 CTTTGTAAACACGTTGAATGGCAAAGATGGAACCGGTTCTCATCTGGTGACAGTGCCTCCTGGGCCCAGTTTGG 1993
||||||.|||||..||||||||||.||||||||.||.||.|||||.|||||||||||||||||.||.||.||||
Sbjct 465 CTTTGTGAACACACTGAATGGCAAGGATGGAACTGGGTCCCATCTAGTGACAGTGCCTCCTGGACCTAGCTTGG 538
Query 1994 CTGATGCTCTCATCAGTTTTCCGATTTTGGCTGGTGAAGGTGGTGCCATGATGGGTCTTGGTGCCAGTGACTTT 2067
||||||||||||||||||.|||.|||.|||||||||||||.|||||||||.|||||||||||||||||||||||
Sbjct 539 CTGATGCTCTCATCAGTTCTCCTATTCTGGCTGGTGAAGGCGGTGCCATGCTGGGTCTTGGTGCCAGTGACTTT 612
Query 2068 GAATTTGGAGTAGATCCCAGTGCTGATCCTGAGCTGGCCTTGGTCCTTCGTGTATTTATGGAAGAGCAGCGGCA 2141
||.|||||||||||||||||||||||||||||..|||||.|||.||||||.||.|.||||||||||||||||||
Sbjct 613 GAGTTTGGAGTAGATCCCAGTGCTGATCCTGAATTGGCCCTGGCCCTTCGAGTCTCTATGGAAGAGCAGCGGCA 686
Query 2142 GCGGCAGGAGGAGGAGGCCCGGCAGGCAGCTGCAGCTTCTGCTGCTGAGGCCGGGATTGCTACGACTGGGACTG 2215
||||||||||||.|||||.||||.|||.|||||.||.|||||.||||||||.||.||||||||..|||||||||
Sbjct 687 GCGGCAGGAGGAAGAGGCACGGCGGGCCGCTGCGGCCTCTGCAGCTGAGGCTGGAATTGCTACACCTGGGACTG 760
Query 2216 A---------AGACTCAGACGATGCCCTGCTGAAGATGACCATCAGCCAGCAAGAGTTTGGCCACACTGGGCTT 2280
| ||||||.||.||.|||||.||||||||||||||||.||||||.||||||||||...||||||||
Sbjct 761 AAGGTGAAAGAGACTCGGATGACGCCCTACTGAAGATGACCATCAACCAGCAGGAGTTTGGCCGTCCTGGGCTT 834
Query 2281 CCTGACCTAAGCAGTATGACTGAGGAAGAGAAGATTGTTTGTGCCATGCAGATGTCCCTGCAGGGAGCAGAGTT 2354
||.|||||||||||.|||||||||||||||.||||.|..|..||||||||||||||||||||||||.|||||||
Sbjct 835 CCAGACCTAAGCAGCATGACTGAGGAAGAGCAGATCGCCTACGCCATGCAGATGTCCCTGCAGGGAACAGAGTT 908
Query 2355 TGGCCTGGCAGAATCAGCAGACATTGATGCCAGCTCAGCCATGGACACATCTGAGCCAGCCAAGGAGGAGGATG 2428
|.||| .||||||.||.|||||.|||||||||||||||||||||||||||||.||||.||||||||||||||
Sbjct 909 TAGCC---AAGAATCGGCTGACATGGATGCCAGCTCAGCCATGGACACATCTGATCCAGTCAAGGAGGAGGATG 979
Query 2429 ATTACGACGTGATGCAAGACCCTGAGTTCCTTCAGAGTGTCCTAGAGAACCTCCCAGGTGTGGATCCCAACAAT 2502
|.||.|||||.|||||.|||||.||||||||||||||.||||||||||||||.|||||||||||||||||||||
Sbjct 980 ACTATGACGTCATGCAGGACCCGGAGTTCCTTCAGAGCGTCCTAGAGAACCTTCCAGGTGTGGATCCCAACAAT 1053
Query 2503 GAAGCCATTCGAAATG--CTGTGGGCTCCCTGGCCTCCCAGGCCACCAAGGACAGCAAGAAGGACAAGAAGGAG 2574
|.|||||||||||.|| .||.||||| |||||||||||||||||||||||..|||||||.||||||||.|||
Sbjct 1054 GCAGCCATTCGAAGTGTCATGGGGGCT--CTGGCCTCCCAGGCCACCAAGGATGGCAAGAATGACAAGAAAGAG 1125
Query 2575 GAAGACGAGAAG 2586
|||||..|||||
Sbjct 1126 GAAGAGAAGAAG 1137
