Nucleotide Global Alignment
Description
- Query:
- TRCN0000479417
- Subject:
- NM_008847.3
- Aligned Length:
- 2707
- Identities:
- 1305
- Gaps:
- 1190
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGTCCGCCTCCTCAGGGCCAGCGGCGGCCGGGTTTTCATCCCTTGATGCCGGGGCCCCTGCTGGTACCGC 74
Query 1 -------------------------ATGGCATCTGAGGTGCCTTATGCCTCTGGCATGCCCATCAAGAAAATAG 49
|..|.||||||||..||||..|||||||.||||||..|.||.|||||||
Sbjct 75 AGCAGCATCTGGAATCAAGAGAGCCACAGTATCTGAGGGACCTTCCGCCTCTGTCATGCCTGTTAAAAAAATAG 148
Query 50 GCCATAGAAGTGTTGATTCCTCAGGAG---------------GGACAACCTCATCAGCCTTGAAAGGTGCCATC 108
|||||.||||||||||||||||.|||| .||||||.||||||||||||||||||||||||
Sbjct 149 GCCATCGAAGTGTTGATTCCTCTGGAGAGACTACATACAAGAAGACAACTTCATCAGCCTTGAAAGGTGCCATC 222
Query 109 CAGTTAGGCATTACCCACACTGTGGGGAGCCTGAGTACCAAACCAGAGAGTGATGTCCTCATGCAAGATTTCCA 182
|||||||||||.||.|||||||||||.||||||||.||||||||||||.|||||||||||||||||||.|||.|
Sbjct 223 CAGTTAGGCATCACTCACACTGTGGGCAGCCTGAGCACCAAACCAGAGCGTGATGTCCTCATGCAAGACTTCTA 296
Query 183 CATGGTGGAGAGTATCTTCTTTCCCAGTGAAGGGAGCAACCTGACCCCTGCTCATCACTACAATGCCTTTCGTT 256
|.||||||||||.|||||.||.|||||||||||.|||||||||||.||.|||||.||.|||||||.||||||.|
Sbjct 297 CGTGGTGGAGAGCATCTTTTTCCCCAGTGAAGGCAGCAACCTGACACCGGCTCACCATTACAATGACTTTCGAT 370
Query 257 TCAAGACCTATGCACCTGTTGCCTTCCGCTACTTCTGGGAGCTATTTGGTATCCGGCCCGATGATTACTTGTAT 330
|||||||||||||.||||||||||||||.||||||.|.|||||.|||||.||||||||.||||||||||||||.
Sbjct 371 TCAAGACCTATGCGCCTGTTGCCTTCCGTTACTTCAGAGAGCTCTTTGGCATCCGGCCTGATGATTACTTGTAC 444
Query 331 TCCCTCTGCAGTGAGCCGCTGATTGAACTCTGTAGCTCTGGAGCTAGTGGTTCCCTGTTCTATGTGTCCAGCGA 404
|||||.|||||||||||..||||||||||||..|..||||||||||||||||||||.||||||||||||||.||
Sbjct 445 TCCCTTTGCAGTGAGCCATTGATTGAACTCTCCAATTCTGGAGCTAGTGGTTCCCTCTTCTATGTGTCCAGTGA 518
Query 405 CGATGAGTTCATTGTTAAGACAGTCCGACATAAAGAAGCGGAGTTTCTGCAGAAGCTGCTTCCAGGATACTACA 478
.|||||.|||||..|||||||.||||..|||||||||||.||.||||||||||||.||||||||||||||||||
Sbjct 519 TGATGAATTCATCATTAAGACCGTCCAGCATAAAGAAGCAGAATTTCTGCAGAAGTTGCTTCCAGGATACTACA 592
Query 479 TAAACCTCAACCAGAACCCTCGGACTTTGCTGCCTAAATTCTATGGACTGTACTGTGTGCAGACAGGTGGCAAG 552
|.||.||.|||||.||||||||.|||||||||||.|||||.||||||.|||||||||||||..||||.||||||
Sbjct 593 TGAATCTTAACCAAAACCCTCGTACTTTGCTGCCCAAATTTTATGGATTGTACTGTGTGCAAGCAGGCGGCAAG 666
Query 553 AACATTCGGATTGTGGTGATGAACAATCTTTTACCAAGATCGGTAAAAATGCATATCAAATATGACCTCAAAGG 626
|||||.||.||||||||||||||||||||.||.||..|.||.||.|||||||||||.|||||||||||.||.||
Sbjct 667 AACATACGAATTGTGGTGATGAACAATCTCTTGCCTCGGTCAGTCAAAATGCATATGAAATATGACCTGAAGGG 740
Query 627 CTCAACCTACAGGCGGCGGGCTTCCCAGAAAGAGCGAGAGAAGCCTCTTCCCACATTTAAAGACCTAGACTTCT 700
.|||||.||||.||||||||||||.||||||||.||||||||..||||.|||||.|||||||||||.||||||.
Sbjct 741 TTCAACTTACAAGCGGCGGGCTTCTCAGAAAGAACGAGAGAAAACTCTCCCCACCTTTAAAGACCTGGACTTCC 814
Query 701 TACAAGACATCCCTGATGGTCTTTTTTTGGATGCTGACGTGCACAACGCTCTCTGTAAGACCCTGCAGCGTGAC 774
|||||||.||||||||.||.||.|||||||||||||||.||.|||..|||||.||||||||.||.|||||||||
Sbjct 815 TACAAGATATCCCTGACGGCCTATTTTTGGATGCTGACATGTACAGTGCTCTGTGTAAGACTCTACAGCGTGAC 888
Query 775 TGTTTGGTGCTGCAGAGCTTCAAGATAATGGATTATAGCCTCTTGATGTCAATCCATAATATAGATCATGCACA 848
||||||||||||||||||||||||||||||||.||.|||||.||||||||.|||||.||.||.||.||||||||
Sbjct 889 TGTTTGGTGCTGCAGAGCTTCAAGATAATGGACTACAGCCTGTTGATGTCCATCCACAACATGGACCATGCACA 962
Query 849 ACGAGAGCCCTTAAGCAGCGAAACACAATACTCAGTTGATACTCGAAGACCAGCCCCCCAAAAGGCTCTGTATT 922
..|.||||||...||||..||.|||||.|||||.|.|||.||.||.|||||||||||.||.|||||.||.||||
Sbjct 963 GAGGGAGCCCACGAGCAATGACACACAGTACTCGGCTGACACGCGCAGACCAGCCCCACAGAAGGCGCTCTATT 1036
Query 923 CCACAGCCATGGAATCCATCCAGGGAGAGGCTCGACGGGGTGGCACCATGGAGACCGATGACCATATGGGTGGC 996
|||||||.|||||||||||||||||.||||||||||||||.|||||..|||||||.||.|||||.|||||||||
Sbjct 1037 CCACAGCTATGGAATCCATCCAGGGCGAGGCTCGACGGGGCGGCACTGTGGAGACTGAGGACCACATGGGTGGC 1110
Query 997 ATCCCTGCCCGGAATAGTAAAGGGGAAAGGCTTCTGCTTTATATTGGCATCATTGACATTCTACAGTCTTACAG 1070
||||||||||||||||..|||||.||||||||.|||||||||||||||||||||||.|||||.|||||.|||||
Sbjct 1111 ATCCCTGCCCGGAATAACAAAGGAGAAAGGCTCCTGCTTTATATTGGCATCATTGATATTCTTCAGTCCTACAG 1184
Query 1071 GTTTGTTAAGAAGTTGGAGCACTCTTGGAAAGCCCTGATACATGACGGAGACACTGTCTCAGTGCATCGCCCAG 1144
|||||||||||||||||||||||||||||||||.|||.|.|||||.||.||.||.||.|||||||||||.||||
Sbjct 1185 GTTTGTTAAGAAGTTGGAGCACTCTTGGAAAGCACTGGTCCATGATGGGGATACGGTGTCAGTGCATCGTCCAG 1258
Query 1145 GCTTCTATGCTGAATGGTTCCAGCGCTTCATGTGCAACACGGTATTTAAGAAGATTCCCTTGAAGCCTTCTCCT 1218
|||||||||||||..||||||||||.||||||||||||||.||.||.|||||||||||||||||||||||||||
Sbjct 1259 GCTTCTATGCTGAGCGGTTCCAGCGTTTCATGTGCAACACAGTGTTCAAGAAGATTCCCTTGAAGCCTTCTCCT 1332
Query 1219 TCCAAAAAACTTCGGTCTGGCTCATCTTTCTCTCAGCGAGCAGGCTCCAGTGGCAACTCCTGCATTACTTACAA 1292
.|||||||..|||||||||||.|.||||||||||.||||.|||||.||||.|||||||||||| ||.|.|.|
Sbjct 1333 ACCAAAAAGTTTCGGTCTGGCCCGTCTTTCTCTCGGCGATCAGGCCCCAGCGGCAACTCCTGC---ACCTCCCA 1403
Query 1293 GCCATTGGTCTCTGGGGAACACAAGGCACAAGTGACAACAAAGGCGGAAGTGGAGCCAGGTGTTCACCTTGGTT 1366
||...|||.||||||||||||||..|||||||||||.||.|||||||||||||||||||.|||.||||||||..
Sbjct 1404 GCTGATGGCCTCTGGGGAACACAGAGCACAAGTGACCACCAAGGCGGAAGTGGAGCCAGATGTACACCTTGGGC 1477
Query 1367 GTCCTGATGTTTTACCTCAGACTCCACCTTTGGAGGAAATCAGTGAGGGCTCACCTACTCCTGACCCCAGTTTC 1440
||||||||||.|||||||||||||||||||||||||||||.||||||||.||||||..|||||.||||||||||
Sbjct 1478 GTCCTGATGTCTTACCTCAGACTCCACCTTTGGAGGAAATAAGTGAGGGTTCACCTGTTCCTGGCCCCAGTTTC 1551
Query 1441 TCACCTCTAGTTGAAGAGACTTTGCAAATGCTA------ACTACAAGCGTGGACAACAGTGA-GTATATGGGGA 1507
||||||.||||||.|.|..||||||||||.||| |.|.|||.|.||||.||...||| || ||..||
Sbjct 1552 TCACCTGTAGTTGGACAACCTTTGCAAATACTAAATTTGAGTTCAACCTTGGAAAAGCTTGATGT---TGCAGA 1622
Query 1508 ATGGAGACTTCTTACCCACCCGGCTGCAGGCCCAGCAGGATGCTGTCAACACAGTTTGTCATTCAAAGACCCGC 1581
.| .|||.||| ||||||
Sbjct 1623 GT-CAGAGTTC--ACCCAC------------------------------------------------------- 1638
Query 1582 AGCAACCCTGAGAACAACGTGGGCCTTATCACACTGGATAATGACTGTGAAGTGCTGACCACACTCACCCCAGA 1655
Sbjct 1639 -------------------------------------------------------------------------- 1638
Query 1656 CACTGGCCGTATCCTGTCCAAGCTACATACTGTCCAACCCAAGGGCAAGATCACCTTCTGCATGGGCATCCACG 1729
Sbjct 1639 -------------------------------------------------------------------------- 1638
Query 1730 TGGCCCATCTGGCTCTGAAGCACCGACAAGGCAACAATCACAAGATCCGCATCATTGCCTTTGTGGGAAACCCG 1803
Sbjct 1639 -------------------------------------------------------------------------- 1638
Query 1804 GTGGAGGACAATGAGAAGAATCTGGTGAAACTGGCTAAATGCCTCAAGAAGGAGAAAGTAAATGTTGACATTAT 1877
Sbjct 1639 -------------------------------------------------------------------------- 1638
Query 1878 CAATTTTGGGGAAGAGGAGGTGAACACAGAAAAGCTGACAGCCTTTGTAAACACGTTGAATGGCAAAGATGGAA 1951
Sbjct 1639 -------------------------------------------------------------------------- 1638
Query 1952 CCGGTTCTCATCTGGTGACAGTGCCTCCTGGGCCCAGTTTGGCTGATGCTCTCATCAGTTTTCCGATTTTGGCT 2025
Sbjct 1639 -------------------------------------------------------------------------- 1638
Query 2026 GGTGAAGGTGGTGCCATGATGGGTCTTGGTGCCAGTGACTTTGAATTTGGAGTAGATCCCAGTGCTGATCCTGA 2099
Sbjct 1639 -------------------------------------------------------------------------- 1638
Query 2100 GCTGGCCTTGGTCCTTCGTGTATTTATGGAAGAGCAGCGGCAGCGGCAGGAGGAGGAGGCCCGGCAGGCAGCTG 2173
Sbjct 1639 -------------------------------------------------------------------------- 1638
Query 2174 CAGCTTCTGCTGCTGAGGCCGGGATTGCTACGACTGGGACTGAAGACTCAGACGATGCCCTGCTGAAGATGACC 2247
Sbjct 1639 -------------------------------------------------------------------------- 1638
Query 2248 ATCAGCCAGCAAGAGTTTGGCCACACTGGGCTTCCTGACCTAAGCAGTATGACTGAGGAAGAGAAGATTGTTTG 2321
Sbjct 1639 -------------------------------------------------------------------------- 1638
Query 2322 TGCCATGCAGATGTCCCTGCAGGGAGCAGAGTTTGGCCTGGCAGAATCAGCAGACATTGATGCCAGCTCAGCCA 2395
Sbjct 1639 -------------------------------------------------------------------------- 1638
Query 2396 TGGACACATCTGAGCCAGCCAAGGAGGAGGATGATTACGACGTGATGCAAGACCCTGAGTTCCTTCAGAGTGTC 2469
Sbjct 1639 -------------------------------------------------------------------------- 1638
Query 2470 CTAGAGAACCTCCCAGGTGTGGATCCCAACAATGAAGCCATTCGAAATGCTGTGGGCTCCCTGGCCTCCCAGGC 2543
Sbjct 1639 -------------------------------------------------------------------------- 1638
Query 2544 CACCAAGGACAGCAAGAAGGACAAGAAGGAGGAAGACGAGAAG 2586
Sbjct 1639 ------------------------------------------- 1638
