Nucleotide Global Alignment

Description

Query:
TRCN0000479463
Subject:
NR_104483.1
Aligned Length:
3891
Identities:
1148
Gaps:
2579

Alignment

Query    1  --------------ATGTCC-CT------CGGTCA----------------GTCGGC-----CT----GTCTGT  28
                          ||.||| ||      |.|.||                |.||||     ||    |||.||
Sbjct    1  AGAGGCTCCAGCCAATCTCCGCTGTGCAGCAGGCAGGGCCGGAGGCAGCTGGACGGCAGGAGCTGGTCGTCAGT  74

Query   29  -----TCCT-------------CTCTAT-AGCTCGGTCAAGGAGTGTGATGACTGGCGAGCAGATGGCTGCCTT  83
                 ||||             |.||.| |||||||||.||||||||||||||.||.|||||||||||.|||||
Sbjct   75  TGGGCTCCTTTCAGGAGCAGGACCCTGTGAGCTCGGTCGAGGAGTGTGATGACCGGGGAGCAGATGGCGGCCTT  148

Query   84  CCATCCATCGTCCACCCCCAACCCGCTGGAGAGGCCCATCAAGATGGGCTGGCTGAAGAAGCAGAGGTCCATCG  157
            .||.|||.|..||||.||||||||.|||||.|||||.||.|||.||||||||||||||||||||||||||||||
Sbjct  149  TCACCCACCCACCACTCCCAACCCCCTGGAAAGGCCAATTAAGGTGGGCTGGCTGAAGAAGCAGAGGTCCATCG  222

Query  158  TGAAGAACTGGCAGCAGAGGTACTTTGTGCTGAGGGCGCAGCAGCTCTACTACTACAAGGATGAAGAGGACACG  231
            ||||.||||||||||||.|||||||||||.||||.||.|||||.|||||||||||||||||.|||||||||.|.
Sbjct  223  TGAAAAACTGGCAGCAGCGGTACTTTGTGTTGAGAGCTCAGCAACTCTACTACTACAAGGACGAAGAGGACTCA  296

Query  232  AAGCCCCAGGGCTGCATGTATCTACCAGGATGTACAATCAAGGAGATCGCCACAAACCCAGAAGAAGCTGGGAA  305
            |||||.|||||||||||||||||.|||||..|||||.||||.||.||.|||||||||||.||||||||||||||
Sbjct  297  AAGCCACAGGGCTGCATGTATCTGCCAGGCAGTACAGTCAAAGAAATTGCCACAAACCCCGAAGAAGCTGGGAA  370

Query  306  GTTTGTCTTTGAAATCATTCCAGCCTCATGGGACCAGAATCGCATGGGACAGGACTCCTATGTCCTCATGGCCA  379
            .||||||||||||.|.||||||||||||.|.||||||||.|||||.|||||.||||||||.|||||||||||||
Sbjct  371  ATTTGTCTTTGAAGTTATTCCAGCCTCAAGTGACCAGAACCGCATTGGACAAGACTCCTACGTCCTCATGGCCA  444

Query  380  GCTCTCAGGCGGAGATGGAGGAGTGGGTTAAATTCCTCAGGAGAGTTGCTGGCACACCCTGTGGAGCAGTGTTT  453
            ||||.||||..||||||||||||||||||||.|||||||||||||||||||||||.||||.||||||.||||||
Sbjct  445  GCTCCCAGGTAGAGATGGAGGAGTGGGTTAAGTTCCTCAGGAGAGTTGCTGGCACGCCCTCTGGAGCGGTGTTT  518

Query  454  GGCCAGCGCTTGGATGAGACTGTGGCCTATGAACAGAAATTCGGCCCCCATCTGGTGCCCATCCTGGTGGAGAA  527
            ||||||||..||||||||||||||||||||||.|||||.||.|||||.||.||||||||||||.||||||||||
Sbjct  519  GGCCAGCGTCTGGATGAGACTGTGGCCTATGAGCAGAAGTTTGGCCCTCACCTGGTGCCCATCTTGGTGGAGAA  592

Query  528  ATGTGCAGAGTTCATCCTGGAGCACGGCCGGAATGAAGAGGGCATCTTCCGTCTGCCTGGGCAGGACAACCTGG  601
            .||.||.||||||||||||||.||.||...||.||||||||||||||||||.|||||.||||||||||||||.|
Sbjct  593  GTGCGCTGAGTTCATCCTGGAACATGGTGTGAGTGAAGAGGGCATCTTCCGCCTGCCCGGGCAGGACAACCTTG  666

Query  602  TGAAGCAGCTGAGAGACGCTTTTGATGCTGGGGAGCGGCCCTCCTTTGACAGAGACACAGATGTGCACACTGTG  675
            ||||||||||||||||.|||||.|||||.|||||||||||||||||||||||.|||||||||||||||||.|||
Sbjct  667  TGAAGCAGCTGAGAGATGCTTTCGATGCGGGGGAGCGGCCCTCCTTTGACAGGGACACAGATGTGCACACGGTG  740

Query  676  GCTTCCCTGTTAAAGCTCTACCTCCGAGACCTCCCAGAGCCCGTGGTTCCCTGGAGCCAGTACGAAGGGTTCCT  749
            ||.||.||..||||||||||||||||||||||.||||||||.||||||||.|||||.|||||.|||||||||||
Sbjct  741  GCATCTCTACTAAAGCTCTACCTCCGAGACCTGCCAGAGCCTGTGGTTCCTTGGAGTCAGTATGAAGGGTTCCT  814

Query  750  GCTCTGTGGGCAGCTCACGAATGCGGATGAGGCAAAGGCTCAGCAGGAGTTGATGAAGCAGCTCTCCATCCTTC  823
            |||||||||||||||||.|||.||.|||||||||||||||||||||||||||.||||||||||.||.|.|||||
Sbjct  815  GCTCTGTGGGCAGCTCATGAACGCAGATGAGGCAAAGGCTCAGCAGGAGTTGGTGAAGCAGCTTTCTACCCTTC  888

Query  824  CTCGTGACAACTATAGTCTCCTGAGCTACATCTGCAGGTTCCTACATGAAATACAGCTGAACTGTGCTGTTAAC  897
            |.||.||||||||.|..||||||||||||||||||||.||.||.||||||||.||||||||||||||.||.|||
Sbjct  889  CCCGAGACAACTACAACCTCCTGAGCTACATCTGCAGATTTCTGCATGAAATCCAGCTGAACTGTGCCGTCAAC  962

Query  898  AAGATGAGTGTGGACAACCTGGCTACTGTGATTGGTGTGAATCTCATCAGGTCGAAGGTCGAAGACCCTGCCGT  971
            ||||||||.||||||||||||||.||||||||.||.|||||.|||||||||||||||||.||||||||.||.||
Sbjct  963  AAGATGAGCGTGGACAACCTGGCCACTGTGATCGGGGTGAACCTCATCAGGTCGAAGGTTGAAGACCCAGCTGT  1036

Query  972  GATCATGAG-----------------------------------------------------------------  980
            |||.|||||                                                                 
Sbjct 1037  GATTATGAGAGGTACACAGGCTGATCCTGCAGGGAAGCGGCTTGCTGGGCGTGACAGCGAGAACACTGCCCCCT  1110

Query  981  --------------------------------------------------------------------------  980
                                                                                      
Sbjct 1111  AGTGTCCGTTTGATGTCCTGCCGCTTACCGAGCTTGCCTACTTGACCTCTTCTGACTTTATTAACATCCCCCAT  1184

Query  981  --------------------------------------------------------------------------  980
                                                                                      
Sbjct 1185  GAGGTCAGCAGTGCAGGAATTAGGTCCCCTGTTCAATGGTCACGGATCGCAGCAGTCTAACCTCAAACCAATTA  1258

Query  981  --------------------------------------------------------------------------  980
                                                                                      
Sbjct 1259  ACTAGTGCTTTCCAGTCCTTTTATGACTTTAACATACCTTTAGCCAAGAAGAGCAAACAGGGTTTTATTTTACA  1332

Query  981  --------------------------------------------------------------------------  980
                                                                                      
Sbjct 1333  AGCCGGTTTCACAAAATGGTTGCTGTAAAGCTTGGCTGAAAGCTTTCTAAGGTCGTGACTTGGCTCAATAAGCA  1406

Query  981  --------------------------------------------------------------------------  980
                                                                                      
Sbjct 1407  AAAGTCCTGGCCGAGAAGACTCGTGATGGACGTGGGGAGGAAGTGTCCCTGACACCCATTTGCTTCAGGAGTAA  1480

Query  981  ----------------------------AGGGACTCCTCAGATCCAAAGAGTGATGACTATGATGATCAGAGAC  1026
                                        ||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 1481  TAACAAGACAGACCGTATTGAGGACCACAGGGACTCCTCAGATCCAAAGAGTGATGACCATGATGATCAGAGAC  1554

Query 1027  CATGAAGTCCTCTTCCCCAAGTCCAAGGATATACCCCTGTCACCCCCTGCCCAGAAAAATGACCCCAAGAAAGC  1100
            ||.||||||||||||||||||||.||||||..|||..|.||||||||||||||||||||.||..|||||||.||
Sbjct 1555  CACGAAGTCCTCTTCCCCAAGTCTAAGGATGCACCGATCTCACCCCCTGCCCAGAAAAACGATGCCAAGAAGGC  1628

Query 1101  TCCAGTGGCCCGAAGCTCTGTAGGCTGGGATGCCACTGAAGACCTCCGAATTTCTAGGACAGACAGCTTCAGTA  1174
            |||||||.|.|||||||||||.||.|||||||||||.|||||||..|...||||||||||||||||||||||||
Sbjct 1629  TCCAGTGCCGCGAAGCTCTGTGGGGTGGGATGCCACGGAAGACCCACCCCTTTCTAGGACAGACAGCTTCAGTA  1702

Query 1175  GCATGGTAAGGTGCAGAGAACCTTCCTGCTTCCATTGGGTTCTTCCTTTAGTCCAGGCCATCCCA-TGTAAGGC  1247
            .||..|.|||..|          |||||.|.|||                  ||||    ||||| ||   |.|
Sbjct 1703  ACACAGCAAGTAG----------TCCTGATGCCA------------------CCAG----TCCCACTG---GAC  1741

Query 1248  --CTGCTCTCGGGTG----GCAATTTGGGGAGTTTTAGGTGATG-CAGTGG---------CAG-----------  1294
              ||||   |..|||    |||            |.||  ||.| |||.||         |||           
Sbjct 1742  CACTGC---CCAGTGACCAGCA------------TCAG--GAAGACAGCGGAAAAGCCCCCAGGGAAAACCCAG  1798

Query 1295  -----TGGGCGCTGC--TGC--TACA--GACTCATCTGAACAC------ACCTTGAAAG-----CCT---GGCC  1343
                 |||..|.|||  |.|  ||.|  ||||||    |||.|      |||  |.|||     |||   |.||
Sbjct 1799  GAGACTGGAAGATGCAATCCCGTAAAAGGACTCA----AACGCTTCCCAACC--GGAAGTGTTTCCTGACGTCC  1866

Query 1344  TCTTTCC------------------------AAATCT---------AGTT----TCTATTGGCATCTT------  1374
            .|.||||                        ||||||         ||||    |||    .||||||      
Sbjct 1867  GCATTCCAAGGCACCACCAGCAGTAAACTGGAAATCTTTAAAAATGAGTTCTGGTCT----CCATCTTCAGAGG  1936

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 1937  CTAAGGCAGGAGAAGGGCACAGGCGAACTATGTCCCAAGACTTGCGCCACCTTTCCAATGACCAGCGGACTTCT  2010

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2011  ACCTACGATAATGTCCCCACCTCACCACAGTCCCAAGGGAACCCAGCAGGTGCACTCTCTCCCCCTGCCAGTGA  2084

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2085  CTCCAAGAGAGATGCTCTTGTTAGCACAGACTCTGAAATGGAGGCTGGAAGCAAGAACTCTGGCGAGGATGACC  2158

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2159  TTGATTCTCTGCAGAGGACAGTCCAGAGCCTACAGAAGGAAATAGAAACCCAGAAGCAGGTCTATGAGGAACAG  2232

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2233  ATTAAAAACCTGGAGAAGGAAAATTACGATGTCTGGGCTAAGGTGGTGAGGCTCAATGAAGAACTCGAGAGGGA  2306

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2307  GAGGAAGAAATTCGCGGCCCTGGAAATCAGCCTTCGAAATGTGGAGCGCTCCCGGGAGGACGTTGAGAAGAGGA  2380

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2381  ACAGAGTCTTGGAAGAAGAAGTCAAGGAGTTTGTGAAGTCGATGGAGAAGCCCAAGACAAAGACGGATCCTTGA  2454

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2455  GGGTCTGAGTGGTGTGGCAGGGACAGTCAACTCCACTCCATTTCTTCATGCTCCTAGTGAGCTGGAAGCAGGGT  2528

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2529  TACCTCCTAGGATGGACAGGGTATCTGAGGGATGTGCCACAATCCTCAGCAAATACACAGAAGTTGAGAGTGTA  2602

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2603  CAGGAGCACACCAGGACACTTGCCACCCTGTGCTGTGCTCCAAGGATTGCGTTATTCCACTGTGGGAAGAGTGA  2676

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2677  ACTGGAATCTTCCAGTGTATGACCAGGTCCAAAGGAGACATTTAAGGTGTGTGACATCTCAGGACCCCAGGCCA  2750

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2751  GAGCTGGGCCAAGGCCTCAGTTCTTTGTTGTCTCTGTGGCTGTCTTGCCTAGTCAGATGGTTCTGGTCGCTCTA  2824

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2825  AAACATGGCCAGAAAATATTTCTTCACTCTCCAGTGCTGGCCAACTGAGGGCTGCTTGGAGAGGCTGAACTGTT  2898

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2899  GGAATCCAGGATCAAACAATATTTATGAAAGCAAAATGAGTGAGAAAATTATATTCAAATAAAGAAAACAGAAA  2972

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 2973  ACAAAAATTGAGCAAGGATATTGGCAATCTAATGAAACACTTTTATTAGAATTAGTAAAAGGGGGTTTGGTAAA  3046

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3047  ATTAGTAAAAGCTGGCTCTGTGGCTGAGAGCACTGGCTGCTCTTTCAGAGGACTCAGCATCCACACGATGATGG  3120

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3121  CTAACAAACCTCTGTAGCTCCAGTTCCAGGAGATCTGACACCCTCTGAGGACACCATATATACATATGCTGCCC  3194

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3195  ATACATATATGCAAACAAACAAACACCCGTACACATCAAATACACACACACACACACACATACATACATACATA  3268

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3269  CATACATTCCAACAACAAAGAAAAAAATAATTAGTAAAAGGCACCTCTTGCCTGAAGCAGGTGAATCTTTCTTG  3342

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3343  TGGTACATGGCTGTGTGACCAGGGCTTTGGGTTCCATCCTGAGTCACCCTCCAGTGGACAAAACTTGTCTGCAA  3416

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3417  AGTCTCAGAGCAAAGGTTTCCAACTATGAAATGACTTTAGGGGTGTGGATTTGTATAGTGAATAGTCAAGATTA  3490

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3491  TTAATTATTATTGTCATTGTTGTTATTGCTATTCTACTTCAACAAAATGAAAATGGGTTTATTTGCTCTTTAGA  3564

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3565  GGGGGATCAGGCACAATCATCTGTTTTCTCAACTATAGCTAATGCCACCTGCCTTTTGCTGAGTTAATTATAAA  3638

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3639  AACAACCAACCAACAATATCGCTGATTACTCTCTGGCCACAATGGTCTCCCTGCTCCCGTGGCTTGCCCCAGGT  3712

Query 1375  --------------------------------------------------------------------------  1374
                                                                                      
Sbjct 3713  GGCAGTACCGCCCCAATTGCTGCTGTTGGCTTGCCACTGAACCTCTGTATTCTCAGTCATCTATTCCTTGCGGC  3786

Query 1375  -------------------------------------------  1374
                                                       
Sbjct 3787  TAGCTGTCACAAATCCTCTGTAACCCAGTAAAATCAAAACTCT  3829

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