Nucleotide Global Alignment
Description
- Query:
- TRCN0000479470
- Subject:
- XM_011539014.3
- Aligned Length:
- 3341
- Identities:
- 585
- Gaps:
- 2743
Alignment
Query 1 ATGCCGGCCGCCGGGAGTAACGAGCCGGACGGCGTCCTCAGCTATCAGAGACCAGATGAAGAAGCTGTGGTGGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TCAGGGTGGGACCAGTACAATTCTCAACATTCACTATGAAAAAGAAGAGCTGGAAGGTCACAGAACTCTGTATG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGGGAGTTCGGATGCCGCTTGGCCGGCAGAGCCATCGGCATCACCGCACTCATGGCCAGAAGCACCGGAGACGA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GGGCGGGGCAAAGGAGCCAGCCAGGGGGAGGAAGGCCTGGAAGCCCTGGCCCACGACACACCATCTCAGCGTGT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TCAGTTCATTCTTGGCACCGAGGAAGATGAAGAGCATGTGCCTCATGAGCTGTTTACAGAGCTGGATGAGATCT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GTATGAAAGAGGGAGAAGATGCTGAGTGGAAGGAAACAGCCAGGTGGCTGAAGTTTGAAGAAGATGTTGAAGAT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GGGGGAGAACGCTGGAGCAAGCCTTATGTGGCAACCCTTTCATTGCACAGCCTGTTTGAGCTAAGGAGCTGCCT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TATTAATGGAACAGTCCTCCTGGATATGCATGCAAATAGCATAGAAGAAATTTCAGACCTGATCCTGGATCAGC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AAGAACTGTCCAGTGACCTGAATGACAGCATGAGGGTTAAAGTGCGGGAAGCCCTTCTCAAAAAGCATCATCAT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CAGAATGAAAAGAAGAGAAACAACCTCATTCCCATTGTTCGCTCCTTTGCTGAGGTTGGCAAGAAGCAGTCTGA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 TCCTCATTTGATGGATAAACATGGTCAAACCGTGTCTCCTCAGTCTGTTCCAACTACAAATCTTGAAGTAAAAA 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 ATGGAGTGAATTGTGAACATAGTCCTGTGGATTTAAGCAAGGTAGACCTTCATTTCATGAAAAAAATTCCTACT 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GGGGCCGAGGCCTCCAATGTCCTGGTTGGAGAGGTGGATATTTTGGACCGTCCCATTGTTGCCTTTGTGAGGCT 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GTCTCCAGCTGTTCTTCTCTCAGGCCTAACAGAAGTGCCAATCCCAACAAGATTTTTGTTTATCTTATTGGGTC 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 CAGTAGGGAAAGGTCAGCAGTACCATGAGATTGGCAGATCCATGGCCACCATCATGACAGATGAGATTTTTCAT 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 GACGTAGCATATAAGGCAAAAGAGCGAGATGATCTCCTGGCGGGGATTGATGAGTTCCTAGACCAGGTGACGGT 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 GCTCCCTCCAGGAGAGTGGGATCCCTCCATTAGAATTGAGCCACCCAAAAATGTCCCTTCCCAGGAGAAAAGGA 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 AAATGCCTGGAGTTCCAAATGGAAATGTTTGCCACATAGAACAGGAACCACATGGGGGTCACAGTGGGCCAGAA 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 CTTCAGCGCACTGGGCGGCTATTTGGGGGCTTGGTGCTGGACATCAAGCGGAAGGCCCCCTGGTACTGGAGCGA 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 CTACCGAGATGCACTCAGCTTACAGTGTTTGGCTTCCTTTCTGTTCCTGTACTGTGCCTGCATGTCACCTGTCA 1480
|||||||||||||
Sbjct 1 -------------------------------------------------------------ATGTCACCTGTCA 13
Query 1481 TCACCTTTGGGGGACTGCTTGGAGAAGCCACTGAGGGACGCATAAGTGCAATTGAATCCTTGTTTGGAGCTTCC 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14 TCACCTTTGGGGGACTGCTTGGAGAAGCCACTGAGGGACGCATAAGTGCAATTGAATCCTTGTTTGGAGCTTCC 87
Query 1555 ATGACTGGGATTGCTTATTCCTTGTTTGCGGGACAGGCTCTCACCATCCTGGGAAGTACTGGACCAGTGCTTGT 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 88 ATGACTGGGATTGCTTATTCCTTGTTTGCGGGACAGGCTCTCACCATCCTGGGAAGTACTGGACCAGTGCTTGT 161
Query 1629 GTTTGAAAAGATTTTGTTCAAATTCTGCAAAGACTATGCTCTTTCATACCTCTCCCTGCGAGCTTGTATTGGAC 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 162 GTTTGAAAAGATTTTGTTCAAATTCTGCAAAGACTATGCTCTTTCATACCTCTCCCTGCGAGCTTGTATTGGAC 235
Query 1703 TGTGGACCGCTTTCCTGTGTATTGTCCTTGTGGCAACTGATGCCAGTTCCCTTGTCTGCTACATTACCCGTTTC 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 236 TGTGGACCGCTTTCCTGTGTATTGTCCTTGTGGCAACTGATGCCAGTTCCCTTGTCTGCTACATTACCCGTTTC 309
Query 1777 ACTGAAGAAGCATTTGCCTCCCTAATTTGCATTATTTTCATCTATGAAGCAATAGAAAAACTGATTCACCTGGC 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 310 ACTGAAGAAGCATTTGCCTCCCTAATTTGCATTATTTTCATCTATGAAGCAATAGAAAAACTGATTCACCTGGC 383
Query 1851 AGAGACCTACCCCATCCACATGCACAGCCAGCTGGACCACCTTAGCCTCTATTACTGCAGGTGTACTCTGCCAG 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 384 AGAGACCTACCCCATCCACATGCACAGCCAGCTGGACCACCTTAGCCTCTATTACTGCAGGTGTACTCTGCCAG 457
Query 1925 AGAATCCAAACAATCACACCCTCCAGTACTGGAAGGACCACAACATCGTGACAGCAGAAGTCCACTGGGCTAAC 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 458 AGAATCCAAACAATCACACCCTCCAGTACTGGAAGGACCACAACATCGTGACAGCAGAAGTCCACTGGGCTAAC 531
Query 1999 CTGACTGTCAGTGTAAGTC---------------------TGGGAGCTG------------------------- 2026
|||||||||||||.|.|.| |||||.|||
Sbjct 532 CTGACTGTCAGTGAATGCCAGGAGATGCATGGAGAGTTCATGGGATCTGCGTGCGGCCATCATGGACCCTACAC 605
Query 2027 -CCAGATGTCC----------------TAGCATTGTGACCAC-------------------------AGGTTTA 2058
||.||||||| |..|.||.|.||||| |.|||||
Sbjct 606 TCCTGATGTCCTCTTTTGGTCCTGTATTCTCTTTTTCACCACCTTCATCCTCTCAAGCACCTTAAAGACGTTTA 679
Query 2059 GGAGGGACTTCTAAG----------------------------------------------------------- 2073
.||.| ||
Sbjct 680 AGACG--------AGCCGTTATTTCCCAACCAGAGTACGCTCCATGGTGAGTGACTTTGCTGTTTTCCTCACTA 745
Query 2074 -------------------------------------------------------------------------- 2073
Sbjct 746 TCTTCACAATGGTGATTATTGATTTTTTGATTGGAGTCCCATCACCAAAGCTTCAAGTTCCCAGTGTGTTCAAG 819
Query 2074 -------------------------------------------------------------------------- 2073
Sbjct 820 CCAACAAGGGATGATCGCGGATGGATTATTAATCCCATTGGCCCCAATCCCTGGTGGACTGTGATAGCTGCAAT 893
Query 2074 -------------------------------------------------------------------------- 2073
Sbjct 894 TATCCCAGCTCTTCTCTGTACTATCTTGATATTCATGGATCAGCAGATCACAGCCGTCATTATTAACAGGAAGG 967
Query 2074 -------------------------------------------------------------------------- 2073
Sbjct 968 AACATAAGCTCAAGAAAGGCTGTGGCTACCACCTGGACCTACTGATGGTGGCCATCATGCTGGGTGTCTGCTCC 1041
Query 2074 -------------------------------------------------------------------------- 2073
Sbjct 1042 ATCATGGGCCTGCCCTGGTTTGTAGCTGCAACTGTCTTGTCCATCACACATGTGAACAGCCTCAAGCTAGAATC 1115
Query 2074 -------------------------------------------------------------------------- 2073
Sbjct 1116 TGAATGCTCTGCTCCTGGAGAACAGCCCAAGTTCCTGGGCATCCGAGAACAGAGAGTGACAGGCCTTATGATCT 1189
Query 2074 -------------------------------------------------------------------------- 2073
Sbjct 1190 TTGTGCTGATGGGCTGCTCAGTCTTCATGACGGCTATCTTAAAGTTTATTCCAATGCCAGTACTCTACGGAGTT 1263
Query 2074 -------------------------------------------------------------------------- 2073
Sbjct 1264 TTCCTTTACATGGGAGTTTCTTCACTACAGGGAATTCAGTCTCAGTTTCCATTTCTGTCCAGAGGAAATGGTGT 1337
Query 2074 -------------------------------------------------------------------------- 2073
Sbjct 1338 TACCTACCTTTCAGAGCAGTTCTTTGATCGTCTAAAGCTCTTTGGGATGCCCGCAAAGCACCAGCCAGATTTCA 1411
Query 2074 -------------------------------------------------------------------------- 2073
Sbjct 1412 TCTACCTGCGGCATGTGCCGCTGCGCAAAGTGCACCTCTTCACCCTCATCCAGTTGACCTGTCTCGTCCTGCTC 1485
Query 2074 -------------------------------------------------------------------------- 2073
Sbjct 1486 TGGGTCATCAAGGCATCTCCAGCTGCCATTGTTTTCCCAATGATGGTTTTGGCCTTGGTCTTTGTCAGGAAAGT 1559
Query 2074 -------------------------------------------------------------------------- 2073
Sbjct 1560 CATGGATCTCTGTTTCTCTAAGCGAGAGCTGAGCTGGCTAGATGATCTCATGCCTGAAAGCAAAAAGAAGAAGT 1633
Query 2074 -------------------------------------------------------------------------- 2073
Sbjct 1634 TGGATGATGCCAAAAAGAAGGCCAAGGAGGAAGAGGAGGCTGAGAAAATGTTAGAAATTGGGGGAGACAAGTTT 1707
Query 2074 -------------------------------------------------------------------------- 2073
Sbjct 1708 CCCTTAGAGAGCAGGAAGTTACTAAGTAGTCCTGGAAAGAACATCAGTTGCAGATGTGACCCCTCTGAGATTAA 1781
Query 2074 -------------------------------------------------------------------------- 2073
Sbjct 1782 TATATCTGATGAAATGCCTAAAACTACAGTTTGGAAAGCTCTCAGTATGAATTCTGGAAATGCAAAGGAAAAGA 1855
Query 2074 ----------- 2073
Sbjct 1856 GTCTCTTCAAC 1866
