Nucleotide Global Alignment

Description

Query:
TRCN0000479506
Subject:
XM_006507242.2
Aligned Length:
2177
Identities:
1843
Gaps:
103

Alignment

Query    1  ATGGCAACCCCGGCGGCGGTCAACCCTCCGGAAATGGCTTCAGACATACCTGGATCTGTGACGTTGCCCGTTGC  74
                                             |||||.|||||||||||.|||||||||.|.|||||.|||||
Sbjct    1  ---------------------------------ATGGCGTCAGACATACCAGGATCTGTGGCCTTGCCTGTTGC  41

Query   75  CCCCATGGCGGCCACCGGACAGGTGAGGATGGCGGGGGCCATGCCTGCCCGTGGAGGAAAGCGGCGTTCCGGAA  148
            |||||||||.|||||||||||||||||.|||||.|||||||||||||||||.|||||||||||.||.|||||||
Sbjct   42  CCCCATGGCAGCCACCGGACAGGTGAGAATGGCAGGGGCCATGCCTGCCCGAGGAGGAAAGCGTCGATCCGGAA  115

Query  149  TGGACTTCGATGATGAAGATGGTGAAGGCCCCAGTAAATTTTCAAGAGAGAATCATAGTGAAATCGAAAGGCGC  222
            |||||||||||||.||||||||||||||.|||||||||||.|||||||||||.||.|||||.||.||..|||||
Sbjct  116  TGGACTTCGATGACGAAGATGGTGAAGGTCCCAGTAAATTCTCAAGAGAGAACCACAGTGAGATTGAGCGGCGC  189

Query  223  AGACGGAACAAGATGACTCAGTACATCACGGAGCTCTCCGACATGGTCCCCACATGCAGCGCACTGGCTCGGAA  296
            ||.|||||||||||||||||.||.||.|||||.||||||||||||||.|||||.|||||.|||||||||.||||
Sbjct  190  AGGCGGAACAAGATGACTCAATATATTACGGAACTCTCCGACATGGTTCCCACCTGCAGTGCACTGGCTAGGAA  263

Query  297  GCCAGACAAGCTCACCATCCTCCGCATGGCCGTCTCGCACATGAAGTCCATGAGGGGTACAGGGAACAAGTCCA  370
            ||||||||||||.||||||||.||||||||.||||||||||||||||||||||||||.||.||.|||||.||.|
Sbjct  264  GCCAGACAAGCTGACCATCCTGCGCATGGCGGTCTCGCACATGAAGTCCATGAGGGGCACCGGCAACAAATCGA  337

Query  371  CCGATGGCGCGTACAAGCCTTCCTTCCTCACAGAGCAGGAACTGAAGCATCTCATCCTTGAAGCAGCTGATGGA  444
            |.||.|||||.||||||||||||||||||||.||||||||||||||||||||||||||.|||||.|||||||||
Sbjct  338  CTGACGGCGCCTACAAGCCTTCCTTCCTCACTGAGCAGGAACTGAAGCATCTCATCCTGGAAGCCGCTGATGGA  411

Query  445  TTTCTGTTTGTGGTGGCTGCTGAGACAGGGCGAGTGATTTATGTGTCTGACTCCGTCACCCCTGTTCTGAACCA  518
            |||||||||||||||||.||||||||||||.||||.||.||.||||||||.||.|||||.|||||.||||||||
Sbjct  412  TTTCTGTTTGTGGTGGCAGCTGAGACAGGGAGAGTCATCTACGTGTCTGATTCGGTCACTCCTGTCCTGAACCA  485

Query  519  GCCCCAGTCAGAGTGGTTTGGGAGCACACTGTATGAACAGGTGCATCCTGATGACGTGGAGAAGCTGAGAGAGC  592
            |||.|||||||||||||||||||||||.||.|||||.||||||||.|||||||||||||||||.|||||.||.|
Sbjct  486  GCCACAGTCAGAGTGGTTTGGGAGCACGCTTTATGAGCAGGTGCACCCTGATGACGTGGAGAAACTGAGGGAAC  559

Query  593  AACTGTGCACCTCAGAAAACTCAATGACAGGCCGGATCTTGGACCTGAAGACTGGGACGGTCAAGAAAGAAGGG  666
            |.||||||||.||.||||||||.|||||||||||.|||.|||||||||||||||||||.||.|||||.||.||.
Sbjct  560  AGCTGTGCACTTCGGAAAACTCCATGACAGGCCGCATCCTGGACCTGAAGACTGGGACAGTGAAGAAGGAGGGA  633

Query  667  CAGCAGTCATCCATGAGGATGTGCATGGGCTCGCGGCGGTCTTTCATCTGCAGGATGAGGTGTGGAAATGCTCC  740
            |||||||||||||||.|.|||||.||||||||.|||||.||.||||||||.|||||||||||||||||.|||||
Sbjct  634  CAGCAGTCATCCATGCGCATGTGTATGGGCTCTCGGCGCTCCTTCATCTGTAGGATGAGGTGTGGAAACGCTCC  707

Query  741  TTTGGACCACCTTCCTCTAAACAGAATAACCACCATGAGGAAAAGGTTCAGGAATGGCCTTGGCCCTGTGAAAG  814
            .|||||||||||.|||.|.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  708  CTTGGACCACCTGCCTTTGAACAGAATAACCACCATGAGGAAAAGGTTCAGGAATGGCCTTGGCCCTGTGAAAG  781

Query  815  AAGGAGAAGCCCAATATGCTGTGGTCCACTGTACAGGATACATCAAGGCCTGGCCACCAGCAGGAATGACCATA  888
            |||||||||||||.|||||||||||||||||.|||||.|||||||||||.||||||||||||||||||||||||
Sbjct  782  AAGGAGAAGCCCAGTATGCTGTGGTCCACTGCACAGGTTACATCAAGGCTTGGCCACCAGCAGGAATGACCATA  855

Query  889  CCTGAAGAAGACGCTGATGTGGGACAAGGCAGTAAATATTGCCTCGTGGCAATTGGGAGACTCCAGGTGACCAG  962
            ||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  856  CCCGAAGAAGACGCTGATGTCGGACAAGGCAGTAAATATTGCCTCGTGGCAATTGGGAGGCTCCAGGTGACCAG  929

Query  963  CTCTCCTGTATGCATGGACATGAATGGGATGTCGGTGCCCACAGAGTTCTTATCCCGGCATAACTCCGATGGAA  1036
            |||||||||.|||||||||||||..||.|||||.|||||||||||||||.|.||.|||||.|||||.|||||.|
Sbjct  930  CTCTCCTGTGTGCATGGACATGAGCGGCATGTCAGTGCCCACAGAGTTCCTGTCACGGCACAACTCTGATGGGA  1003

Query 1037  TCATCACATTTGTGGATCCAAGATGTATCAGTGTGATTGGCTACCAACCGCAGGATCTTCTGGGAAAGGACATT  1110
            |.|||||.||||||||.||.|||||.||||||||||||||||||||.||.|||||.||||||||||||||.|||
Sbjct 1004  TTATCACGTTTGTGGACCCCAGATGCATCAGTGTGATTGGCTACCAGCCCCAGGACCTTCTGGGAAAGGATATT  1077

Query 1111  TTGGAATTCTGCCACCCTGAGGATCAAAGCCATCTGCGTGAGAGCTTCCAGCAGGTGGTTAAGCTGAAAGGCCA  1184
            ||||||||.|||||||||||||||||.|||||.||.||.|||||||||||.|||||||||||||||||.|||||
Sbjct 1078  TTGGAATTTTGCCACCCTGAGGATCAGAGCCACCTACGGGAGAGCTTCCAACAGGTGGTTAAGCTGAAGGGCCA  1151

Query 1185  AGTCCTGTCGGTCATGTATCGATTTCGCACCAAGAACCGGGAGTGGATGTTGATCCGCACCAGCAGCTTCACAT  1258
            |||.|||||||||||||||||.||.|||||||||||||||||||||.||||||||||.||||||||||||||.|
Sbjct 1152  AGTGCTGTCGGTCATGTATCGGTTCCGCACCAAGAACCGGGAGTGGCTGTTGATCCGTACCAGCAGCTTCACCT  1225

Query 1259  TCCAGAATCCCTATTCTGATGAGATTGAGTACATCATCTGCACCAACACCAACGTCAAGCAACTTCAGCAACAG  1332
            |||||||.|||||.|||||||||||.||||||.|||||||||||||||||||.|||||||||||||||||||||
Sbjct 1226  TCCAGAACCCCTACTCTGATGAGATCGAGTACGTCATCTGCACCAACACCAATGTCAAGCAACTTCAGCAACAG  1299

Query 1333  CAGGCAGAATTGGAAGTGCACCAGAGAGATGGATTGTCATCGTATGACTTATCCCAGGTCCCCGTCCCCAACCT  1406
            |||||||||.||||.||.||.|||.|||||||..||||.||.|||||||||||.||||||||.||.||||||||
Sbjct 1300  CAGGCAGAACTGGAGGTACATCAGCGAGATGGGCTGTCGTCATATGACTTATCTCAGGTCCCAGTACCCAACCT  1373

Query 1407  ACCAGCCGGTGTTCATGAGGCCGGGAAGTCCGTGGAAAAGGCGGATGCAATCTTCTCCCAGGAAAGAGATCCTC  1480
            |||.||.||||||||.||||||||||||||.|||||||||||.|||||||||||||||||.||.|||||.||||
Sbjct 1374  ACCCGCTGGTGTTCACGAGGCCGGGAAGTCTGTGGAAAAGGCAGATGCAATCTTCTCCCAAGAGAGAGACCCTC  1447

Query 1481  GGTTTGCTGAAATGTTTGCAGGAATTAGTGCATCGGAGAAGAAGATGATGAGCTCAGCCTCTGCAGCAGGAACC  1554
            |.||||||||.|||||||||||.||.||||||||.||||||||||||||||||||||||||.|||.||||.|.|
Sbjct 1448  GTTTTGCTGAGATGTTTGCAGGCATCAGTGCATCTGAGAAGAAGATGATGAGCTCAGCCTCAGCATCAGGCAGC  1521

Query 1555  CAGCAGATCTACTCCCAAGGAAGCCCATTTCCCT-CTGGACACTCCGGGAAGGCCTTCAGCTCTTCAGTGGTTC  1627
            |||||||||||||||||||||||.||| |||||| |.||.|||||.||.|||||||||||||||||.|||||.|
Sbjct 1522  CAGCAGATCTACTCCCAAGGAAGTCCA-TTCCCTGCCGGGCACTCGGGCAAGGCCTTCAGCTCTTCCGTGGTCC  1594

Query 1628  ATGTGCCTGGAGTGAATGATATTCAGTCCTCTTCTTCCACGGGCCAGAACATGTCCCAAATCTCCCGGCAGCTA  1701
            |||||||||||||||||||.|||||||||||.||.||.|||||.||||||||.|||||.|||||.||||||||.
Sbjct 1595  ATGTGCCTGGAGTGAATGACATTCAGTCCTCCTCCTCAACGGGACAGAACATATCCCAGATCTCTCGGCAGCTG  1668

Query 1702  AACCAGAGTCAGGTGGCATGGACAGGGAGTCGTCCGCCCTTTCCGGGACAGCAAATCCCATCTCAGTCCAGCAA  1775
            ||||||.|.|||||||||||||||||.||.|||||.||.||.||.||.||||               |||||||
Sbjct 1669  AACCAGGGCCAGGTGGCATGGACAGGCAGCCGTCCACCGTTCCCAGGGCAGC---------------CCAGCAA  1727

Query 1776  GACTCAGTCATCTCCCTTTGGGATTGGAACGAGCCACACCTACCCGGCAGACCCCTCTTCCTACAGCCCCCTCT  1849
            |||.|||||||||.||||.||.||||||.|.||||||.|.||||||||.|||||.||.||||||||.||.||||
Sbjct 1728  GACGCAGTCATCTGCCTTCGGAATTGGATCAAGCCACCCTTACCCGGCTGACCCTTCATCCTACAGTCCTCTCT  1801

Query 1850  CCAGCCCAGCTACCTCCTCGCCAAGTGGGAATGCCTACTCCAGTCTTGCCAACAGGACTCCAGGGTTCGCTGAA  1923
            |||||||||||.|||||||.||||||||.||.||.|||.||||||||||||||||||||||||||||.|||||.
Sbjct 1802  CCAGCCCAGCTGCCTCCTCACCAAGTGGAAACGCATACCCCAGTCTTGCCAACAGGACTCCAGGGTTTGCTGAG  1875

Query 1924  AGTGGACAAAGTAGCGGGCAGTTCCAAGGGCGGCCCTCGGAAGTCTGGTCGCAGTGGCAAAGCCAGCACCATGG  1997
            ||||||||.|||.|||||||||||||.||.|||||||||||.||||||||.||||||||.||||||||.||.||
Sbjct 1876  AGTGGACAGAGTGGCGGGCAGTTCCAGGGCCGGCCCTCGGAGGTCTGGTCCCAGTGGCAGAGCCAGCATCACGG  1949

Query 1998  CCAGCAGAGCGGTGAGCAGCACTCCCACCAGCAGCCCGGTCAGACTGAAGTGTTCCAGGACATGCTGCCCATGC  2071
            .|||||||||||||||||||||||.||.||||||||.||.||||||||||||||||||||||||||.|||||||
Sbjct 1950  ACAGCAGAGCGGTGAGCAGCACTCGCATCAGCAGCCTGGCCAGACTGAAGTGTTCCAGGACATGCTACCCATGC  2023

Query 2072  CAGGAGATC-----CAGGGAATGAATGGTGGTCTCCCCACT-----CCCGGCAGCACTTTAGGCAGCCCATAAG  2135
            |.||.||.|     |||||   ||.|||        |.|||     ..||  ||.|||||  ||.|.||     
Sbjct 2024  CGGGCGACCCGACGCAGGG---GACTGG--------CAACTATAACATCG--AGGACTTT--GCTGACC-----  2077

Query 2136  CTATGCGAGAATG------------------  2148
                 .|.|.|||                  
Sbjct 2078  -----TGGGCATGTTCCCTCCATTTTCTGAG  2103

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