Nucleotide Global Alignment

Description

• Query: TRCN0000479543
• Subject: XM_006532004.3
• Aligned Length: 1507
• Identities: 1115
• Gaps: 224

Alignment

Query    1  ATGACCCCAGGGGCTCTGCTGATGCTGCTGGGGGCGCTGGGGGCGCCGCTCGCCCCAGGCGTCCGCGGCTCGGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGCGGAGGGTCGACTCCGGGAGAAACTTTTCTCTGGCTATGATAGCTCCGTGCGGCCAGCGCGGGAGGTGGGAG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACCGTGTCAGGGTCAGCGTTGGTCTCATCCTGGCGCAACTCATCAGCCTGAACGAGAAGGATGAAGAGATGAGC  222
                                                                                ||||||
Sbjct    1  --------------------------------------------------------------------ATGAGC  6

Query  223  ACAAAGGTGTACTTAGACCTGGAGTGGACTGACTACAGGCTGAGCTGGGACCCTGCGGAGCACGACGGCATCGA  296
            |||||||||||||||||||||||||||||.|||||||||.|.|||||||||||.||.||.||.||.||||||||
Sbjct    7  ACAAAGGTGTACTTAGACCTGGAGTGGACCGACTACAGGTTAAGCTGGGACCCCGCAGAACATGATGGCATCGA  80

Query  297  TTCGCTCCGCATCACGGCGGAATCCGTGTGGCTCCCTGACGTGGTGCTACTGAACAACAATGATGGGAATTTTG  370
            |||.|||||||||||.||.||||||||.|||||||||||.||||||||.||||||||||||||.||.|||||.|
Sbjct   81  TTCTCTCCGCATCACTGCTGAATCCGTTTGGCTCCCTGATGTGGTGCTGCTGAACAACAATGACGGAAATTTCG  154

Query  371  ACGTGGCTCTGGACATTAGCGTCGTGGTGTCCTCCGACGGCTCCGTGCGTTGGCAACCCCCGGGCATCTATCGC  444
            ||||.||.||||||||.|..||.|||||.||.|.|||.|||||.|||||.|||||||||||.|||.|.||.|||
Sbjct  155  ACGTTGCCCTGGACATCAATGTTGTGGTATCTTTCGAGGGCTCTGTGCGCTGGCAACCCCCTGGCCTGTACCGC  228

Query  445  AGCAGCTGCAGCATCCAGGTCACCTACTTCCCCTTCGACTGGCAGAATTGCACTATGGTGTTCAGCTCCTACAG  518
            |||||||||||||||||||||||||||||||||||.|||||||||||.|||||.||||||||.||.||||||||
Sbjct  229  AGCAGCTGCAGCATCCAGGTCACCTACTTCCCCTTTGACTGGCAGAACTGCACCATGGTGTTTAGTTCCTACAG  302

Query  519  CTACGACAGCTCGGAGGTCAGCCTGCAGACAGGCCTGGGTCCTGACG----GGCAAGGGCATCAGGAAATCCAC  588
            |||.||||||||.||||||||||||.||||.|||||||.||||||.|    ||..|||    ||||||.||.||
Sbjct  303  CTATGACAGCTCTGAGGTCAGCCTGAAGACGGGCCTGGATCCTGAAGGAGAGGAGAGG----CAGGAAGTCTAC  372

Query  589  ATTCATGAAGGGACTTTCATTGAGAATGGCCAGTGGGAGATTATCCACAAGCCCTCTCGGCTAATCCAGCCTCC  662
            ||||||||||||||.|||||||||||||||||.|||||||||||||||||.||.|||.||.|||||||.|.|||
Sbjct  373  ATTCATGAAGGGACCTTCATTGAGAATGGCCAATGGGAGATTATCCACAAACCTTCTAGGTTAATCCAACTTCC  446

Query  663  AGGCGATCCTAGGGGAGGGAGGGAAGGACAGCGCCAGGAAGTCATCTTCTACCTCATCATCCGCCGCAAGCCTC  736
            |||.||||..||.||.||||.||||||.||.|...|||||||.||||||||.|||||.||.||.||.|||||||
Sbjct  447  AGGGGATCAGAGAGGTGGGAAGGAAGGGCATCATGAGGAAGTTATCTTCTATCTCATTATTCGGCGGAAGCCTC  520

Query  737  TCTTCTACCTGGTCAACGTCATTGCCCCATGCATCCTCATCACTCTTCTGGCCATCTTCGTCTTCTACCTGCCA  810
            |||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||.|||||||||||.|||
Sbjct  521  TCTTCTACCTGGTCAACGTCATTGCCCCATGCATCCTCATCACGCTCCTGGCCATCTTTGTCTTCTACCTCCCA  594

Query  811  CCAGATGCAGGAGAGAAGATGGGGCTCTCAATCTTTGCCCTGCTGACCCTTACTGTGTTCCTGCTGCTGCTGGC  884
            |||||||||||||||||||||||||||||.|||||||||||||||||.||.|||||||||.||||||||.||||
Sbjct  595  CCAGATGCAGGAGAGAAGATGGGGCTCTCCATCTTTGCCCTGCTGACGCTCACTGTGTTCTTGCTGCTGTTGGC  668

Query  885  TGACAAAGTACCTGAGACCTCACTATCAGTACCCATTATTATCAAGTACCTCATGTTTACCATGGTCCTCGTCA  958
            .||||||||.|||||||||||.||..|.||.|||||.||||||||||||||||||||||||||||||||.||||
Sbjct  669  CGACAAAGTGCCTGAGACCTCCCTGGCGGTGCCCATCATTATCAAGTACCTCATGTTTACCATGGTCCTTGTCA  742

Query  959  CCTTCTCAGTCATCCTTAGTGTCGTGGTTCTCAACCTGCACCACCGCTCACCCCACACCCACCAAATGCCCCTT  1032
            |||||||.||.|||||||||||.|||||.|||||||||||.||.|||||||||||||||||||||||||||.||
Sbjct  743  CCTTCTCCGTTATCCTTAGTGTTGTGGTCCTCAACCTGCATCATCGCTCACCCCACACCCACCAAATGCCCTTT  816

Query 1033  TGGGTCCGTCAGATCTTCATTCACAAACTTCCGCTGTACCTGCGTCTAAAAAGGCCCAAACCCGAGAGAGACCT  1106
            ||||||||.|||||||||||||||||.||.||.|..||||||.||||.||.||||||||||||||||||||||.
Sbjct  817  TGGGTCCGCCAGATCTTCATTCACAAGCTCCCTCCATACCTGGGTCTGAAGAGGCCCAAACCCGAGAGAGACCA  890

Query 1107  GATGCCGGAGCCCCCTCACTGTTCTTCTCCAGGAAGTGGCTGGGGTCGGGGAACAGATGAATATTTCATCCGGA  1180
            ..|.||.||.||.|.|||||.|..|||||||.|||||||||||||..|.|||||.|||||||||||||||||||
Sbjct  891  ACTCCCTGAACCACATCACTCTCTTTCTCCAAGAAGTGGCTGGGGCAGAGGAACTGATGAATATTTCATCCGGA  964

Query 1181  AGCCGCCAAGTGATTTTCTCTTCCCCAAACCCAATAGGTTCCAGCCTGAACTGTCTGCCCCTGATCTGCGGCGA  1254
            ||||.||||||||||||||.|||||.||||..||.|||||.|||||||||...||||||||.||.|||||.|||
Sbjct  965  AGCCTCCAAGTGATTTTCTTTTCCCTAAACTTAACAGGTTTCAGCCTGAATCATCTGCCCCGGACCTGCGACGA  1038

Query 1255  TTTATCGATGGTCCAAACCGGGCTGTGGCCCTGCTTCCGGAGCTACGGGAGGTCGTCTCCTCTATCAGCTACAT  1328
            ||||||||||||||||.|||||||||.|..||||.||.|||||||||.||||||.|.|||||.|||||||||||
Sbjct 1039  TTTATCGATGGTCCAACCCGGGCTGTAGGTCTGCCTCAGGAGCTACGAGAGGTCATTTCCTCAATCAGCTACAT  1112

Query 1329  CGCTCGACAGCTGCAGGAACAGGAGGACCACGATGCGCTGAAGGAGGACTGGCAGTTTGTGGCCATGGTAGTGG  1402
            .||.||||||||.||||||||||||||||||||.||.||||||||||||||||||||||||||||||||.||||
Sbjct 1113  GGCCCGACAGCTTCAGGAACAGGAGGACCACGACGCACTGAAGGAGGACTGGCAGTTTGTGGCCATGGTTGTGG  1186

Query 1403  ACCGCCTCTTCCTGTGGACTTTCATCATCTTCACCAGCGTTGGGACCCTAGTCATCTTCCTGGACGCCACGTAC  1476
            ||||.||.||.||||||||.||||||.|.|||||.|||||.||||||||||||||.|||||.||.|||||||||
Sbjct 1187  ACCGTCTTTTTCTGTGGACATTCATCGTTTTCACAAGCGTCGGGACCCTAGTCATTTTCCTAGATGCCACGTAC  1260

Query 1477  CACTTGCCCCCTCCAGACCCCTTTCCT  1503
            ||.|||||||||||.||.||.||.|||
Sbjct 1261  CATTTGCCCCCTCCTGAACCTTTCCCT  1287