Nucleotide Global Alignment
Description
- Query:
- TRCN0000479564
- Subject:
- XR_375610.2
- Aligned Length:
- 2059
- Identities:
- 1085
- Gaps:
- 896
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGTCGTGAACGTGCTGCCGCCTATCAGTCACTCAGTCGCCTGGAGTCGGAGTTGCTATTTCTAGGCTTGTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGTTGGGTTCGGGCCCCCAGGTAAATAGCCACAGAAGGCTACCAAACAAGATAAATAATTGTCTCCAAGTAGA 148
Query 1 ---------------ATGAGTGGGCATCGATCAACAAGGAAAAGATGTGGAGATTCTCACCCGGAGTCCCCAGT 59
||||||||||||||.||||||||||||.|||||||||||||||||||.||||||||.||
Sbjct 149 AGAAAACCAAGCTCCATGAGTGGGCATCGGTCAACAAGGAAACGATGTGGAGATTCTCACCCAGAGTCCCCTGT 222
Query 60 GGGCTTCGGGCATATGAGTACTACAGGATGTGTATTAAATAAATTGTTTCAGTTACCAACACCACCATTGTCAA 133
||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||.||||||
Sbjct 223 GGGCTTTGGGCATATGAGTACTACAGGGTGTGTATTAAATAAATTGTTTCAGTTACCGACACCACCACTGTCAA 296
Query 134 GACACCAACTAAAGCGGCTAGAAGAACACAGATATCAAAGTGCTGGACGGTCCCTGCTTGAGCCCTTAATGCAA 207
|||||||..||||.|||||||||||||||||.|||||.|||||||||||||||||.||.|||||||||||||||
Sbjct 297 GACACCAGTTAAAACGGCTAGAAGAACACAGGTATCAGAGTGCTGGACGGTCCCTTCTCGAGCCCTTAATGCAA 370
Query 208 GGGTATTGGGAATGGCTCGTTAGAAGAGTTCCCTCCTGGATTGCCCCAAATCTCATCACCATCATTGGACTGTC 281
||.||.|||||||||||.|||.|||||||.|||||.|||||||||||||||||||||||||||||||||||.||
Sbjct 371 GGATACTGGGAATGGCTAGTTGGAAGAGTACCCTCATGGATTGCCCCAAATCTCATCACCATCATTGGACTATC 444
Query 282 AATAAACATCTGTACAACTATTTTATTAGTCTTCTACTGCCCTACAGCTACAGAGCAGGCACCTCTGTGGGCAT 355
||||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 445 AATAAATATCTGTACAACTATTTTGTTAGTCTTCTACTGCCCTACAGCTACAGAGCAGGCACCTCTGTGGGCTT 518
Query 356 ATATTGCTTGTGCCTGTGGCCTTTTCATTTACCAGTCTTTGGATGCTATTGATGGGAAACAGGCAAGAAGAACC 429
|||||||.|||||.||||||||||||||||||||||||.|||||||.||.||||||||||||||.||||||||.
Sbjct 519 ATATTGCCTGTGCTTGTGGCCTTTTCATTTACCAGTCTCTGGATGCCATAGATGGGAAACAGGCCAGAAGAACT 592
Query 430 AATAGTAGTTCTCCTCTGGGAGAACTTTTTGATCATGGCTGTGATTCACTATCAACAGTTTTTGTGGTTCTCGG 503
||.|||||.|||||||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||.||
Sbjct 593 AACAGTAGCTCTCCTCTGGGAGAACTTTTTGATCATGGCTGTGACTCACTATCGACAGTTTTTGTGGTTCTTGG 666
Query 504 AACTTGTATTGCAGTGCAGCTGGGGACAAACCCTGATTGGATGTTTTTTTGTTGTTTTGCGGGGACATTTATGT 577
|||||||||||||||.||.||.||||||||.|||||.|||||||||||||||||||||||.||||||||.||||
Sbjct 667 AACTTGTATTGCAGTACAACTTGGGACAAATCCTGACTGGATGTTTTTTTGTTGTTTTGCTGGGACATTCATGT 740
Query 578 TCTATTGTGCGCACTGGCAAACGTATGTTTCTGGAACATTGCGATTTGGAATAATTGATGTGACTGAAGTGCAA 651
||||||||||.|||||||||||.|||||||||||||||||||||||||||||
Sbjct 741 TCTATTGTGCACACTGGCAAACATATGTTTCTGGAACATTGCGATTTGGAAT---------------------- 792
Query 652 ATCTTCATAATAATCATGCATTTGCTGGCAGTGATTGGAGGACCACCTTTTTGGCAATCTATGATTCCAGTGCT 725
|||||.|||.|
Sbjct 793 ---------------------------------------------------------------ATTCCTGTGTT 803
Query 726 GAATATTCAAATGAAAATTTTTCCTGCACTTTGTACTGTAGCAGGGACCATATTTTCCTGTACAAATTACTTCC 799
||||||||||||||||.||.|||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 804 GAATATTCAAATGAAACTTCTTCCTGCACTTTGTACTGTGGCAGGGACCATATTTTCCTGTACAAATTACTTCC 877
Query 800 GTGTAATCTTCACAGGTGGTGTTGGCAAAAATGGATCAACAATAGCAGGAACAAGTGTCCTTTCTCCTTTTCTC 873
||||||||||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||.
Sbjct 878 GTGTAATCTTCACAGGTGGTGTTGGCAAAAATGGGTCAACCATAGCAGGAACAAGTGTCCTTTCTCCTTTTCTG 951
Query 874 CATATTGGATCAGTGATTACATTAGCTGCAATGATCTACAAGAAATCTGCAGTTCAGCTTTTTGAAAAGCATCC 947
|||||||||||||||||.||.|||||||..|||||||||||||||||.||||||||||||||||||||||||||
Sbjct 952 CATATTGGATCAGTGATCACGTTAGCTGTTATGATCTACAAGAAATCAGCAGTTCAGCTTTTTGAAAAGCATCC 1025
Query 948 CTGTCTTTATATACTGACATTTGGTTTTGTGTCTGCTAAAATCACTAATAAGCTTGTGGTTGCACACATGACGA 1021
.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||||
Sbjct 1026 ATGTCTTTATATACTGACATTTGGTTTTGTGTCGGCTAAAATCACTAATAAGCTTGTGGTTGCTCACATGACGA 1099
Query 1022 AAAGTGAAATGCATTTGCATGACACAGCATTCATAGGTCCGGCACTTTTGTTTCTGGACCAGTATTTTAACAGC 1095
||||||||||||||||||||||||||||||||||||||||.||||||.||||||||||||||||||||||||||
Sbjct 1100 AAAGTGAAATGCATTTGCATGACACAGCATTCATAGGTCCAGCACTTCTGTTTCTGGACCAGTATTTTAACAGC 1173
Query 1096 TTTATTGATGAATATATTGTACTTTGGATTGCCCTGGTTTTCTCTTTCTTTGATTTGATCCGCTACTGTGTCAG 1169
||.||||||||||||||.|||||||||||||||.||.|.||||||||||||||||||||.||.|||||||||||
Sbjct 1174 TTCATTGATGAATATATAGTACTTTGGATTGCCTTGATCTTCTCTTTCTTTGATTTGATTCGTTACTGTGTCAG 1247
Query 1170 TGTTTGCAATCAGATTGCGTCTCACCTGCACATACATGTCTTCAGAATCAAGGTCTCTACAGCTCATTCTAATC 1243
||||||||||||||||||.|||||||||||.|||||||||||||||||.||.|.||||||||||||.|||||||
Sbjct 1248 TGTTTGCAATCAGATTGCATCTCACCTGCATATACATGTCTTCAGAATTAAAGCCTCTACAGCTCACTCTAATC 1321
Query 1244 ATCAT--------------------------------------------------------------------- 1248
||||.
Sbjct 1322 ATCACTAAGGATGTGTCTGGGTTCTACTAAGCTCATGGTTCCTGCAAGAAGGAATTCGAACATATTAAGGACAA 1395
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1396 CAGGGGTGGATAAGAACAAATATAATTTATAATAATCAATGTCATATAACTTTCATTCTTTGTTACTGGTAACA 1469
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1470 CTCCCTAACTGTCCTGTTTAGAATGGGAATTTCAGGCCCCATCCTATAAACTGAATATGTTGTCAAACAGGGTT 1543
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1544 TGGCTCCAGAAAGCATGCAGGGAAACTACCGAGTGTTTGTGATTATTCAGAATATCACTATCATAGGAGCACAT 1617
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1618 CCCCACTGGTGGTAAATCTAATGTAAAATTTTTGCAGGCCAAAAGATTGTTGCTTTATGATTTTAACAAATCAT 1691
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1692 CATCTTTTCGTAACACCTTGTTTATTGTCTTCTCAGATGTTCTTTTGTAAGGAGCTCAGCTTGTGGCACATACA 1765
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1766 TCTTACTAGCTTGTGAGGTGAGAGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTG 1839
Query 1249 -------------------------------------------------------------------------- 1248
Sbjct 1840 TTGAGGAAGTGATTTTATTATCAATCAAGAAATGGTGTTTCTCACGGGCTTGGGAAATCTTGATAGCATGCAGA 1913
Query 1249 ------------------------------------------------------------- 1248
Sbjct 1914 TAATGTGGTAACTTTGTCAATCCATTTTATTTTTTTAAATAAATATATGATCTCAGAACCA 1974
