Nucleotide Global Alignment

Description

Query:
TRCN0000479571
Subject:
NR_144490.2
Aligned Length:
2092
Identities:
1275
Gaps:
817

Alignment

Query    1  ---------------------------------------ATGAGCAAACGGAAGAGAAAGAGAAGTGTCCAGGA  35
                                                   |||||||||||||||||||||||||||||||||||
Sbjct    1  AGTCTGGGAGTCTTTGGAGTAAGAATGGCCTTGGAAGGGATGAGCAAACGGAAGAGAAAGAGAAGTGTCCAGGA  74

Query   36  GGGAGAGAATCCTGACGACGGCGTTCGCGGGAGTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCT  109
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGGAGAGAATCCTGACGACGGCGTTCGCGGGAGTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCT  148

Query  110  TATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCCAG  183
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TATTTCGCGGCGAACACCATTCCAGAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCCAG  222

Query  184  ATTCAACCCGTGTACGTGCCTGTGCCTAAA--------------------------------------------  213
            ||||||||||||||||||||||||||||||                                            
Sbjct  223  ATTCAACCCGTGTACGTGCCTGTGCCTAAAGTAAGTCACTGGGCTTTCTTCCCGAATAGCTCGTTAGAACCACT  296

Query  214  --------------------------------------------------------------------------  213
                                                                                      
Sbjct  297  TACATACAAAGCAATCTTCTTACCTACCGCGTGAAGCGTGATTTCTAAAGGGGGCAGACAGGATTCATTTTAAG  370

Query  214  --------------------------------------------------------------------------  213
                                                                                      
Sbjct  371  TAACCTTTCATGACTCTTACATACCAGTGAGAGAGAAGAGATTCTCATTTAGAAAGACTGAATTATGGCTTAGG  444

Query  214  -----------------------------------------------------CAAACCATCAAAAAAACGAAA  234
                                                                 |||||||||||||||||||||
Sbjct  445  GTCAGAATTCTAGAAGTATGGGGTCTCAAATATAACTTCAAACTTTTAAAAAGCAAACCATCAAAAAAACGAAA  518

Query  235  CGGAATGAGGAGGAAGAAAGTACATCCCAGATTGAAAGACCACTTTCGCAAGAACCTGCCAAAAAAGTGAAAGC  308
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CGGAATGAGGAGGAAGAAAGTACATCCCAGATTGAAAGACCACTTTCGCAAGAACCTGCCAAAAAAGTGAAAGC  592

Query  309  GAAGAAGAAACACACTAACGCAGAAAAAAAGTTGGCAGACAGGGAAAGCGCTCTAGCGAGTGCTGATTTAGAAG  382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GAAGAAGAAACACACTAACGCAGAAAAAAAGTTGGCAGACAGGGAAAGCGCTCTAGCGAGTGCTGATTTAGAAG  666

Query  383  AAGAAATTCACCAGAAACAAGGGCAGAAAAGGAAAAATTCTCAACCTGGTGTTAAAGTAGCAGATAGAAAAATA  456
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAGAAATTCACCAGAAACAAGGGCAGAAAAGGAAAAATTCTCAACCTGGTGTTAAAGTAGCAGATAGAAAAATA  740

Query  457  CTTGATGACACAGAAGACACAGTTGTCAGTCAAAGAAAGAAAATTCAAATCAACCAAGAAGAAGAGAGATTAAA  530
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTTGATGACACAGAAGACACAGTTGTCAGTCAAAGAAAGAAAATTCAAATCAACCAAGAAGAAGAGAGATTAAA  814

Query  531  GAATGAGAGAACTGTGTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTTTAAAG  604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GAATGAGAGAACTGTGTTTGTTGGGAATTTGCCTGTTACATGTAATAAGAAGAAGCTGAAGTCGTTTTTTAAAG  888

Query  605  AGTATGGACAAATAGAATCTGTACGATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCA  678
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGTATGGACAAATAGAATCTGTACGATTTCGTTCTCTGATTCCAGCAGAGGGAACGCTATCCAAAAAGTTGGCA  962

Query  679  GCAATAAAACGTAAAATTCATCCTGATCAGAAAAATATTAATGCCTATGTTGTGTTTAAGGAGGAGAGTGCTGC  752
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GCAATAAAACGTAAAATTCATCCTGATCAGAAAAATATTAATGCCTATGTTGTGTTTAAGGAGGAGAGTGCTGC  1036

Query  753  CACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGA  826
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTCGTATTAGAGTTGATCTCGCATCTGAGA  1110

Query  827  CCTCATCTAGAGACAAGAGATCGGTTTTTGTGGGGAATCTCCCTTATAAAGTTGAAGAATCTGCCATTGAGAAG  900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CCTCATCTAGAGACAAGAGATCGGTTTTTGTGGGGAATCTCCCTTATAAAGTTGAAGAATCTGCCATTGAGAAG  1184

Query  901  CACTTTCTGGACTGTGGAAGTATCATGGCCGTGAGGATTGTGAGAGACAAAATGACAGGCATCGGCAAAGGGTT  974
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CACTTTCTGGACTGTGGAAGTATCATGGCCGTGAGGATTGTGAGAGACAAAATGACAGGCATCGGCAAAGGGTT  1258

Query  975  TGGCTATGTGCTCTTTGAGAATACAGATTCTGTTCATCTTGCTCTGAAATTAAATAATTCTGAACTCATGGGGA  1048
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TGGCTATGTGCTCTTTGAGAATACAGATTCTGTTCATCTTGCTCTGAAATTAAATAATTCTGAACTCATGGGGA  1332

Query 1049  GAAAACTCAGAGTCATGCGTTCTGTTAATAAAGAAAAATTTAAACAACAAAATTCAAATCCACGATTGAAGAAT  1122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GAAAACTCAGAGTCATGCGTTCTGTTAATAAAGAAAAATTTAAACAACAAAATTCAAATCCACGATTGAAGAAT  1406

Query 1123  GTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGCAGAAGGACATCCTAAAAGCTTATTTATTGG  1196
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGCAGAAGGACATCCTAAAAGCTTATTTATTGG  1480

Query 1197  AGAAAAAGCTGTTCTCCTTAAAACGAAGAAGAAAGGACAGAAGAAAAGTGGACGCCCTAAGAAACAGAGAAAAC  1270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AGAAAAAGCTGTTCTCCTTAAAACGAAGAAGAAAGGACAGAAGAAAAGTGGACGCCCTAAGAAACAGAGAAAAC  1554

Query 1271  AGAAA---------------------------------------------------------------------  1275
            |||||                                                                     
Sbjct 1555  AGAAATAACAACCAGGAACTGCTTTTTCTTTTCCTGCTGAGTACTGCTAATAAAAGTGCTATTATCTGCTGATA  1628

Query 1276  --------------------------------------------------------------------------  1275
                                                                                      
Sbjct 1629  GCATCGTCTGCTATTCATGTGTTGAGTTTTATACTTCTTTATGGATGGTGTATGTGAAATGTGGAGACTTCCAC  1702

Query 1276  --------------------------------------------------------------------------  1275
                                                                                      
Sbjct 1703  ATTCTCAGTTTATTCACATTGTGATACTACCTTTGAAGGTTTTTTTGTTTTTGTTTTGTTTTTTGAGATGGAGT  1776

Query 1276  --------------------------------------------------------------------------  1275
                                                                                      
Sbjct 1777  TTGGCTGTTGTCTCCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTTCTGGGTTCAA  1850

Query 1276  --------------------------------------------------------------------------  1275
                                                                                      
Sbjct 1851  GCGCTTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCCTGCCACCACGCCTGGCTAATTTTTTGT  1924

Query 1276  --------------------------------------------------------------------------  1275
                                                                                      
Sbjct 1925  ATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTG  1998

Query 1276  --------------------------------------------------------------------------  1275
                                                                                      
Sbjct 1999  CCTTGGCCTCTCAAAGTGCTGGGATTACAGGCGTGAGTCACTGCACCCAAGCCTCCTTTCTCTTTTGCCTATTA  2072

Query 1276  --------------------  1275
                                
Sbjct 2073  AACCTCTGCTCTTAACCTTA  2092

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