Nucleotide Global Alignment

Description

Query:
TRCN0000479648
Subject:
NM_027289.1
Aligned Length:
1384
Identities:
1054
Gaps:
215

Alignment

Query    1  ATGCGGAGACTGGTGCACGACCTCCTGCCCCCCGAGGTCTGCAGTCTCCTGAACCCAGCAGCCATCTACGCCAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CAACGAGATCAGCCTGCGTGACGTTGAGGTCTACGGCTTTGACTACGACTACACCCTGGACCAGTATGCAGACG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CACTGCACCCCGAGATCTTCAGTACCGCCCGTGACATCCTGATCGAGCACTACAAGAGCCTTCTGATGAAGATT  222
                                                                             |||||.|||
Sbjct    1  -----------------------------------------------------------------ATGAAAATT  9

Query  223  GACGCCTTCCACTACGTGCAGCTGGGGACAGCCTACAGGGGCCTCCAGCCTGTGCCAGACGAGGAGGTGATTGA  296
            |||||.||.|||||.||.||.|||||.||.|||||||||||||||.||||||||||.|||||.||.|||||.||
Sbjct   10  GACGCTTTTCACTATGTACAACTGGGAACGGCCTACAGGGGCCTCAAGCCTGTGCCGGACGATGAAGTGATCGA  83

Query  297  GCTGTATGGGGGTACCCAGCACATCCCACTATACCAGATGAGTGGCTTCTATGGCAAGGGTCCCTCCATTAAGC  370
            .|||||.||.||.|||||||||||||||||.|||||||||||.|||||||||||||||||.||.||.||.||||
Sbjct   84  CCTGTACGGCGGCACCCAGCACATCCCACTCTACCAGATGAGCGGCTTCTATGGCAAGGGCCCATCTATCAAGC  157

Query  371  AGTTCATGGACATCTTCTCGCTACCGGAGATGGCTCTGCTGTCCTGTGTGGTGGACTACTTTCTGGGCCACAGC  444
            ||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  158  AGTTCATGGACATCTTCTCGCTCCCAGAGATGGCTCTGCTGTCCTGTGTGGTGGACTACTTTCTGGGCCACGGC  231

Query  445  CTGGAGTTTGACCAAGCACATCTCTACAAGGACGTGACGGACGCCATCCGAGACGTGCATGTGAAGGGCCTCAT  518
            ||||||||||||||||.|||||||||||||||.||||||||.||.|||||.||.||||||||.|||||||||||
Sbjct  232  CTGGAGTTTGACCAAGTACATCTCTACAAGGATGTGACGGATGCTATCCGCGATGTGCATGTAAAGGGCCTCAT  305

Query  519  GTACCAGTGGATCGAGCAGGACATGGAGAAGTACATCCTGAGAGGGGATGAGACGTTTGCTGTCCTGAGCCGCC  592
            ||||||||||||||||||.||||||||||||||||||||||||||.||||||||.|||||.||.||||||||||
Sbjct  306  GTACCAGTGGATCGAGCAAGACATGGAGAAGTACATCCTGAGAGGAGATGAGACATTTGCGGTGCTGAGCCGCC  379

Query  593  TGGTGGCCCATGGGAAGCAGCTGTTCCTCATCACCAACAGTCCTTTCAGCTTCGTAGACAAGGGGATGCGGCAC  666
            ||||||||||||||||.||||||||||||||.|||||||||||.||||||||.||.|||||.||.|||||||||
Sbjct  380  TGGTGGCCCATGGGAAACAGCTGTTCCTCATTACCAACAGTCCCTTCAGCTTTGTGGACAAAGGTATGCGGCAC  453

Query  667  ATGGTGGGTCCCGATTGGCGCCAGCTCTTCGATGTGGTCATTGTCCAGGCAGACAAGCCCAGCTTCTTCACTGA  740
            |||||.|||||||||||||||||.||||||||.||.|||||.|||||||||||||||||||.|||.|||||.||
Sbjct  454  ATGGTAGGTCCCGATTGGCGCCAACTCTTCGACGTCGTCATCGTCCAGGCAGACAAGCCCAACTTTTTCACCGA  527

Query  741  CCGGCGCAAGCCTTTCAGAAAACTCGATGAGAAGGGCTCACTTCAGTGGGACCGGATCACCCGCTTGGAAAAGG  814
            |.|||||||||||||..|.||.||.||.|||||||||||.||.||.||||||||.|||||.|||.|.||.||||
Sbjct  528  CAGGCGCAAGCCTTTTCGCAAGCTTGACGAGAAGGGCTCCCTCCACTGGGACCGTATCACTCGCCTAGAGAAGG  601

Query  815  GCAAGATCTATCGGCAGGGAAACCTGTTTGA-CTTCTTGCGCTTGACGGAATGGCGTGGCCCCCGCGTGCTCTA  887
            ||||||||||||||||||||||||||||||| .||||| ||..|||||||||||||.||.||.||.||||||||
Sbjct  602  GCAAGATCTATCGGCAGGGAAACCTGTTTGATTTTCTT-CGTCTGACGGAATGGCGAGGGCCGCGTGTGCTCTA  674

Query  888  CTTCGGGGACCACCTCTATAGTGATCTGGCGGATCTCATGCTGCGGCACGGCTGGCGCACAGGCGCCATCATCC  961
            ||||||.||||||||.||.|||||.|||||||||||||||||||||||||||||||||||.||.||||||||||
Sbjct  675  CTTCGGTGACCACCTTTACAGTGACCTGGCGGATCTCATGCTGCGGCACGGCTGGCGCACGGGAGCCATCATCC  748

Query  962  CCGAGCTGGAGCGTGAGATCCGCATCATCAACACGGAGCAGTACATGCACTCGCTGACGTGGCAACAGGCGCTC  1035
            |.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||.|||
Sbjct  749  CTGAGCTGGAGCGCGAGATCCGCATCATCAACACGGAGCAGTACATGCACTCGCTGACCTGGCAGCAGGCTCTC  822

Query 1036  ACGGGGCTGCTGGAGCGCATGCAGACCTATCAGGACGCGGAGTCGAGGCAGGTGCTGGCTGCCTGGATGAAAGA  1109
            ||.||||||||||||||||||||||||||||||||.||.|||||..||||||||||||||.||||||||||.||
Sbjct  823  ACTGGGCTGCTGGAGCGCATGCAGACCTATCAGGATGCAGAGTCACGGCAGGTGCTGGCTACCTGGATGAAGGA  896

Query 1110  GCGGCAGGAGCTGAGGTGCATCACCAAGGCCCTGTTCAATGCGCAGTTCGGCAGCATCTTCCGCACCTTCCACA  1183
            ||||||.||.|||||.||||||||.||||||||.|||||.||.||||||||.||||||||||||||||||||||
Sbjct  897  GCGGCAAGAACTGAGATGCATCACAAAGGCCCTATTCAACGCCCAGTTCGGGAGCATCTTCCGCACCTTCCACA  970

Query 1184  ACCCCACCTACTTCTCAAGGCGCCTCGTGCGCTTCTCTGACCTCTACATGGCCTCCCTCAGCTGCCTGCTCAAC  1257
            ||||.|||||||||||..|||||||||||||||||||.|||||||||||||||||.||||||||||||||||||
Sbjct  971  ACCCTACCTACTTCTCCCGGCGCCTCGTGCGCTTCTCCGACCTCTACATGGCCTCACTCAGCTGCCTGCTCAAC  1044

Query 1258  TACCGCGTGGACTTCACCTTCTACCCACGCCGTACGCCGCTGCAGCACGAGGCACCCCTCTGGATGGACCAGCT  1331
            ||||||||.|||||||||||||||||.|||||.||.||.|||||||||||||||||||||||||||||||||||
Sbjct 1045  TACCGCGTAGACTTCACCTTCTACCCGCGCCGCACACCCCTGCAGCACGAGGCACCCCTCTGGATGGACCAGCT  1118

Query 1332  CTGCACCGGCTGCATGAAGACCCCCTTCCTTGGTGACATGGCCCACATCCGC  1383
            .|||||.||||||||||||||.|||||.||||||||||||||||||||||||
Sbjct 1119  GTGCACTGGCTGCATGAAGACACCCTTTCTTGGTGACATGGCCCACATCCGC  1170

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