Nucleotide Global Alignment

Description

Query:
TRCN0000479707
Subject:
XR_001737282.1
Aligned Length:
2511
Identities:
1646
Gaps:
769

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGTGTGTGGCGCCTGCGCAGTGGCGGTGACCACCGGCTCGCGGCGCGTGGAGGCTGCTCCCAGCCGCGCGCGA  74

Query    1  --------------------------------------------ATGC-AGC------TGG------------A  11
                                                        .||| |||      |||            |
Sbjct   75  GTCAGACTCGGGTGGGGGTCCCGGCGGCGGTAGCGGCGGCGGCGGTGCGAGCATGTCGTGGCTCTTCGGCATTA  148

Query   12  A-----GCCC------TGAA---------CC-----------TGCTGCACACACTAGTCTGGG-----------  43
            |     ||||      ||||         ||           |||.||.|.|.| ||.|.|||           
Sbjct  149  ACAAGGGCCCCAAGGGTGAAGGCGCGGGGCCGCCGCCGCCTTTGCCGCCCGCGC-AGCCCGGGGCCGAGGGCGG  221

Query   44  -------CACGGAGTCTCTG-----CCGTGCCGGAGC------------TGTGCA-----GAC--------ACA  80
                   |.||| ||   ||     ||| |||||.||            .|.|||     |||        .|.
Sbjct  222  CGGGGACCGCGG-GT---TGGGAGACCG-GCCGGCGCCCAAGGACAAATGGAGCAACTTCGACCCCACCGGCCT  290

Query   81  GGAGCG-GCTGTC-AGGCAG-------------------------TGCCA-----GCCCTGA------------  110
            |||||| ||.|.| ||||.|                         |||||     |||||||            
Sbjct  291  GGAGCGCGCCGCCAAGGCGGCGCGCGAGCTGGAGCACTCGCGTTATGCCAAGGACGCCCTGAATCTGGCACAGA  364

Query  111  -GCAAGTGC--------CAGCTGGTG----AGTGCTGTGCTCTGCAGGAGTATGAGGCCGCCGTGGAGCAGCTC  171
             |||.|.||        |||.|||.|    ||| |...||||  .|.|||||||||||||||||||||||||||
Sbjct  365  TGCAGGAGCAGACGCTGCAGTTGGAGCAACAGT-CCAAGCTC--AAAGAGTATGAGGCCGCCGTGGAGCAGCTC  435

Query  172  AAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACCCGGCAGCACCAGGC  245
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  436  AAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACCCGGCAGCACCAGGC  509

Query  246  CAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCAGCAACTTCTCAATG  319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  510  CAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCAGCAACTTCTCAATG  583

Query  320  AGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCACCGTGGAGCGGGAG  393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  584  AGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCACCGTGGAGCGGGAG  657

Query  394  ATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGACCGAGGCCCGGGCGCGCGCCAAGGCCGAGCGGGA  467
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct  658  ATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGGCCGAGGCCCGGGCGCGCGCCAAGGCCGAGCGGGA  731

Query  468  GAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGTCCGAGCACCGTCAGACCGTCTTGGAGTCCATCA  541
            ||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct  732  GAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGGCCGAGCACCGTCAGACCGTCTTGGAGTCCATCA  805

Query  542  GGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACCGGGACAAAGTGACAGCCACGGTG  615
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct  806  GGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACTGGGACAAAGTGACAGCCACGGTG  879

Query  616  GCTGGGCTGACGCTGCTGGCTGTCGGGGTCTACTCAGCCAAGAATGCGACAGC-CGTCACTGGCCGCTTCATCG  688
            |||||||||||||||||||||||.|||||||||||||||||||||||.|| || .|||.|.|||||||||||||
Sbjct  880  GCTGGGCTGACGCTGCTGGCTGTTGGGGTCTACTCAGCCAAGAATGCCAC-GCTTGTCGCCGGCCGCTTCATCG  952

Query  689  AGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTGGAGGCGCTGCGGCACCCC  762
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  953  AGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTTGAGGCGCTGCGGCACCCC  1026

Query  763  ATCCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGTGCTGGAGGGTGTTGTGCTTAGTCCCAGCCTGGA  836
            ||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||.||||||||||||||
Sbjct 1027  ATCCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGCGCTGGAGGGTGTTGTGCTCAGTCCCAGCCTGGA  1100

Query  837  AGCACGGGTGCGCGACATCGCCATAGCAACCAGGAACACCAAGAAGAACCGGGGCCTGTACAGGCACATCCTGC  910
            ||||||||||||||||||||||||||||||.||||||||||||||||||||..|||||||||||.||||||||.
Sbjct 1101  AGCACGGGTGCGCGACATCGCCATAGCAACAAGGAACACCAAGAAGAACCGCAGCCTGTACAGGAACATCCTGA  1174

Query  911  TGTATGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACTCAGGCATGGACTACGCC  984
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1175  TGTACGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACTCAGGCATGGACTACGCC  1248

Query  985  ATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCACAAGCTCTTTGACTGGGC  1058
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1249  ATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCACAAGCTCTTTGACTGGGC  1322

Query 1059  CAATACCAGCCGGCGCGGCCTCCTGCTCTTCATGGATGAAGCAGACGCCTTCCTTCGGAAGCGAGCCACTGAGG  1132
            ||||||||||||||||||||||||||||||..||||||||||.||||||||||||||||||||||||||.|||.
Sbjct 1323  CAATACCAGCCGGCGCGGCCTCCTGCTCTTTGTGGATGAAGCGGACGCCTTCCTTCGGAAGCGAGCCACCGAGA  1396

Query 1133  AGATAAGCAAGGACCTCAGAGCCACACTGAACGCCTTCCTGTACCACATGGGCCAACACAGCAACAAATTCATG  1206
            ||||||||.||||||||||.|||||||||||||||||||||||||.||.||||||.|||||||||||.||||||
Sbjct 1397  AGATAAGCGAGGACCTCAGGGCCACACTGAACGCCTTCCTGTACCGCACGGGCCAGCACAGCAACAAGTTCATG  1470

Query 1207  CTGGTCCTGGCCAGCAATCTGCCTGAGCAGTTCGACTGTGCCATCAACAGCCGCATTGACGTGATGGTCCACTT  1280
            |||||||||||||||||.|..||.||||||||||||||.||||||||...||||||..|.|.||||||||||||
Sbjct 1471  CTGGTCCTGGCCAGCAACCAACCAGAGCAGTTCGACTGGGCCATCAATGACCGCATCAATGAGATGGTCCACTT  1544

Query 1281  CGACCTGCCGCAGCAGGAGGAGCGGGAGCGCCTGGTGAGACTGCATTTTGACAACTGTGTTCTTAAGCCGGCCA  1354
            |||||||||...|||||||||.|||||||||||                                         
Sbjct 1545  CGACCTGCCAGGGCAGGAGGAACGGGAGCGCCT-----------------------------------------  1577

Query 1355  CAGAAGGAAAACGGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGCTCGGAGGTCGCTCGGCTGACG  1428
                        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1578  ------------GGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGCTCGGAGGTCGCTCGGCTGACG  1639

Query 1429  GAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCAGGCCACGGCATATGCCTCCAAGGACGG  1502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||.|||||||
Sbjct 1640  GAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCAGGCCACGGCGTATGCCTCCGAGGACGG  1713

Query 1503  GGTCCTCACTGAGGCCATGATGGACGCCTGTGTGCAAGATGCTGTCCAGCAGTACCGACAGAAGATGCGCTGGC  1576
            ||||||.||.|||||||||||||||.||.|.|||||||||||||||||||||.|||..|||||||||.||||||
Sbjct 1714  GGTCCTGACCGAGGCCATGATGGACACCCGCGTGCAAGATGCTGTCCAGCAGCACCAGCAGAAGATGTGCTGGC  1787

Query 1577  TGAAGGCGGAGGGGCCTGGGCGCGGGGTCGAGCACCCCCTATCCGGAGTCCA-AGGCGAGACCCTCACCTCATG  1649
            ||||||||||.|||||||||||.||||.|||||.|.|||.||||.||||||| ||| ||||.||.||.||||.|
Sbjct 1788  TGAAGGCGGAAGGGCCTGGGCGTGGGGACGAGCCCTCCCCATCCTGAGTCCACAGG-GAGATCCACAGCTCACG  1860

Query 1650  GAGCCTGGCCACGGACCCCTCCTACCCCTGCCTTGCCGGCCCCTGCACATTTAGGATATGCTCCTGGATGGGGA  1723
            ||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1861  GAGCCTGGCCGCGGACCCCTCCCACCCCTGCCTTGCCGGCCCCTGCACATTTAGGATATGCTCCTGGGTGGGGA  1934

Query 1724  CTGGGCTGTGCCCAGGGCCTCTGTCCCCCAGGATGTCTTGTGGTGGCGGTCGGCCGTTCTGCCCCCCAGGGCAC  1797
            |||||||||||||||||||||||||||||||||||||||||||||..|||||||||||||||||||||||||||
Sbjct 1935  CTGGGCTGTGCCCAGGGCCTCTGTCCCCCAGGATGTCTTGTGGTGCGGGTCGGCCGTTCTGCCCCCCAGGGCAC  2008

Query 1798  CCCCTGTTG-----------------------------------------------------------------  1806
            |||||||||                                                                 
Sbjct 2009  CCCCTGTTGTAGGCACTGGCTAGGGAGGGGCAGGCCTCCTTCCTGCCCCTCGAGACACTCTTGGGAGATGCATT  2082

Query 1807  --------------------------------------------------------------------------  1806
                                                                                      
Sbjct 2083  TTCCGTCTGGCTCACAGGGGGAGGGTGAGGCTTTGCACCCCAGCCCCTGCCCAGGCCACTGTGAGGGTGGGTGC  2156

Query 1807  --------------------------------------------------------------------------  1806
                                                                                      
Sbjct 2157  TGGCTGAGCCCCCGGGGCAGCAGGAGCCAGGCAGGTGATGTCTTTGTTCTCGGCTCCCACAGCAGAGCCAGGTG  2230

Query 1807  --------------------------------------------------------------------------  1806
                                                                                      
Sbjct 2231  AGGGGGCGCCTGCCAGGGCCAGACCCAGGTGGGGCAGCCTGAACCCTGCTTCCCCCTGTGGCCGGCATGCCCCG  2304

Query 1807  --------------------------------------------------------------------------  1806
                                                                                      
Sbjct 2305  ATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGAGGGAACCTGGCGGGGGTGTCTGAGGCCGCACTGTC  2378

Query 1807  ---------------------------------------------------------------------  1806
                                                                                 
Sbjct 2379  AGCTGGCCGGTCCAAGCCTGTGGCTGGAGCTGGGGTCTGTTTACCTAATAAAGTCCCACAGGTGCCTCA  2447

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