Nucleotide Global Alignment

Description

Query:
TRCN0000479724
Subject:
NM_006864.4
Aligned Length:
1916
Identities:
803
Gaps:
994

Alignment

Query    1  ATGACCCTCACCCTCTCAGTCCTGATTTGCCTCGGGCTGAGTGTGGGCCCCAGGACCTGCGTGCAGGCAGGCAC  74
            |||||.|.|.|||||.|||.||||.|.|||||.|||||||||.||||||||||||||.||.||||||||||..|
Sbjct    1  ATGACGCCCGCCCTCACAGCCCTGCTCTGCCTTGGGCTGAGTCTGGGCCCCAGGACCCGCATGCAGGCAGGGCC  74

Query   75  CCTCCCCAAACCCACCCTCTGGGCTGAGCCAGCCTCTGTGAT-AGCTCGGGGGAAGCCCGTGACCCTCTGGTGT  147
            |.||||||||||||||||||||||||||||||.||||||||| |||| ||||||..|||||||||.||||||||
Sbjct   75  CTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCT-GGGGGAGCCCCGTGACCATCTGGTGT  147

Query  148  CAGGGGCCCCTGGAGACTGAGGAGTACCGTCTGGATAAGGAGGGACTCCCATGGGCCC-GGAAGAGACAGAACC  220
            ||||||..|||||||.|..|||||||||..||||||||.||||||..|||| |.|||| ||.|.|||.|.||||
Sbjct  148  CAGGGGAGCCTGGAGGCCCAGGAGTACCAACTGGATAAAGAGGGAAGCCCA-GAGCCCTGGGACAGAAATAACC  220

Query  221  CACTGGAGCCTGGAGC-----CAAGGCCAAGTTCCACATTCCATCCACGGTGTATGACA-------GTGCAGGG  282
            |||||||.||     |     ||||||||..|||..|||.||||||       ||||||       .|||||||
Sbjct  221  CACTGGAACC-----CAAGAACAAGGCCAGATTCTCCATCCCATCC-------ATGACACAGCACCATGCAGGG  282

Query  283  CGATACCGCTGCTACTATGAGACCCCTGCAGGCTGGTCAGAGCCCAGTGACCCCCTGGAGCTGGTGGCGACAGG  356
            .|||||||||||.|||||.|.|.|.||||||||||||||||||||||.||||||||||||||||||..||||||
Sbjct  283  AGATACCGCTGCCACTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGACCCCCTGGAGCTGGTGATGACAGG  356

Query  357  ATTCTATGCA--GAACCCACTCTTTTAGCCCTGCCGAGTCCTGTGGTGGCCTCAGGAGGAAATGTGACCCTCCA  428
            ||||||  ||  .|||||||.||.|.|||||||||.||.|||||||||||||||||.||.|||.|||||||||.
Sbjct  357  ATTCTA--CAACAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTCAGGGGGGAATATGACCCTCCG  428

Query  429  GTGTGATACACTGGACGGACTTCTCAC--GTTTGTTCTTGTTG-AGGA---AGAACAGAAGCTCCCCAGGACCC  496
            .||||...|||.|.|.|||  |.||||  .||||||| ||.|| ||||   ||||||..||||||||.||||||
Sbjct  429  ATGTGGCTCACAGAAGGGA--TATCACCATTTTGTTC-TGATGAAGGAAGGAGAACACCAGCTCCCCCGGACCC  499

Query  497  TGTACTCACAGAAGCTCCCCAAAGGGCCATCCCAGGCCCTGTTCCCTGTGGGTCCCGTGACCCCCAGCTGCAGG  570
            ||.||||||||.||||||.||..|||...|.|||||||||||||||||||||.|||||||||||||||..||||
Sbjct  500  TGGACTCACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGACCCCCAGCCACAGG  573

Query  571  TGGAGGTTCAGATGCTATTACTATTACAGGAAAAACCCTC-AGGTGTGGTCGAACCCCAGTGACCTCCTGGAGA  643
            ||||||||||.|||||||||||||||.| .|||.||||.| .|||||||||..||||||||||||.||||||||
Sbjct  574  TGGAGGTTCACATGCTATTACTATTATA-CAAACACCCCCTGGGTGTGGTCCCACCCCAGTGACCCCCTGGAGA  646

Query  644  TTCTGGTCCCAGGCGTGTCTAGGAAGCCCTCCCTCCTGATCCCGCAGGGCTCTGTCGTGGCCCGCGGAGGC--A  715
            |||||..|.||||||||||||||||||||||||||||||.||.|||||||.|||||.||||||..|  |||  |
Sbjct  647  TTCTGCCCTCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCCTGGCCCCTG--GGCAGA  718

Query  716  GCCTGACCCTGCAGTGTCGCTCTGATGTCGGCTATGACATATTCGTTCTGTACAAGGAGGGGGAACATGACCTC  789
            ||||||||||.||||||.||||||||||||||||.||||.|||.||||||||.|||||||||||||.||||.||
Sbjct  719  GCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAGGGGGAACGTGACTTC  792

Query  790  GTCCAGGGCTCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTC  863
            .|||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  793  CTCCAGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTC  866

Query  864  CCACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCC-CCTAGGTGGTCGGCCCCCAGCGACCCCCTG  936
            |.||||||||||||||||.|||||.|||||||||||||||||| ||.| |||||||||||||||.|||||||||
Sbjct  867  CTACGGGGGCCAGTACAGGTGCTATGGTGCACACAACCTCTCCTCCGA-GTGGTCGGCCCCCAGTGACCCCCTG  939

Query  937  GCCATC-----CAC------------------------------------------------------------  945
            |.||||     |||                                                            
Sbjct  940  GACATCCTGATCACAGGACAGATCTATGACACCGTCTCCCTGTCAGCACAGCCGGGCCCCACAGTGGCCTCAGG  1013

Query  946  --------------------------------------------------------------------------  945
                                                                                      
Sbjct 1014  AGAGAACATGACCCTGCTGTGTCAGTCACGGGGGTATTTTGACACTTTCCTTCTGACCAAAGAAGGGGCAGCCC  1087

Query  946  --------------------------------------------------------------------------  945
                                                                                      
Sbjct 1088  ATCCCCCACTGCGTCTGAGATCAATGTACGGAGCTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGACC  1161

Query  946  --------------------------------------------------------------------------  945
                                                                                      
Sbjct 1162  TCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCACGCAGCTCCAACCCCCACCTGCTGTCTTTCCCCAGTGA  1235

Query  946  --------------------------------------------------------------------------  945
                                                                                      
Sbjct 1236  GCCCCTGGAACTCATGGTCTCAGGACACTCTGGAGGCTCCAGCCTCCCACCCACAGGGCCGCCCTCCACACCTG  1309

Query  946  --------------------------------------------------------------------------  945
                                                                                      
Sbjct 1310  GTCTGGGAAGATACCTGGAGGTTTTGATTGGGGTCTCGGTGGCCTTCGTCCTGCTGCTCTTCCTCCTCCTCTTC  1383

Query  946  --------------------------------------------------------------------------  945
                                                                                      
Sbjct 1384  CTCCTCCTCCTCCGTCAGCGTCACAGCAAACACAGGACATCTGACCAGAGAAAGACTGATTTCCAGCGTCCTGC  1457

Query  946  --------------------------------------------------------------------------  945
                                                                                      
Sbjct 1458  AGGGGCTGCGGAGACAGAGCCCAAGGACAGGGGCCTGCTGAGGAGGTCCAGCCCAGCTGCTGACGTCCAGGAAG  1531

Query  946  --------------------------------------------------------------------------  945
                                                                                      
Sbjct 1532  AAAACCTCTATGCTGCTGTGAAGGACACACAGTCTGAGGACAGGGTGGAGCTGGACAGTCAGAGCCCACACGAT  1605

Query  946  --------------------------------------------------------------------------  945
                                                                                      
Sbjct 1606  GAAGACCCCCAGGCAGTGACGTATGCCCCGGTGAAACACTCCAGTCCTAGGAGAGAAATGGCCTCTCCTCCCTC  1679

Query  946  --------------------------------------------------------------------------  945
                                                                                      
Sbjct 1680  CTCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGTGGAAGAGGACAGGCAGATGGACACTGAGGCTG  1753

Query  946  --------------------------------------------------------------------------  945
                                                                                      
Sbjct 1754  CTGCATCTGAAGCCTCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTTAGACGGAAGGCAACTGAG  1827

Query  946  ------------------------------------------------------------------  945
                                                                              
Sbjct 1828  CCTCCTCCATCCCAGGAAGGGGAACCTCCAGCTGAGCCCAGCATCTACGCCACTCTGGCCATCCAC  1893

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.