Nucleotide Global Alignment

Description

• Query: TRCN0000479724
• Subject: XM_011547130.2
• Aligned Length: 1415
• Identities: 804
• Gaps: 493

Alignment

Query    1  ATGACCCTCACCCTCTCAGTCCTGATTTGCCTCGGGCTGAGTGTGGGCCCCAGGACCTGCGTGCAGGCAGGCAC  74
            |||||.|.|.|||||.|||.||||.|.|||||.|||||||||.||||||||||||||.|||||||||||||..|
Sbjct    1  ATGACGCCCGCCCTCACAGCCCTGCTCTGCCTTGGGCTGAGTCTGGGCCCCAGGACCCGCGTGCAGGCAGGGCC  74

Query   75  CCTCCCCAAACCCACCCTCTGGGCTGAGCCAGCCTCTGTGAT-AGCTCGGGGGAAGCCCGTGACCCTCTGGTGT  147
            |.||||||||||||||||||||||||||||||.||||||||| |||| ||||||..|||||||||.||||||||
Sbjct   75  CTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCT-GGGGGAGCCCCGTGACCATCTGGTGT  147

Query  148  CAGGGGCCCCTGGAGACTGAGGAGTACCGTCTGGATAAGGAGGGACTCCCATGGGCCC-GGAAGAGACAGAACC  220
            ||||||..|||||||.|..|||||||||..||||||||.||||||..|||| |.|||| ||.|.|||.|.||||
Sbjct  148  CAGGGGAGCCTGGAGGCCCAGGAGTACCAACTGGATAAAGAGGGAAGCCCA-GAGCCCTGGGACAGAAATAACC  220

Query  221  CACTGGAGCCTGGAGC-----CAAGGCCAAGTTCCACATTCCATCCACGGTGTATGACA-------GTGCAGGG  282
            |||||||.||     |     ||||||||..|||..|||.||||||       ||||||       .|||||||
Sbjct  221  CACTGGAACC-----CAAGAACAAGGCCAGATTCTCCATCCCATCC-------ATGACACAGCACCATGCAGGG  282

Query  283  CGATACCGCTGCTACTATGAGACCCCTGCAGGCTGGTCAGAGCCCAGTGACCCCCTGGAGCTGGTGGCGACAGG  356
            .|||||||||||.|||||.|.|.|.||||||||||||||||||||||.||||||||||||||||||..||||||
Sbjct  283  AGATACCGCTGCCACTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGACCCCCTGGAGCTGGTGATGACAGG  356

Query  357  ATTCTATGCA--GAACCCACTCTTTTAGCCCTGCCGAGTCCTGTGGTGGCCTCAGGAGGAAATGTGACCCTCCA  428
            ||||||  ||  .|||||||.||.|.|||||||||.||.|||||||||||||||||.||.|||.|||||||||.
Sbjct  357  ATTCTA--CAACAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTCAGGGGGGAATATGACCCTCCG  428

Query  429  GTGTGATACACTGGACGGACTTCTCAC--GTTTGTTCTTGTTG-AGGA---AGAACAGAAGCTCCCCAGGACCC  496
            .||||...|||.|.|.|||  |.||||  .||||||| ||.|| ||||   ||||||..||||||||.||||||
Sbjct  429  ATGTGGCTCACAGAAGGGA--TATCACCATTTTGTTC-TGATGAAGGAAGGAGAACACCAGCTCCCCCGGACCC  499

Query  497  TGTACTCACAGAAGCTCCCCAAAGGGCCATCCCAGGCCCTGTTCCCTGTGGGTCCCGTGACCCCCAGCTGCAGG  570
            ||.||||||||.||||||.||..|||...|.|||||||||||||||||||||.|||||||||||||||..||||
Sbjct  500  TGGACTCACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGACCCCCAGCCACAGG  573

Query  571  TGGAGGTTCAGATGCTATTACTATTACAGGAAAAACCCTC-AGGTGTGGTCGAACCCCAGTGACCTCCTGGAGA  643
            ||||||||||.|||||||||||||||.| .|||.||||.| .|||||||||..||||||||||||.||||||||
Sbjct  574  TGGAGGTTCACATGCTATTACTATTATA-CAAACACCCCCTGGGTGTGGTCCCACCCCAGTGACCCCCTGGAGA  646

Query  644  TTCTGGTCCCAGGCGTGTCTAGGAAGCCCTCCCTCCTGATCCCGCAGGGCTCTGTCGTGGCCCGCGGAGGC--A  715
            |||||..|.||||||||||||||||||||||||||||||.||.|||||||.|||||.||||||..|  |||  |
Sbjct  647  TTCTGCCCTCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCCTGGCCCCTG--GGCAGA  718

Query  716  GCCTGACCCTGCAGTGTCGCTCTGATGTCGGCTATGACATATTCGTTCTGTACAAGGAGGGGGAACATGACCTC  789
            ||||||||||.||||||.||||||||||||||||.||||.|||.||||||||.|||||||||||||.||||.||
Sbjct  719  GCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAGGGGGAACGTGACTTC  792

Query  790  GTCCAGGGCTCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTC  863
            .|||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct  793  CTCCAGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCCCTC  866

Query  864  CCACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCC-CCTAGGTGGTCGGCCCCCAGCGACCCCCTG  936
            ||||||||||||||||||.|||||.|||||||||||||||||| ||.| |||||||||||||||||||||||||
Sbjct  867  CCACGGGGGCCAGTACAGGTGCTATGGTGCACACAACCTCTCCTCCGA-GTGGTCGGCCCCCAGCGACCCCCTG  939

Query  937  GCCATCC----------AC-------------------------------------------------------  945
            ..|||||          ||                                                       
Sbjct  940  AACATCCTGATGGCAGGACAGATCTATGACACCGTCTCCCTGTCAGCACAGCCGGGCCCCACAGTGGCCTCAGG  1013

Query  946  --------------------------------------------------------------------------  945
                                                                                      
Sbjct 1014  AGAGAACGTGACCCTGCTGTGTCAGTCACGGGGTTATTTTGACACTTTCCTTCTGACCAAAGAAGGGGCAGCCC  1087

Query  946  --------------------------------------------------------------------------  945
                                                                                      
Sbjct 1088  ATCCCCCACTGCGTCTGAGATCAATGTACGGAGCTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGACC  1161

Query  946  --------------------------------------------------------------------------  945
                                                                                      
Sbjct 1162  TCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCACGCAGCTCCAACCCCCACCTGCTGTCTCACCCCAGTGA  1235

Query  946  --------------------------------------------------------------------------  945
                                                                                      
Sbjct 1236  GCCCCTGGAGCTCATGGTCTCAGCCTCACACGCCAAGGATTACACAGTGGAGAATCTCATCCGCATGGGCATGG  1309

Query  946  --------------------------------------------------------------------------  945
                                                                                      
Sbjct 1310  CAGGCTTGGTCCTGGTGTTCCTCGGGATTCTGTTATTTGAGGCTCAGCACAGCCAGAGAAACCCCCAAGATGCA  1383

Query  946  ---------  945
                     
Sbjct 1384  GCCGGGAGG  1392