Nucleotide Global Alignment
Description
- Query:
- TRCN0000479724
- Subject:
- XR_001756785.2
- Aligned Length:
- 2256
- Identities:
- 805
- Gaps:
- 1334
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CACACCCTGTGTGTCTCTCTGTCCTGCCAGCACTGAGGGCTCATCCCTCTGCAGAGCGCGGGGTCACCGGGAGG 74
Query 1 -------ATGACCCTCACCCTCTCAGTCCTGATTTGCCTCGGGCTGAGTGTGGGCCCCAGGACCTGCGTGCAGG 67
|||||.|.|.|||||.|||.||||.|.|||||.|||||||||.||||||||||||||.|||||||||
Sbjct 75 AGACGCCATGACGCCCGCCCTCACAGCCCTGCTCTGCCTTGGGCTGAGTCTGGGCCCCAGGACCCGCGTGCAGG 148
Query 68 CAGGCACCCTCCCCAAACCCACCCTCTGGGCTGAGCCAGCCTCTGTGAT-AGCTCGGGGGAAGCCCGTGACCCT 140
||||..||.||||||||||||||||||||||||||||||.||||||||| |||| ||||||..|||||||||.|
Sbjct 149 CAGGGCCCTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCT-GGGGGAGCCCCGTGACCAT 221
Query 141 CTGGTGTCAGGGGCCCCTGGAGACTGAGGAGTACCGTCTGGATAAGGAGGGACTCCCATGGGCCC--GGAAGAG 212
|||||||||||||..|||||||.|..||||||||||.||||||||.||||||..|||| |.|||| || |.||
Sbjct 222 CTGGTGTCAGGGGAGCCTGGAGGCCCAGGAGTACCGACTGGATAAAGAGGGAAGCCCA-GAGCCCTTGG-ACAG 293
Query 213 ACAGAACCCACTGGAGCCTGGAGC-----CAAGGCCAAGTTCCACATTCCATCCACGGTGTATGACAG------ 275
|.|.|||||||||||.|| | ||||||||..|||..|||.|||||| |||||||
Sbjct 294 AAATAACCCACTGGAACC-----CAAGAACAAGGCCAGATTCTCCATCCCATCC-------ATGACAGAGCACC 355
Query 276 -TGCAGGGCGATACCGCTGCTACTATGAGACCCCTGCAGGCTGGTCAGAGCCCAGTGACCCCCTGGAGCTGGTG 348
|||.|||.|||||||||||.|||||.|.|.|.||||||||||||||||||||||.||||||||||||||||||
Sbjct 356 ATGCGGGGAGATACCGCTGCCACTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGACCCCCTGGAGCTGGTG 429
Query 349 GCGACAGGATTCTATGCA--GAACCCACTCTTTTAGCCCTGCCGAGTCCTGTGGTGGCCTCAGGAGGAAATGTG 420
..|||||||||||| || .|||||||.||.|.|||||||||.||.|||||||||||||||||.||.|||.||
Sbjct 430 ATGACAGGATTCTA--CAACAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTCAGGGGGGAATATG 501
Query 421 ACCCTCCAGTGTGATACACTGGACGGACTTCTCAC--GTTTGTTCTTGTTG-AGGA---AGAACAGAAGCTCCC 488
|||||||..||||...|||.|.|.||| |.|||| .||||||| ||.|| |||| ||||||..|||||||
Sbjct 502 ACCCTCCGATGTGGCTCACAGAAGGGA--TATCACCATTTTGTTC-TGATGAAGGAAGGAGAACACCAGCTCCC 572
Query 489 CAGGACCCTGTACTCACAGAAGCTCCCCAAAGGGCCATCCCAGGCCCTGTTCCCTGTGGGTCCCGTGACCCCCA 562
|.||||||||.||||||||.||||||.||..|||...|.|||||||||||||||||||||.|||||||.|||||
Sbjct 573 CCGGACCCTGGACTCACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGAACCCCA 646
Query 563 GCTGCAGGTGGAGGTTCAGATGCTATTACTATTACAGGAAAAACCCTCAGGTGTGGTCGAACCCCAGTGACCTC 636
||..||||||||||||||.|||||||||||||||.|.|||.|.|||.|||||||||||..||||||||||||.|
Sbjct 647 GCCACAGGTGGAGGTTCACATGCTATTACTATTATATGAACACCCCCCAGGTGTGGTCCCACCCCAGTGACCCC 720
Query 637 CTGGAGATTCTGGTCCCAGGCGTGTCTAGGAAGCCCTCCCTCCTGATCCCGCAGGGCTCTGTCGTGGCCCGCGG 710
||||||||||||..|.||||||||||||||||||||||||||||||.||.|||||||.|||||.||||||..|
Sbjct 721 CTGGAGATTCTGCCCTCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCCTGGCCCCTG- 793
Query 711 AGGC--AGCCTGACCCTGCAGTGTCGCTCTGATGTCGGCTATGACATATTCGTTCTGTACAAGGAGGGGGAACA 782
||| |||||||||||.||||||.||||||||||||||||.||||.|||.||||||||.|||||||||||||.
Sbjct 794 -GGCAGAGCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAGGGGGAACG 866
Query 783 TGACCTCGTCCAGGGCTCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGA 856
||||.||.|||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 867 TGACTTCCTCCAGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGA 940
Query 857 GCCGCTCCCACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCC-CCTAGGTGGTCGGCCCCCAGCGA 929
|||.|||||||||||||||||||||.|||||.|||||||||||||||||| ||.| ||||||||||||||||||
Sbjct 941 GCCCCTCCCACGGGGGCCAGTACAGGTGCTATGGTGCACACAACCTCTCCTCCGA-GTGGTCGGCCCCCAGCGA 1013
Query 930 CCCCCTGGCCATCC----------AC------------------------------------------------ 945
|||||||..||||| ||
Sbjct 1014 CCCCCTGAACATCCTGATGGCAGGACAGATCTATGACACCGTCTCCCTGTCAGCACAGCCGGGCCCCACAGTGG 1087
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1088 CCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCATGGTGGCAGTTTGACACTTTCCTTCTGACCAAAGAAGGG 1161
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1162 GCAGCCCATCCCCCACTGCGTCTGAGATCAATGTACGGAGCTCATAAGTACCAGGCTGAATTCCCCATGAGTCC 1235
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1236 TGTGACCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCATACAGCTCCAACCCCCACCTGCTGTCTTTCC 1309
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1310 CCAGTGAGCCCCTGGAACTCATGGTCTCAGGACACTCTGGAGGCTCCAGCCTCCCACCCACAGGGCCGCCCTCC 1383
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1384 ACACCTGGTCTGGGAAGATACCTGGAGGTTTTGATTGGGGTCTCGGTGGCCTTCGTCCTGCTGCTCTTCCTCCT 1457
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1458 CCTCTTCCTCCTCCTCCGACGTCAGCGTCACAGCAAACACAGGACATCTGGGCTGAGACTCTGTCCATCTTCAC 1531
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1532 CCAGACCAGAGAAAGACTGATTTCCAGCGTCCTGCAGGGGCTGCGGAGACAGAGCCCAAGGACAGGGGCCTGCT 1605
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1606 GAGGAGGTCCAGCCCAGCTGCTGACGTCCAGGAAGAAAACCTCTATGCTGCCGTGAAGGACACACAGTCTGAGG 1679
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1680 ACAGGGTGGAGCTGGACAGTCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCCCGGTGAAACAC 1753
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1754 TCCAGTCCTAGGAGAGAAATGGCCTCTCCTCCCTCCTCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACA 1827
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1828 GGTGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGCCTCCCAGGATGTGACCTACGCCCAGC 1901
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1902 TGCACAGCTTGACCCTTAGACGGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGAACCTCCAGCTGAGCCC 1975
Query 946 -------------------------------------------------------------------------- 945
Sbjct 1976 AGCATCTACGCCACTCTGGCCATCCACTAGCCCGGGGGGTACGCAGACCCCACACTCAGCAGAAGGAGACTCAG 2049
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2050 GACTGCTGAAGGCACGGGAGCTGCCCCCAGTGGACACCAGTGAACCCCAGTCAGCCTGGACCCCTAACACAGAC 2123
Query 946 -------------------------------------------------------------------------- 945
Sbjct 2124 CATGAGGAGACGCTGGGAACTTGTGGGACTCACCTGACTCAAAGATGACTAATATCGTCCCATTTTGGAAATAA 2197
Query 946 ------------------------------------ 945
Sbjct 2198 AGCAACAGACTTCTCAACAATCAATGAGTTAATAAC 2233
