Nucleotide Global Alignment
Description
- Query:
- TRCN0000479743
- Subject:
- NM_008985.2
- Aligned Length:
- 2950
- Identities:
- 1579
- Gaps:
- 1184
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGCGCCCGCGGCGGCCCGGGGGCTCCGGGGGCTCCGGGGGCTCCGGGGGCCTCCGGCTGCTGGTCTGCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTGTTGCTGAGCGGCCGCCCCGGGGGCTGCAGCGCCATCAGTGCCCACGGCTGTCTGTTTGACCGCAGACTTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTTCGCATCTGGAAGTCTGTATTCAGGATGGCTTGTTTGGACAGTGCCAGGCAGGAGTGGGGCAGGCACGGCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCTTACAAGTCACTTCCCCAGTTCTCCAGCGCCTACAAGGTGTGCTCCGGCAACTCATGTCCCAAGGCTTGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGGCATGATGACCTTACCCAGCATGTGATCTCCCAGGAGATGGAACGCATCCCCAGGCTTCGCCCCCCAGAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCATCCAAGGGACAGGTCTGGTTTGGTGCCCAGGAAACCAGGCCCTGCAGGGGAATTGCTAACTCAGGGCAAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCTACTGGCTCCTCTCCTGCTGCCCAGGGCTTTCCAAGGCCTGCAGGGGGTGGGGACGGAGCTGGGGCGGGCTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCCACTGTCCTCTCTGCAGGCTGAGTTGTTACCCCCTCTCTTGGAGCATCTGCTAATGCCCCCACAGCCTCCAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACCCTGCTCTGACCTATGAACCTGCACTGCTACAGCCTTACCTCTTCCACCAGTTTGGCTCCCGAGATGGCTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGGGGCTCAGAGAGCTCCTCTGGGGTAGTTGGTGTTGGTCACCTGTCCAAGGCTGAAGGTCCTGCACTCTTCAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGAAGTGCCTCCAAGGCCATTTTGGGGACTCACTCTGGACACTCTTTTGGGGACCTTACAGGTCCCTCACCTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCAACTTTTCCAAGATTCAGGGCTGCTCTACATGGCCCAAGAGTTGCCAGTGCCTGGCAGAGCCCGGGCACCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGGTTGCCAGAGAATGGGGGCAACAGGGCAGAGGACTCTTCAGAGGGCCATGAGGAGGAAGTACTAGGGGGTCG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGGGGAGAAGTCCCCTCCCCAAGCAGCACAACCAGAATTGAGTCTGCAGAGATTGACTGCTGTACTGGCAGGCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGGAGTAGAGCTGCGTCAGTTGACCCCGGAGCAGTTTTCTACCCTCTTGACCCTGCTGCAGTTGCTGCCCAAG 1110
Query 1 ----------------------------------ATGGAGGGGCCGGTG------------------------- 15
.||||||.||||.||
Sbjct 1111 GGCACAGGAAGAAATCTTGAAGGGGCTGTAAATGTTGGAGGAGCCGATGTCAAGAAAACAATACAACAGATGCA 1184
Query 16 GAGGGCAGAGACACAGCAG-AGCTTCCAG-CCCGCACATCCCCCATGCCTGGACACCCCACTGCCAGCCCTACC 87
|||.| |||||.|||||| |||| |.| |||.||||.||.|..|.|||||..|||.|||||||||||||.||
Sbjct 1185 GAGAG--GAGACCCAGCAGAAGCT--CTGCCCCCCACACCCTCGCTTCCTGGGTACCTCACTGCCAGCCCTGCC 1254
Query 88 TCCAGTGAAGTCCAGCAGGTGCCAAGCCCT-GTCTCCTCTGAGCCTCCCAAAGCTGCCAGACCCCCTGTGACAC 160
|||||.|||||.||||||||||..|||||| ||.||| ||||.||||||.|..|..|||| |||.||| |.|.|
Sbjct 1255 TCCAGCGAAGTTCAGCAGGTGCTGAGCCCTGGTTTCC-CTGAACCTCCCCACACACCCAG-CCCTCTG-GGCTC 1325
Query 161 CT-----GTCCTGCTAGAGAAGAAAAGCCCACTGGGCCAGAGCCAGCCCACGGTGGCAGGACAGCCCTCAGCCC 229
|| |||||.||.|||||||||||.||..|||||||||||||||||||.||||..||||.|||.|||||.|
Sbjct 1326 CTCCTCAGTCCTTCTGGAGAAGAAAAGTCCCTTGGGCCAGAGCCAGCCCACAGTGGTGGGACGGCCATCAGCTC 1399
Query 230 GCCCAGCAGCAGAGGAATATGGCTACATCGTCACTGATCAGAAGCCCCTGAGCCTGGCTGCAGGAGTGAAGCTG 303
|.|||.|.||.|||||.||||||||.|||||||||||.|||||.|||||||||||||..||.|||||||.||||
Sbjct 1400 GACCATCGGCCGAGGAGTATGGCTATATCGTCACTGACCAGAAACCCCTGAGCCTGGTGGCTGGAGTGAGGCTG 1473
Query 304 CTGGAGATCCTGGCTGAGCATGTGCACATGTCCTCAGGCAGCTTCATCAACATCAGTGTGGTGGGACCAGCCCT 377
||||||||.|||||||||||.|||||.||||||||.||.|||||.||||||||||||||||||||||||||..|
Sbjct 1474 CTGGAGATTCTGGCTGAGCACGTGCATATGTCCTCCGGTAGCTTTATCAACATCAGTGTGGTGGGACCAGCTGT 1547
Query 378 CACCTTCCGCATCCGGCACAATGAGCAGAACCTGTCTTTGGCTGATGTGACCCAACAAGCAGGGCTGGTGAAGT 451
|||||||||.||||||||||||||||||||||||||||||||.|||||||||||.|||||.|||||||||||||
Sbjct 1548 CACCTTCCGAATCCGGCACAATGAGCAGAACCTGTCTTTGGCAGATGTGACCCAGCAAGCTGGGCTGGTGAAGT 1621
Query 452 CTGAACTGGAAGCACAGACAGGGCTCCAAATCTTGCAGACAGGAGTGGGACAGAGGGAGGAGGCAGCTGCAGTC 525
|||||||||||||.||||||||||||||.||.|||||||||||.|||||||||||||||||.|||||||.||||
Sbjct 1622 CTGAACTGGAAGCGCAGACAGGGCTCCAGATTTTGCAGACAGGGGTGGGACAGAGGGAGGAAGCAGCTGAAGTC 1695
Query 526 CTTCCCCAAACTGCGCACAGCACCTCACCCATGCGCTCAGTGCTGCTCACTCTGGTGGCCCTGGCAGGTGTGGC 599
|||||||.|...||.||..|||..||.||||||||||||||||||||.|||||.||||||||||||||.||.||
Sbjct 1696 CTTCCCCGACAAGCCCATGGCATATCTCCCATGCGCTCAGTGCTGCTTACTCTAGTGGCCCTGGCAGGCGTCGC 1769
Query 600 TGGGCTGCTGGTGGCTCTGGCTGTGGCTCTGTGTGTGCGGCAGCATGCGCGGCAGCAAGACAAGGAGCGCCTGG 673
|||||||||.||||||.||||.|||||..|||||.||||.||.|||.||.|.||||..||.|||||||||||||
Sbjct 1770 TGGGCTGCTAGTGGCTTTGGCAGTGGCCTTGTGTATGCGCCATCATTCGAGACAGCGGGATAAGGAGCGCCTGG 1843
Query 674 CAGCCCTGGGGCCTGAGGGGGCCCATGGTGACACTACCTTTGAGTACCAGGACCTGTGCCGCCAGCACATGGCC 747
||||.||||||||.|||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||
Sbjct 1844 CAGCGCTGGGGCCGGAGGGGGCCCATGGTGACACTACTTTTGAGTACCAGGACCTGTGTCGCCAGCACATGGCC 1917
Query 748 ACGAAGTCCTTGTTCAACCGGGCAGAGGGTCCACCGGAGCCTTCACGGGTGAGCAGTGTGTCCTCCCAGTTCAG 821
||.||||||.||||.||||||||.|||||||..||.||||||||..||||||||||||||||||||||||||||
Sbjct 1918 ACAAAGTCCCTGTTTAACCGGGCGGAGGGTCAGCCAGAGCCTTCTAGGGTGAGCAGTGTGTCCTCCCAGTTCAG 1991
Query 822 CGACGCAGCCCAGGCCAGCCCCAGCTCCCACAGCAGCACCCCGTCCTGGTGCGAGGAGCCGGCCCAAGCCAACA 895
||||||.|||||||||||||||||.||||||||||||||.||.||.||||||||||||||.|||||.|||||||
Sbjct 1992 CGACGCGGCCCAGGCCAGCCCCAGTTCCCACAGCAGCACACCATCTTGGTGCGAGGAGCCCGCCCAGGCCAACA 2065
Query 896 TGGACATCTCCACGGGACACATGATTCTGGCATACATGGAGGATCACCTGCGGAACCGGGACCGCCTTGCCAAG 969
|||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||..|.||||||
Sbjct 2066 TGGACATCTCCACAGGACACATGATTCTGGCATACATGGAGGATCACCTTCGGAACCGGGACCGGTTGGCCAAG 2139
Query 970 GAGTGGCAGGCCCTCTGTGCCTACCAAGCAGAGCCAAACACCTGTGCCACCGCGCAGGGGGAGGGCAACATCAA 1043
|||||||||||.||.||.||||||||||||||||||||||||||||||.||||.||||..|||.||||||||||
Sbjct 2140 GAGTGGCAGGCTCTGTGCGCCTACCAAGCAGAGCCAAACACCTGTGCCGCCGCACAGGATGAGAGCAACATCAA 2213
Query 1044 AAAGAACCGGCATCCTGACTTCCTGCCCTATGACCATGCCCGCATAAAACTGAAGGTGGAGAGCAGCCCTTCTC 1117
.||||||||.||||||||||||||.|||||||||||||||||.||.||.|||||.|||||||||||||||||||
Sbjct 2214 GAAGAACCGCCATCCTGACTTCCTACCCTATGACCATGCCCGAATCAAGCTGAAAGTGGAGAGCAGCCCTTCTC 2287
Query 1118 GGAGCGATTACATCAACGCCAGCCCCATTATTGAGCATGACCCTCGGATGCCAGCCTACATAGCCACGCAGGGC 1191
||||.|||||||||||||||||||||||.||.||||||||||||||||||||.||||||||||||||.|||||.
Sbjct 2288 GGAGTGATTACATCAACGCCAGCCCCATCATCGAGCATGACCCTCGGATGCCGGCCTACATAGCCACACAGGGA 2361
Query 1192 CCGCTGTCCCATACCATCGCAGACTTCTGGCAGATGGTGTGGGAGAGCGGCTGCACCGTCATCGTCATGCTGAC 1265
||.||||||||.||||||||.||||||||||||||||||||||||||.||||||||.||||||||.||||||||
Sbjct 2362 CCACTGTCCCACACCATCGCGGACTTCTGGCAGATGGTGTGGGAGAGTGGCTGCACTGTCATCGTTATGCTGAC 2435
Query 1266 CCCGCTGGTGGAGGATGGTGTCAAGCAGTGTGACCGCTACTGGCCAGATGAGGGTGCCTCCCTCTACCACGTAT 1339
||||.||||||||||.||||||||.||||||||||||||||||||.|||||.||..|.||||||||||||||.|
Sbjct 2436 CCCGTTGGTGGAGGACGGTGTCAAACAGTGTGACCGCTACTGGCCGGATGAAGGATCTTCCCTCTACCACGTCT 2509
Query 1340 ATGAGGTGAACCTGGTGTCGGAGCACATCTGGTGCGAGGACTTTCTGGTGCGGAGCTTCTACCTGAAGAACGTG 1413
|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||.||
Sbjct 2510 ATGAGGTGAACCTGGTGTCGGAGCACATCTGGTGCGAGGACTTCCTGGTGCGGAGCTTCTACCTTAAGAACCTG 2583
Query 1414 CAGACCCAGGAGACGCGCACGCTCACGCAGTTCCACTTCCTCAGCTGGCCGGCAGAGGGCACACCGGCCTCCAC 1487
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 2584 CAGACCCAGGAGACGCGCACGCTCACTCAGTTCCACTTCCTCAGCTGGCCGGCAGAGGGCACTCCGGCCTCCAC 2657
Query 1488 GCGGCCCCTGCTGGACTTCCGCAGGAAGGTGAACAAGTGCTACCGGGGCCGCTCCTGCCCCATCATCGTGCACT 1561
.|||||.||||||||||||||||||||.|||||||||||||||.|.||||||||||||||||||||.|||||||
Sbjct 2658 CCGGCCGCTGCTGGACTTCCGCAGGAAAGTGAACAAGTGCTACAGAGGCCGCTCCTGCCCCATCATAGTGCACT 2731
Query 1562 GCAGTGATGGTGCGGGGAGGACCGGCACCTACATCCTCATCGACATGGTCCTGAACCGCATGGCAAAAGGAGTG 1635
|||||||.|||||.||||||||.||||||||||||||.||.||||||||||||||.||||||||.|||||||||
Sbjct 2732 GCAGTGACGGTGCAGGGAGGACAGGCACCTACATCCTTATTGACATGGTCCTGAATCGCATGGCCAAAGGAGTG 2805
Query 1636 AAGGAGATTGACATCGCTGCCACCCTGGAGCATGTCCGTGACCAGCGGCCTGGCCTTGTCCGCTCTAAGGACCA 1709
|||||||||||.||.||||||||||||||||||||||||||||||||||||||.||||||||.|||||||||||
Sbjct 2806 AAGGAGATTGATATTGCTGCCACCCTGGAGCATGTCCGTGACCAGCGGCCTGGACTTGTCCGTTCTAAGGACCA 2879
Query 1710 GTTTGAATTTGCCCTGACAGCCGTGGCGGAGGAAGTGAATGCCATCCTCAAGGCCCTGCCCCAG 1773
||||||.|||||.||||||||||||||.|||||.||||||||.|||||||||||||||||||||
Sbjct 2880 GTTTGAGTTTGCGCTGACAGCCGTGGCAGAGGAGGTGAATGCTATCCTCAAGGCCCTGCCCCAG 2943
