Nucleotide Global Alignment

Description

Query:
TRCN0000479746
Subject:
NR_161419.1
Aligned Length:
2387
Identities:
1605
Gaps:
752

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCTTACTGCTACAGCAGGGCTGGGGATTGCAGTATCCGCTGTTGCTGCTGCTCCCAGTCCTGCCCCTGCTGCT  74

Query    1  --------------------ATGGCTGAAGCGGCCACG--GGCTTTC----------TGG---------AGCAG  33
                                ||..|.||||.|| ||||  |||.|||          |||         |||||
Sbjct   75  ACCTAGTCCAGCCTCACCGCATCCCAGAAGAGG-CACGTCGGCCTTCATTTGCCTAGTGGATTTTCAAAAGCAG  147

Query   34  CTC-------------------AAG---TCCTGCAT-------------------------AGTTTG-------  53
            |||                   |||   .|.|||||                         ||.|.|       
Sbjct  148  CTCTTCGGTTTTTGGTGCTGTTAAGAGACCTTGCATTTCAATCACACCGGGAGAAAACTGAAGCTCGTAACAGG  221

Query   54  ---GTCT------TGGACGTATCTGTGGAC-----CGTGTGGTTCTTCAT----CGTGCTAT---TCCTGGTC-  105
               .|||      |||||..|.|| |||||     .||.|||  ||||||    |.||||.|   .||.|.|| 
Sbjct  222  AGAATCTGGCAGCTGGACACAGCT-TGGACTGCATTGTCTGG--CTTCATGACCCCTGCTGTGTAGCCGGCTCA  292

Query  106  ------------------TACA---TCCTGCGGGTGCC----------------------------------TT  124
                              ||||   |||| ||..|..|                                  ||
Sbjct  293  TCTCTTCACTCTCACATGTACACTCTCCT-CGCTTTTCTTTCTTTTTTTTTTCCCTTTTCTTTCTTCTAATTTT  365

Query  125  TGAAAATCAAC-------GACAAC-----TTGAGCA---------CAGTGAGCATGTTTTTGAACACATTAACA  177
            |.||||.||.|       |.||.|     ||| |||         ||.||||||||||||||||||||||||||
Sbjct  366  TAAAAAGCAGCCTCTGGAGCCAGCCATGTTTG-GCACTGAATCTTCATTGAGCATGTTTTTGAACACATTAACA  438

Query  178  CCGAAGTTCTACGTGGCCCTAACAGGCACTTCCTCACTAATATCAGGGCTTATTTTGATATTTGAATGGTGGTA  251
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  439  CCGAAGTTCTACGTGGCCCTAACAGGCACTTCCTCACTAATATCAGGGCTTATTTTGATATTTGAATGGTGGTA  512

Query  252  TTTTCGCAAATACGGAACTTCATTCATTGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCTGGGAGGGGTTG  325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  513  TTTTCGCAAATACGGAACTTCATTCATTGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCTGGGAGGGGTTG  586

Query  326  ACAACAACTCTTCCAACA---------------------ACTCAGATTCCAATAGGCAAAGTGTCTCAGAATGC  378
            ||||||||||||||||||                     |||||||||||||||||||||||||||||||||||
Sbjct  587  ACAACAACTCTTCCAACAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATGC  660

Query  379  AAAGTATGGCGAAATCCACTAAATTTATTTAGGGGTGCTGAATACAATCGGTATACTTGGGTGACAGGACGAGA  452
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  661  AAAGTATGGCGAAATCCACTAAATTTATTTAGGGGTGCTGAATACAATCGGTATACTTGGGTGACAGGACGAGA  734

Query  453  GCCTCTTACTTACTATGACATGAATCTCTCTGCCCAAGACCACCAGACATTCTTTACTTGTGACTCGGACCATC  526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  735  GCCTCTTACTTACTATGACATGAATCTCTCTGCCCAAGACCACCAGACATTCTTTACTTGTGACTCGGACCATC  808

Query  527  TGCGTCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCAT  600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  809  TGCGTCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCAT  882

Query  601  GAAGCCTTGGAGATAAATGAGTGTGCAACTGCTTATATTCTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGA  674
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  883  GAAGCCTTGGAGATAAATGAGTGTGCAACTGCTTATATTCTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGA  956

Query  675  AGCAGAAAAATTATTTAAGCAGGCCCTGAAGGCTGGAGATGGCTGTTACCGACGCTCTCAGCAGCTACAACATC  748
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  957  AGCAGAAAAATTATTTAAGCAGGCCCTGAAGGCTGGAGATGGCTGTTACCGACGCTCTCAGCAGCTACAACATC  1030

Query  749  ATGGATCCCAGTATGAAGCCCAACATAGACGAGACACCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAATG  822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031  ATGGATCCCAGTATGAAGCCCAACATAGACGAGACACCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAATG  1104

Query  823  TGTGCCAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGAGATTTAATGAAGGAGTTCCCCCTTCT  896
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105  TGTGCCAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGAGATTTAATGAAGGAGTTCCCCCTTCT  1178

Query  897  GAGTATGTTCAATATCCATGAAAACCTTTTAGAAGCCCTTCTGGAACTACAAGCATATGCTGATGTTCAGGCAG  970
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1179  GAGTATGTTCAATATCCATGAAAACCTTTTAGAAGCCCTTCTGGAACTACAAGCATATGCTGATGTTCAGGCAG  1252

Query  971  TCTTAGCAAAGTATGATGATATAAGCTTACCAAAGTCAGCAACAATATGCTACACAGCTGCTTTGCTCAAAGCA  1044
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1253  TCTTAGCAAAGTATGATGATATAAGCTTACCAAAGTCAGCAACAATATGCTACACAGCTGCTTTGCTCAAAGCA  1326

Query 1045  AGAGCTGTCTCTGACAA---------------------------------------------------------  1061
            |||||||||||||||||                                                         
Sbjct 1327  AGAGCTGTCTCTGACAAATCGCCAGTACCTACTGCAACATCTTTTCTCCCTACACAGCGACTCCAGCTTGGGAG  1400

Query 1062  --------------------------------------------------------------------------  1061
                                                                                      
Sbjct 1401  GGCAGGGCCAGGGTTGTCACAGCTTCCCCTGTGGTGTCTGCCTGCCAAGCACAGCTCTGGAGTTAGCCCTGGGT  1474

Query 1062  -----ATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTAGAGGCCATTCA  1130
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1475  GTGAGATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTAGAGGCCATTCA  1548

Query 1131  TAGAGCTGTGGAATTCAATCCTCATGTGCCAAAATACCTACTAGAAATGAAAAGCTTAATCCTACCCCCAGAAC  1204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1549  TAGAGCTGTGGAATTCAATCCTCATGTGCCAAAATACCTACTAGAAATGAAAAGCTTAATCCTACCCCCAGAAC  1622

Query 1205  ATATCCTGAAGAGAGGAGACAGTGAAGCAATAGCATATGCATTCTTTCATCTTGCACACTGGAAGAGAGTGGAA  1278
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1623  ATATCCTGAAGAGAGGAGACAGTGAAGCAATAGCATATGCATTCTTTCATCTTGCACACTGGAAGAGAGTGGAA  1696

Query 1279  GGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGCACTTTTCGGATGATCCCTTATCCCTTGGAAAAGGGGCA  1352
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1697  GGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGCACTTTTCGGATGATCCCTTATCCCTTGGAAAAGGGGCA  1770

Query 1353  CCTATTTTATCCTTACCCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTCTCAG  1426
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1771  CCTATTTTATCCTTACCCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTCTCAG  1844

Query 1427  TTTACCCAAAGAAGGAGCTTCCCTTCTTTATTCTCTTTACTGCTGGATTATGTTCCTTCACAGCCATGCTGGCC  1500
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1845  TTTACCCAAAGAAGGAGCTTCCCTTCTTTATTCTCTTTACTGCTGGATTATGTTCCTTCACAGCCATGCTGGCC  1918

Query 1501  CTCCTGACACATCAGTTCCCGGAACTTATGGGGGTCTTCGCAAAAGCTTTCCTCAGCACTTTGTTTGCCCCCTT  1574
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1919  CTCCTGACACATCAGTTCCCGGAACTTATGGGGGTCTTCGCAAAAGCTTTCCTCAGCACTTTGTTTGCCCCCTT  1992

Query 1575  AAACTTTGTCATGGAGAAAGTGGAGAGCATCCTCCCATCCAGTCTGTGGCACCAGCTAACACGGATC-------  1641
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
Sbjct 1993  AAACTTTGTCATGGAGAAAGTGGAGAGCATCCTCCCATCCAGTCTGTGGCACCAGCTAACACGGATCTGAGAGA  2066

Query 1642  --------------------------------------------------------------------------  1641
                                                                                      
Sbjct 2067  AGCCCTGTCCTCCACTCACCTCACCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAA  2140

Query 1642  --------------------------------------------------------------------------  1641
                                                                                      
Sbjct 2141  AGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAAAATGTTCATGGACTATTCCATATTAAAAGCTGTT  2214

Query 1642  --------------------------------------------------------------------------  1641
                                                                                      
Sbjct 2215  TTTGTTGTACAAAATTCACTGATGTTCAGTTCTATTTTATTTTGCCTTCAGAAAAGAAGAAAGTCAAAAATAAA  2288

Query 1642  --------------------------------------------------------------------------  1641
                                                                                      
Sbjct 2289  ACTTTTGTGTATTACAGCAATCATTTGTATCCTCCTGTGTCTTCCAACCCTAAAATTGTTGATGTCCCAAATAA  2362

Query 1642  -------------------  1641
                               
Sbjct 2363  ACCTTTGGATTTACCTTGA  2381

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