Nucleotide Global Alignment
Description
- Query:
- TRCN0000479800
- Subject:
- NM_001159593.1
- Aligned Length:
- 2070
- Identities:
- 625
- Gaps:
- 1368
Alignment
Query 1 ------------ATGGCAACGCTGATTACCAGTACTACAGCTGCTACCGCCGCTTCTGGTCC-------TTTGG 55
.||||||| ||||||.|||||...|||||||....|.|||||.|.||| |.|
Sbjct 1 ATGGAATCTACTGTGGCAAC---GATTACTAGTACCCTAGCTGCTGTTACTGCTTCCGCTCCACCGAAGTAT-- 69
Query 56 TGGACTACCTATGGATGCTCATCCTGGGCTTCATTATTGCATTTGTCTTGGCATTCTCCGTGGGAGCCAATGAT 129
|||.|.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 70 --GACAATCTATGGATGCTCATCCTGGGCTTCATCATTGCATTTGTCTTGGCATTCTCCGTGGGAGCCAATGAT 141
Query 130 GTAGCAAATTCTTTTGGTACAGCTGTGGGCTCAGGTGTAGTGACCCTGAAGCAAGCCTGCATCCTAGCTAGCAT 203
|||||||||||.||.|||||||||||.||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 142 GTAGCAAATTCGTTCGGTACAGCTGTAGGCTCAGGTGTAGTGACCCTGAAGCAAGCCTGCATCTTAGCTAGCAT 215
Query 204 CTTTGAAACAGTGGGCTCTGTCTTACTGGGGGCCAAAGTGAGCGAAACCATCCGGAAGGGCTTGATTGACGTGG 277
|||.|||||.||||||||.|.|||.||||||||||||||||||||||||||||||||.||||||||.||.||||
Sbjct 216 CTTCGAAACTGTGGGCTCCGCCTTGCTGGGGGCCAAAGTGAGCGAAACCATCCGGAACGGCTTGATAGATGTGG 289
Query 278 AGATGTACAACTCGACTCAAGGGCTACTGATGGCCGGCTCAGTCAGTGCTATGTTTGGTTCTGCTGTGTGGCAA 351
||.||||||||...|||||||..||.||.|||||.|||||.||||||||||||||||||||||||||||||||.
Sbjct 290 AGCTGTACAACGAAACTCAAGATCTGCTCATGGCTGGCTCCGTCAGTGCTATGTTTGGTTCTGCTGTGTGGCAG 363
Query 352 CTCGTGGCTTCGTTTTTGAAGCTCCCTATTTCTGGAACCCATTGTATTGTTGGTGCAACTATTGGTTTCTCCCT 425
|||||||||||||||||||||||.||.||||||||.||||||||||||||.||||||||.||||||||||||||
Sbjct 364 CTCGTGGCTTCGTTTTTGAAGCTTCCGATTTCTGGGACCCATTGTATTGTCGGTGCAACCATTGGTTTCTCCCT 437
Query 426 CGTGGCAAAGGGGCAGGAGGGTGTCAAGTGGTCTGAACTGATAAAAATTGTGATGTCTTGGTTCGTGTCCCCAC 499
.||||||||.||||||.||||||||||||||||||||||||||||||||||||||||.||||||||.||.||.|
Sbjct 438 TGTGGCAAATGGGCAGAAGGGTGTCAAGTGGTCTGAACTGATAAAAATTGTGATGTCGTGGTTCGTCTCTCCGC 511
Query 500 TGCTTTCTGGAATTATGTCTGGAATTTTATTCTTCCTGGTTCGTGCATTCATCCTCCATAAGGCAGATCCAGTT 573
||||||||||.||||||||||||||||||||||||||.||||||||.||||||||||.||||||||||||.|||
Sbjct 512 TGCTTTCTGGTATTATGTCTGGAATTTTATTCTTCCTTGTTCGTGCGTTCATCCTCCGTAAGGCAGATCCGGTT 585
Query 574 CCTAATGGTTTGCGAGCTTTGCCAGTTTTCTATGCCTGCACAGTTGGAATAAACCTCTTTTCCATCATGTATAC 647
||||||||.||.||||||||.|||.||||.||||||||||||.|.|||||.||||||||||||||.||||||||
Sbjct 586 CCTAATGGCTTACGAGCTTTACCAATTTTTTATGCCTGCACAATCGGAATCAACCTCTTTTCCATTATGTATAC 659
Query 648 TGGAGCACCGTTGCTGGGCTTTGACAAACTTCCT---------CTG---TGGGGTACCATCCTCATCTCGGTGG 709
|||||||||||.|||| |||..|||| ||| || |||| |||.||.|..|
Sbjct 660 TGGAGCACCGTGGCTG---------AAATCTCCTAGAAGGTGGCTGGCCTG------CATC--CATTTCAGAAG 716
Query 710 GATGTGCAG--TTTTCTGTGCCCTTATCGTCTGGTTCTTTGTATGTCCCAGGATGAAGAGAAAAATTGAACGAG 781
| .||||| |..|.|.|||
Sbjct 717 G--CTGCAGGCTAGTGTATGC----------------------------------------------------- 735
Query 782 AAATAAAGTGTAGTCCTTCTGAAAGCCCCTTAATGGAAAAAAAGAATAGCTTGAAAGAAGACCATGAAGAAACA 855
Sbjct 736 -------------------------------------------------------------------------- 735
Query 856 AAGTTGTCTGTTGGTGATATTGAAAACAAGCATCCTGTTTCTGAGGTAGGGCCTGCCACTGTGCCCCTCCAGGC 929
Sbjct 736 -------------------------------------------------------------------------- 735
Query 930 TGTGGTGGAGGAGAGAACAGTCTCATTCAAACTTGGAGATTTGGAGGAAGCTCCAGAGAGAGAGAGGCTTCCCA 1003
Sbjct 736 -------------------------------------------------------------------------- 735
Query 1004 GCGTGGACTTGAAAGAGGAAACCAGCATAGATAGCACCGTGAATGGTGCAGTGCAGTTGCCTAATGGGAACCTT 1077
Sbjct 736 -------------------------------------------------------------------------- 735
Query 1078 GTCCAGTTCAGTCAAGCCGTCAGCAACCAAATAAACTCCAGTGGCCACTACCAGTATCACACCGTGCATAAGGA 1151
Sbjct 736 -------------------------------------------------------------------------- 735
Query 1152 TTCCGGCCTGTACAAAGAGCTACTCCATAAATTACATCTTGCCAAGGTGGGAGATTGCATGGGAGACTCCGGTG 1225
Sbjct 736 -------------------------------------------------------------------------- 735
Query 1226 ACAAACCCTTAAGGCGCAATAATAGCTATACTTCCTATACCATGGCAATATGTGGCATGCCTCTGGATTCATTC 1299
Sbjct 736 -------------------------------------------------------------------------- 735
Query 1300 CGTGCCAAAGAAGGTGAACAGAAGGGCGAAGAAATGGAGAAGCTGACATGGCCTAATGCAGACTCCAAGAAGCG 1373
Sbjct 736 -------------------------------------------------------------------------- 735
Query 1374 AATTCGAATGGACAGTTACACCAGTTACTGCAATGCTGTGTCTGACCTTCACTCAGCATCTGAGATAGACATGA 1447
Sbjct 736 -------------------------------------------------------------------------- 735
Query 1448 GTGTCAAGGCAGAGATGGGTCTAGGTGACAGAAAAGGAAGTAATGGCTCTCTAGAAGAATGGTATGACCAGGAT 1521
Sbjct 736 -------------------------------------------------------------------------- 735
Query 1522 AAGCCTGAAGTCTCTCTCCTCTTCCAGTTCCTGCAGATCCTTACAGCCTGCTTTGGGTCATTCGCCCATGGTGG 1595
Sbjct 736 -------------------------------------------------------------------------- 735
Query 1596 CAATGACGTAAGCAATGCCATTGGGCCTCTGGTTGCTTTATATTTGGTTTATGACACAGGAGATGTTTCTTCAA 1669
Sbjct 736 -------------------------------------------------------------------------- 735
Query 1670 AAGTGGCAACACCAATATGGCTTCTACTCTATGGTGGTGTTGGTATCTGTGTTGGTCTGTGGGTTTGGGGAAGA 1743
Sbjct 736 -------------------------------------------------------------------------- 735
Query 1744 AGAGTTATCCAGACCATGGGGAAGGATCTGACACCGATCACACCCTCTAGTGGCTTCAGTATTGAACTGGCATC 1817
Sbjct 736 -------------------------------------------------------------------------- 735
Query 1818 TGCCCTCACTGTGGTGATTGCATCAAATATTGGCCTTCCCATCAGTACAACACATTGTAAAGTGGGCTCTGTTG 1891
Sbjct 736 -------------------------------------------------------------------------- 735
Query 1892 TGTCTGTTGGCTGGCTCCGGTCCAAGAAGGCTGTTGACTGGCGTCTCTTTCGTAACATTTTTATGGCCTGGTTT 1965
Sbjct 736 -------------------------------------------------------------------------- 735
Query 1966 GTCACAGTCCCCATTTCTGGAGTTATCAGTGCTGCCATCATGGCAATCTTCAGATATGTCATCCTCAGAATG 2037
Sbjct 736 ------------------------------------------------------------------------ 735
