Nucleotide Global Alignment

Description

Query:
TRCN0000479800
Subject:
NM_001159593.1
Aligned Length:
2070
Identities:
625
Gaps:
1368

Alignment

Query    1  ------------ATGGCAACGCTGATTACCAGTACTACAGCTGCTACCGCCGCTTCTGGTCC-------TTTGG  55
                        .|||||||   ||||||.|||||...|||||||....|.|||||.|.|||       |.|  
Sbjct    1  ATGGAATCTACTGTGGCAAC---GATTACTAGTACCCTAGCTGCTGTTACTGCTTCCGCTCCACCGAAGTAT--  69

Query   56  TGGACTACCTATGGATGCTCATCCTGGGCTTCATTATTGCATTTGTCTTGGCATTCTCCGTGGGAGCCAATGAT  129
              |||.|.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct   70  --GACAATCTATGGATGCTCATCCTGGGCTTCATCATTGCATTTGTCTTGGCATTCTCCGTGGGAGCCAATGAT  141

Query  130  GTAGCAAATTCTTTTGGTACAGCTGTGGGCTCAGGTGTAGTGACCCTGAAGCAAGCCTGCATCCTAGCTAGCAT  203
            |||||||||||.||.|||||||||||.||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct  142  GTAGCAAATTCGTTCGGTACAGCTGTAGGCTCAGGTGTAGTGACCCTGAAGCAAGCCTGCATCTTAGCTAGCAT  215

Query  204  CTTTGAAACAGTGGGCTCTGTCTTACTGGGGGCCAAAGTGAGCGAAACCATCCGGAAGGGCTTGATTGACGTGG  277
            |||.|||||.||||||||.|.|||.||||||||||||||||||||||||||||||||.||||||||.||.||||
Sbjct  216  CTTCGAAACTGTGGGCTCCGCCTTGCTGGGGGCCAAAGTGAGCGAAACCATCCGGAACGGCTTGATAGATGTGG  289

Query  278  AGATGTACAACTCGACTCAAGGGCTACTGATGGCCGGCTCAGTCAGTGCTATGTTTGGTTCTGCTGTGTGGCAA  351
            ||.||||||||...|||||||..||.||.|||||.|||||.||||||||||||||||||||||||||||||||.
Sbjct  290  AGCTGTACAACGAAACTCAAGATCTGCTCATGGCTGGCTCCGTCAGTGCTATGTTTGGTTCTGCTGTGTGGCAG  363

Query  352  CTCGTGGCTTCGTTTTTGAAGCTCCCTATTTCTGGAACCCATTGTATTGTTGGTGCAACTATTGGTTTCTCCCT  425
            |||||||||||||||||||||||.||.||||||||.||||||||||||||.||||||||.||||||||||||||
Sbjct  364  CTCGTGGCTTCGTTTTTGAAGCTTCCGATTTCTGGGACCCATTGTATTGTCGGTGCAACCATTGGTTTCTCCCT  437

Query  426  CGTGGCAAAGGGGCAGGAGGGTGTCAAGTGGTCTGAACTGATAAAAATTGTGATGTCTTGGTTCGTGTCCCCAC  499
            .||||||||.||||||.||||||||||||||||||||||||||||||||||||||||.||||||||.||.||.|
Sbjct  438  TGTGGCAAATGGGCAGAAGGGTGTCAAGTGGTCTGAACTGATAAAAATTGTGATGTCGTGGTTCGTCTCTCCGC  511

Query  500  TGCTTTCTGGAATTATGTCTGGAATTTTATTCTTCCTGGTTCGTGCATTCATCCTCCATAAGGCAGATCCAGTT  573
            ||||||||||.||||||||||||||||||||||||||.||||||||.||||||||||.||||||||||||.|||
Sbjct  512  TGCTTTCTGGTATTATGTCTGGAATTTTATTCTTCCTTGTTCGTGCGTTCATCCTCCGTAAGGCAGATCCGGTT  585

Query  574  CCTAATGGTTTGCGAGCTTTGCCAGTTTTCTATGCCTGCACAGTTGGAATAAACCTCTTTTCCATCATGTATAC  647
            ||||||||.||.||||||||.|||.||||.||||||||||||.|.|||||.||||||||||||||.||||||||
Sbjct  586  CCTAATGGCTTACGAGCTTTACCAATTTTTTATGCCTGCACAATCGGAATCAACCTCTTTTCCATTATGTATAC  659

Query  648  TGGAGCACCGTTGCTGGGCTTTGACAAACTTCCT---------CTG---TGGGGTACCATCCTCATCTCGGTGG  709
            |||||||||||.||||         |||..||||         |||   ||      ||||  |||.||.|..|
Sbjct  660  TGGAGCACCGTGGCTG---------AAATCTCCTAGAAGGTGGCTGGCCTG------CATC--CATTTCAGAAG  716

Query  710  GATGTGCAG--TTTTCTGTGCCCTTATCGTCTGGTTCTTTGTATGTCCCAGGATGAAGAGAAAAATTGAACGAG  781
            |  .|||||  |..|.|.|||                                                     
Sbjct  717  G--CTGCAGGCTAGTGTATGC-----------------------------------------------------  735

Query  782  AAATAAAGTGTAGTCCTTCTGAAAGCCCCTTAATGGAAAAAAAGAATAGCTTGAAAGAAGACCATGAAGAAACA  855
                                                                                      
Sbjct  736  --------------------------------------------------------------------------  735

Query  856  AAGTTGTCTGTTGGTGATATTGAAAACAAGCATCCTGTTTCTGAGGTAGGGCCTGCCACTGTGCCCCTCCAGGC  929
                                                                                      
Sbjct  736  --------------------------------------------------------------------------  735

Query  930  TGTGGTGGAGGAGAGAACAGTCTCATTCAAACTTGGAGATTTGGAGGAAGCTCCAGAGAGAGAGAGGCTTCCCA  1003
                                                                                      
Sbjct  736  --------------------------------------------------------------------------  735

Query 1004  GCGTGGACTTGAAAGAGGAAACCAGCATAGATAGCACCGTGAATGGTGCAGTGCAGTTGCCTAATGGGAACCTT  1077
                                                                                      
Sbjct  736  --------------------------------------------------------------------------  735

Query 1078  GTCCAGTTCAGTCAAGCCGTCAGCAACCAAATAAACTCCAGTGGCCACTACCAGTATCACACCGTGCATAAGGA  1151
                                                                                      
Sbjct  736  --------------------------------------------------------------------------  735

Query 1152  TTCCGGCCTGTACAAAGAGCTACTCCATAAATTACATCTTGCCAAGGTGGGAGATTGCATGGGAGACTCCGGTG  1225
                                                                                      
Sbjct  736  --------------------------------------------------------------------------  735

Query 1226  ACAAACCCTTAAGGCGCAATAATAGCTATACTTCCTATACCATGGCAATATGTGGCATGCCTCTGGATTCATTC  1299
                                                                                      
Sbjct  736  --------------------------------------------------------------------------  735

Query 1300  CGTGCCAAAGAAGGTGAACAGAAGGGCGAAGAAATGGAGAAGCTGACATGGCCTAATGCAGACTCCAAGAAGCG  1373
                                                                                      
Sbjct  736  --------------------------------------------------------------------------  735

Query 1374  AATTCGAATGGACAGTTACACCAGTTACTGCAATGCTGTGTCTGACCTTCACTCAGCATCTGAGATAGACATGA  1447
                                                                                      
Sbjct  736  --------------------------------------------------------------------------  735

Query 1448  GTGTCAAGGCAGAGATGGGTCTAGGTGACAGAAAAGGAAGTAATGGCTCTCTAGAAGAATGGTATGACCAGGAT  1521
                                                                                      
Sbjct  736  --------------------------------------------------------------------------  735

Query 1522  AAGCCTGAAGTCTCTCTCCTCTTCCAGTTCCTGCAGATCCTTACAGCCTGCTTTGGGTCATTCGCCCATGGTGG  1595
                                                                                      
Sbjct  736  --------------------------------------------------------------------------  735

Query 1596  CAATGACGTAAGCAATGCCATTGGGCCTCTGGTTGCTTTATATTTGGTTTATGACACAGGAGATGTTTCTTCAA  1669
                                                                                      
Sbjct  736  --------------------------------------------------------------------------  735

Query 1670  AAGTGGCAACACCAATATGGCTTCTACTCTATGGTGGTGTTGGTATCTGTGTTGGTCTGTGGGTTTGGGGAAGA  1743
                                                                                      
Sbjct  736  --------------------------------------------------------------------------  735

Query 1744  AGAGTTATCCAGACCATGGGGAAGGATCTGACACCGATCACACCCTCTAGTGGCTTCAGTATTGAACTGGCATC  1817
                                                                                      
Sbjct  736  --------------------------------------------------------------------------  735

Query 1818  TGCCCTCACTGTGGTGATTGCATCAAATATTGGCCTTCCCATCAGTACAACACATTGTAAAGTGGGCTCTGTTG  1891
                                                                                      
Sbjct  736  --------------------------------------------------------------------------  735

Query 1892  TGTCTGTTGGCTGGCTCCGGTCCAAGAAGGCTGTTGACTGGCGTCTCTTTCGTAACATTTTTATGGCCTGGTTT  1965
                                                                                      
Sbjct  736  --------------------------------------------------------------------------  735

Query 1966  GTCACAGTCCCCATTTCTGGAGTTATCAGTGCTGCCATCATGGCAATCTTCAGATATGTCATCCTCAGAATG  2037
                                                                                    
Sbjct  736  ------------------------------------------------------------------------  735

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