Nucleotide Global Alignment

Description

Query:
TRCN0000479889
Subject:
NM_001165036.2
Aligned Length:
3092
Identities:
1210
Gaps:
1846

Alignment

Query    1  ATGTTTCATTTAAGGACTTGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAGACTGTTAAGACATTTTCACA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTTTCATTTAAGGACTTGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAGACTGTTAAGACATTTTCACA  74

Query   75  AAACAGACCAGCAGCAGCTAGGACATTTCAACAGATTCGGTGCTATTCTGCACCTGTTGCTGCTGAGCCCTTTC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AAACAGACCAGCAGCAGCTAGGACATTTCAACAGATTCGGTGCTATTCTGCACCTGTTGCTGCTGAGCCCTTTC  148

Query  149  TCAGTGGGACTAGTTCGAACTATGTGGAGGAGATGTACTGTGCTTGGCTGGAAAACCCCAAAAGTGTACATAAG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCAGTGGGACTAGTTCGAACTATGTGGAGGAGATGTACTGTGCTTGGCTGGAAAACCCCAAAAGTGTACATAAG  222

Query  223  TCATGGGACATTTTTTTTCGCAACACGAATGCCGGAGCCCCACCGGGCACTGCCTACCAGAGTCCCCTTCCCCT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCATGGGACATTTTTTTTCGCAACACGAATGCCGGAGCCCCACCGGGCACTGCCTACCAGAGTCCCCTTCCCCT  296

Query  297  GAGCCGAGGCTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAGCCGAGGCTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCG  370

Query  371  TGGAGGACCACCTGGCAGTGCAGTCGCTCATCAGGGCATATCAGATACGAGGGCACCATGTAGCACAGCTGGAC  444
            ||||||||||||||||||||||||||||||||||||||||||||.|..|.||.|||||..|.|||.|.||.||.
Sbjct  371  TGGAGGACCACCTGGCAGTGCAGTCGCTCATCAGGGCATATCAGGTCAGGGGTCACCACATTGCAAAACTTGAT  444

Query  445  CCCCTGGGGAT------------TTTGGATGCTGATCTGGACTCCTCCGTGCCCGCTGACATTA----TCTCAT  502
            ||.||.||.||            |||.||||.||.||                      ||.||    |.||.|
Sbjct  445  CCTCTCGGAATTAGTTGTGTAAATTTTGATGATGCTC----------------------CAGTAACTGTTTCTT  496

Query  503  CCACAGACAAAC-TTGGGTTCTATGGCCTGGATGAGTCTGACCTCGACAAGGTCTTCCACTTGCCCACCACCAC  575
                   ||||| |.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  497  -------CAAACGTGGGGTTCTATGGCCTGGATGAGTCTGACCTCGACAAGGTCTTCCACTTGCCCACCACCAC  563

Query  576  TTTCATCGGGGGACAGGAATCAGCACTTCCTCTGCGGGAGATCATCCGTCGGCTGGAGATGGCCTACTGCCAGC  649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  564  TTTCATCGGGGGACAGGAATCAGCACTTCCTCTGCGGGAGATCATCCGTCGGCTGGAGATGGCCTACTGCCAGC  637

Query  650  ATATTGGGGTGGAGTTCATGTTCATCAATGACCTGGAGCAGTGCCAGTGGATCCGGCAGAAGTTTGAGACCCCT  723
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  638  ATATTGGGGTGGAGTTCATGTTCATCAATGACCTGGAGCAGTGCCAGTGGATCCGGCAGAAGTTTGAGACCCCT  711

Query  724  GGGATCATGCAGTTCACAAATGAGGAGAAACGGACCCTGCTGGCCAGGCTTGTGCGGTCCACCAGGTTTGAGGA  797
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  712  GGGATCATGCAGTTCACAAATGAGGAGAAACGGACCCTGCTGGCCAGGCTTGTGCGGTCCACCAGGTTTGAGGA  785

Query  798  GTTCCTACAGCGGAAGTGGTCCTCTGAGAAGCGCTTTGGTCTAGAAGGCTGCGAGGTACTGATCCCTGCCCTCA  871
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  786  GTTCCTACAGCGGAAGTGGTCCTCTGAGAAGCGCTTTGGTCTAGAAGGCTGCGAGGTACTGATCCCTGCCCTCA  859

Query  872  AGACCATCATTGACAAGTCTAGTGAGAATGGCGTGGACTACGTGATCATGGGCATGCCACACAGAGGGCGGCTG  945
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  860  AGACCATCATTGACAAGTCTAGTGAGAATGGCGTGGACTACGTGATCATGGGCATGCCACACAGAGGGCGGCTG  933

Query  946  AACGTGCTTGCAAATGTCATCAGGAAGGAGCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGC  1019
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  934  AACGTGCTTGCAAATGTCATCAGGAAGGAGCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGC  1007

Query 1020  TGATGAGGGCTCCGGAGATGTGAAGTACCACCTGGGCATGTATCACCGCAGGATCAATCGTGTCACCGACAGGA  1093
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1008  TGATGAGGGCTCCGGAGATGTGAAGTACCACCTGGGCATGTATCACCGCAGGATCAATCGTGTCACCGACAGGA  1081

Query 1094  ACATTACCTTGTCCTTGGTGGCCAACCCTTCCCACCTTGAGGCCGCTGACCCCGTGGTGATGGGCAAGACCAAA  1167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1082  ACATTACCTTGTCCTTGGTGGCCAACCCTTCCCACCTTGAGGCCGCTGACCCCGTGGTGATGGGCAAGACCAAA  1155

Query 1168  GCCGAACAGTTTTACTGTGGCGACACTGAAGGGAAAAAGGTAAGGCCCA-----------GAGAGAGGCGTGCA  1230
            |||||||||||||||||||||||||||||||||||||||||.|.|.|||           | |.||.|| ||||
Sbjct 1156  GCCGAACAGTTTTACTGTGGCGACACTGAAGGGAAAAAGGTCATGTCCATCCTGTTGCATG-GGGATGC-TGCA  1227

Query 1231  ----------AGG-------------------------CAG---------ATC--------GTCAAGGCCCCAT  1252
                      |||                         |||         |||        .|||.|||.||.|
Sbjct 1228  TTTGCTGGCCAGGGCATTGTGTACGAGACCTTCCACCTCAGCGACCTGCCATCCTACACAACTCATGGCACCGT  1301

Query 1253  GTTCCAGCATGG------------AGTTCCGC-TCACCAACA--------------------------------  1281
            |   || |.|||            ||.||.|| ||||||.|.                                
Sbjct 1302  G---CA-CGTGGTCGTCAACAACCAGATCGGCTTCACCACCGACCCTCGGATGGCCCGCTCCTCCCCCTACCCC  1371

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1372  ACTGACGTGGCCCGAGTGGTGAATGCCCCCATTTTCCACGTGAACTCAGATGACCCCGAGGCTGTCATGTACGT  1445

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1446  GTGCAAAGTGGCGGCCGAGTGGAGGAGCACCTTCCACAAGGACGTGGTTGTCGATTTGGTGTGTTACCGGCGCA  1519

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1520  ACGGCCACAACGAGATGGATGAGCCCATGTTCACGCAGCCGCTCATGTACAAGCAGATCCGCAAGCAGAAGCCT  1593

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1594  GTGTTACAGAAGTACGCTGAGCTGCTGGTGTCGCAGGGTGTGGTCAACCAGCCTGAGTATGAGGAGGAAATTTC  1667

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1668  CAAGTATGATAAGATCTGTGAGGAAGCTTTTGCCAGATCTAAAGATGAGAAGATCTTGCACATTAAGCACTGGC  1741

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1742  TGGACTCTCCCTGGCCTGGCTTCTTCACCCTGGACGGGCAGCCCAGGAGCATGTCCTGCCCCTCCACGGGTCTG  1815

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1816  ACGGAGGATATTCTGACACACATCGGGAATGTGGCTAGTTCTGTGCCTGTGGAAAACTTTACTATTCATGGAGG  1889

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1890  GCTGAGCCGGATCTTGAAGACTCGTGGGGAAATGGTGAAGAACCGGACTGTGGACTGGGCTCTAGCGGAGTACA  1963

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1964  TGGCGTTTGGCTCGCTCCTGAAGGAGGGCATCCACATTCGGCTGAGCGGCCAGGACGTGGAGCGGGGCACATTC  2037

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2038  AGCCACCGCCACCATGTGCTCCATGACCAGAATGTGGACAAGAGAACCTGCATCCCCATGAACCATCTCTGGCC  2111

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2112  CAATCAGGCCCCCTATACTGTGTGCAACAGCTCACTGTCTGAGTACGGCGTGCTGGGCTTTGAGCTGGGCTTCG  2185

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2186  CCATGGCCAGTCCTAATGCCCTGGTCCTCTGGGAAGCCCAATTTGGTGACTTCCACAACACGGCCCAGTGTATC  2259

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2260  ATCGACCAGTTCATCTGCCCGGGACAAGCCAAGTGGGTGCGGCAGAATGGCATCGTGTTGCTGCTGCCCCATGG  2333

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2334  CATGGAGGGCATGGGTCCAGAACATTCCTCCGCCCGCCCAGAGCGGTTCTTGCAGATGTGCAACGATGACCCAG  2407

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2408  ATGTCCTGCCAGACCTTAAAGAAGCCAACTTCGACATCAATCAGCTATATGACTGCAATTGGGTTGTTGTCAAC  2481

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2482  TGCTCCACTCCTGGCAACTTCTTCCACGTGCTACGACGCCAGATCCTGCTGCCATTCCGGAAGCCGTTAATTAT  2555

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2556  CTTCACCCCCAAATCCCTGTTGCGCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGCTTCCAGGAACCCACT  2629

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2630  TCCAGCGGGTGATCCCAGAAGATGGCCCTGCAGCTCAGAACCCAGAAAATGTCAAAAGGCTTCTCTTCTGCACC  2703

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2704  GGCAAAGTGTATTATGACCTCACCCGGGAGCGCAAAGCACGCGACATGGTGGGGCAGGTGGCCATCACAAGGAT  2777

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2778  TGAGCAGCTGTCGCCATTCCCCTTTGACCTCCTGCTGAAGGAGGTGCAGAAGTACCCCAATGCTGAGCTGGCCT  2851

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2852  GGTGCCAGGAGGAGCACAAGAACCAAGGCTACTATGACTACGTGAAGCCAAGACTTCGGACCACCATCAGCCGC  2925

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2926  GCCAAGCCCGTCTGGTATGCCGGCCGGGACCCAGCGGCTGCTCCAGCCACCGGCAACAAGAAGACCCACCTGAC  2999

Query 1282  ----------------------------------------------------------  1281
                                                                      
Sbjct 3000  GGAGCTGCAGCGCCTCCTGGACACGGCCTTCGACCTGGACGTCTTCAAGAACTTCTCG  3057

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