Nucleotide Global Alignment

Description

Query:
TRCN0000479889
Subject:
NM_001252287.1
Aligned Length:
3075
Identities:
1162
Gaps:
1800

Alignment

Query    1  ATGTTTCATTTAAGGACTTGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAGACTGTTAAGACATTTTCACA  74
            ||||||||||||||||||||||||||||||||.|||||||||||.||.||||||||||||||||||||||||||
Sbjct    1  ATGTTTCATTTAAGGACTTGTGCTGCTAAGTTAAGGCCATTGACAGCCTCCCAGACTGTTAAGACATTTTCACA  74

Query   75  AAACAGACCAGCAGCAGCTAGGACATTTCAACAGATTCGGTGCTATTCTGCACCTGTTGCTGCTGAGCCCTTTC  148
            |||||.||||||||||..||||||.||||||||||||||||||||||||||||||||.||||||||.||.||||
Sbjct   75  AAACAAACCAGCAGCAATTAGGACGTTTCAACAGATTCGGTGCTATTCTGCACCTGTAGCTGCTGAACCATTTC  148

Query  149  TCAGTGGGACTAGTTCGAACTATGTGGAGGAGATGTACTGTGCTTGGCTGGAAAACCCCAAAAGTGTACATAAG  222
            |.|||||||||||||||||||||||||||||.|||||||||||.|||.||||.||.||||||||||||||||||
Sbjct  149  TTAGTGGGACTAGTTCGAACTATGTGGAGGAAATGTACTGTGCCTGGTTGGAGAATCCCAAAAGTGTACATAAG  222

Query  223  TCATGGGACATTTTTTTTCGCAACACGAATGCCGGAGCCCCACCGGGCACTGCCTACCAGAGTCCCCTTCCCCT  296
            |||||||||||||||||.||.|||||.|||||.|||||||||||||||||||||||||||||.||||||.||||
Sbjct  223  TCATGGGACATTTTTTTCCGAAACACCAATGCTGGAGCCCCACCGGGCACTGCCTACCAGAGCCCCCTTTCCCT  296

Query  297  GAGCCGAGGCTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCG  370
            |||.|||.|||||||||||.|..||||||||||||||||||||||.||||||||.||.|||||.|||||.||||
Sbjct  297  GAGTCGAAGCTCCCTGGCTACCATGGCCCATGCACAGTCCCTGGTGGAAGCACAACCTAACGTCGACAAACTCG  370

Query  371  TGGAGGACCACCTGGCAGTGCAGTCGCTCATCAGGGCATATCAGATACGAGGGCACCATGTAGCACAGCTGGAC  444
            |||||||||||.||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGGAGGACCACTTGGCGGTGCAGTCTCTCATCAGGGCATATCAGATACGAGGGCACCATGTAGCACAGCTGGAC  444

Query  445  CCCCTGGGGATTTTGGATGCTGATCTGGACTCCTCCGTGCCCGCTGACATTATCTCATCCACAGACAAACTTGG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCCCTGGGGATTTTGGATGCTGATCTGGACTCCTCCGTGCCCGCTGACATTATCTCATCCACAGACAAACTTGG  518

Query  519  GTTCTATGGCCTGGATGAGTCTGACCTCGACAAGGTCTTCCACTTGCCCACCACCACTTTCATCGGGGGACAGG  592
            ||||||||||||..|.|||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||
Sbjct  519  GTTCTATGGCCTACACGAGTCTGACCTTGACAAGGTCTTCCACTTACCCACCACCACTTTCATCGGGGGACAGG  592

Query  593  AATCAGCACTTCCTCTGCGGGAGATCATCCGTCGGCTGGAGATGGCCTACTGCCAGCATATTGGGGTGGAGTTC  666
            |..|||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||
Sbjct  593  AGCCAGCACTTCCTCTTCGGGAGATCATCCGTCGGCTGGAGATGGCCTACTGCCAGCACATTGGTGTGGAGTTC  666

Query  667  ATGTTCATCAATGACCTGGAGCAGTGCCAGTGGATCCGGCAGAAGTTTGAGACCCCTGGGATCATGCAGTTCAC  740
            ||||||||.|||||..||||.||.||||||||||||||.||||||||||||||||||||.||||||||||||||
Sbjct  667  ATGTTCATTAATGATTTGGAACAATGCCAGTGGATCCGACAGAAGTTTGAGACCCCTGGAATCATGCAGTTCAC  740

Query  741  AAATGAGGAGAAACGGACCCTGCTGGCCAGGCTTGTGCGGTCCACCAGGTTTGAGGAGTTCCTACAGCGGAAGT  814
            .|||||||||||.||||||.||||||||||||||||.||.|||||||||||||||||||||||||||||.||||
Sbjct  741  CAATGAGGAGAAGCGGACCTTGCTGGCCAGGCTTGTACGATCCACCAGGTTTGAGGAGTTCCTACAGCGAAAGT  814

Query  815  GGTCCTCTGAGAAGCGCTTTGGTCTAGAAGGCTGCGAGGTACTGATCCCTGCCCTCAAGACCATCATTGACAAG  888
            |||||||.||||||||.||||||||.||||||||.|||||.||||||||||||||||||||.||||||||.|.|
Sbjct  815  GGTCCTCGGAGAAGCGTTTTGGTCTGGAAGGCTGTGAGGTGCTGATCCCTGCCCTCAAGACAATCATTGATATG  888

Query  889  TCTAGTGAGAATGGCGTGGACTACGTGATCATGGGCATGCCACACAGAGGGCGGCTGAACGTGCTTGCAAATGT  962
            ||.||||..|||||.||||||||.|||||||||||.||||||||||||||.|||||||||||||||||||||||
Sbjct  889  TCAAGTGCAAATGGAGTGGACTATGTGATCATGGGGATGCCACACAGAGGACGGCTGAACGTGCTTGCAAATGT  962

Query  963  CATCAGGAAGGAGCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCTGATGAGGGCTCCGGAG  1036
            ||||||||||||||||||.||.||.||||||||.||.||.||||||||||||||||||||||||||.||.||.|
Sbjct  963  CATCAGGAAGGAGCTGGAGCAAATATTCTGTCAGTTTGACTCAAAGCTGGAGGCAGCTGATGAGGGTTCTGGGG  1036

Query 1037  ATGTGAAGTACCACCTGGGCATGTATCACCGCAGGATCAATCGTGTCACCGACAGGAACATTACCTTGTCCTTG  1110
            |..|||||||||||||||||||||||||||||||||||||.|||||.||||||||.|||||.||.|||||||||
Sbjct 1037  ACATGAAGTACCACCTGGGCATGTATCACCGCAGGATCAACCGTGTGACCGACAGAAACATCACTTTGTCCTTG  1110

Query 1111  GTGGCCAACCCTTCCCACCTTGAGGCCGCTGACCCCGTGGTGATGGGCAAGACCAAAGCCGAACAGTTTTACTG  1184
            |||||.|||||||||||.||.|||||.||||||||.||.||||||||.|||||||||||.||||||||.|||||
Sbjct 1111  GTGGCTAACCCTTCCCATCTAGAGGCTGCTGACCCTGTCGTGATGGGAAAGACCAAAGCTGAACAGTTCTACTG  1184

Query 1185  TGGCGACACTGAAGGGAAAAAGGTAAGGCC----------CAGAGAGAGGC-----GTGCAAGGCAG---ATCG  1240
            |||.||||||||||||||||||||.|.|.|          ||..|.||.||     .|||..|.|||   ||||
Sbjct 1185  TGGAGACACTGAAGGGAAAAAGGTGATGTCTATCCTGCTGCATGGGGATGCTGCTTTTGCTGGCCAGGGCATCG  1258

Query 1241  TCA----AGGCC--CCATGTTCCAGCATGGAGTT-CCG--CT-CAC---------------------------C  1277
            | |    ||.||  ||||.|  ||||   ||.|| |||  || |||                           |
Sbjct 1259  T-ATATGAGACCTTCCATCT--CAGC---GACTTGCCGTCCTACACAACCCATGGCACTGTTCATGTGGTTGTC  1326

Query 1278  AACA----------------------------------------------------------------------  1281
            ||||                                                                      
Sbjct 1327  AACAACCAGATTGGCTTCACCACAGACCCTCGGATGGCCCGCTCCTCTCCCTACCCCACTGATGTGGCCCGAGT  1400

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1401  GGTGAATGCCCCCATTTTCCATGTCAACTCAGATGACCCTGAAGCTGTCATGTATGTATGCAAGGTGGCAGCTG  1474

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1475  AGTGGAGAAACACCTTCCACAAGGATGTTGTAGTTGATCTGGTGTGTTATCGACGAAATGGCCACAATGAGATG  1548

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1549  GACGAACCTATGTTTACACAGCCACTCATGTACAAGCAGATCCGCAAGCAGAAGCCTGTACTGCAGAAGTATGC  1622

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1623  AGAATTGCTAGTCTCCCAGGGTGTCGTCAATCAGCCTGAGTACGAGGAGGAAATCTCCAAGTATGATAAGATCT  1696

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1697  GTGAGGAAGCATTTACCAGATCCAAAGATGAGAAGATCTTGCACATCAAGCACTGGCTGGATTCCCCCTGGCCT  1770

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1771  GGCTTTTTCACCCTGGATGGACAGCCCAGGAGCATGACCTGCCCCTCCACTGGCCTGGAGGAGGATGTCTTGTT  1844

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1845  CCACATTGGAAAGGTGGCCAGCTCTGTACCTGTGGAGAACTTTACTATCCATGGAGGGCTGAGCCGGATCTTGA  1918

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1919  AGACCCGCAGAGAGCTTGTGACGAACCGGACTGTGGACTGGGCCCTGGCAGAGTACATGGCATTTGGCTCACTG  1992

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1993  CTGAAGGAAGGCATCCATGTGCGGCTGAGTGGCCAGGATGTGGAGCGGGGCACCTTCAGCCATCGCCACCATGT  2066

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2067  GCTCCATGATCAGAATGTTGACAAAAGAACCTGCATCCCCATGAACCACCTTTGGCCAAATCAGGCCCCTTACA  2140

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2141  CTGTATGCAACAGCTCGCTGTCTGAGTACGGTGTCCTGGGCTTTGAGCTGGGCTTTGCCATGGCTAGCCCTAAT  2214

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2215  GCTCTGGTTCTCTGGGAGGCCCAGTTTGGTGACTTCAACAACATGGCACAGTGCATCATTGACCAGTTCATCTG  2288

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2289  CCCAGGACAGGCAAAGTGGGTGCGGCAGAATGGCATTGTGCTCCTGCTGCCTCATGGCATGGAAGGCATGGGTC  2362

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2363  CCGAGCATTCCTCTGCCCGCCCAGAGCGGTTTCTGCAGATGTGCAATGATGACCCAGATGTCCTGCCTGACCTG  2436

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2437  CAGGAAGAAAACTTTGACATCAATCAGCTCTATGACTGCAACTGGATTGTTGTCAACTGTTCCACCCCTGGCAA  2510

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2511  CTTCTTCCATGTGCTGCGACGACAGATCTTGCTGCCCTTCCGGAAGCCGTTAATCGTCTTCACTCCCAAATCCC  2584

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2585  TCCTGCGCCACCCTGAGGCAAGAACTAGCTTTGACGAGATGCTGCCAGGAACGCACTTCCAGCGTGTGATCCCA  2658

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2659  GAAAATGGACCTGCAGCTCAGGACCCACACAAAGTCAAGAGACTTCTCTTCTGCACTGGGAAGGTGTACTATGA  2732

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2733  CCTCACCCGAGAGCGCAAAGCCAGGAACATGGAGGAGGAGGTGGCTATTACAAGGATTGAGCAGCTATCACCAT  2806

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2807  TCCCCTTTGACCTCCTGCTGAAAGAGGCACAGAAGTATCCCAATGCTGAGCTGGCCTGGTGCCAGGAAGAGCAC  2880

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2881  AAGAACCAAGGCTACTATGACTATGTCAAGCCAAGACTTCGTACCACCATTGACCGTGCTAAGCCTGTCTGGTA  2954

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2955  TGCTGGCCGAGACCCGGCAGCTGCTCCAGCCACTGGCAACAAGAAAACACACCTGACAGAGCTGCAGCGCTTTC  3028

Query 1282  -----------------------------------------  1281
                                                     
Sbjct 3029  TGGACACAGCCTTTGACCTGGACGCATTCAAGAAATTCTCT  3069

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