Nucleotide Global Alignment
Description
- Query:
- TRCN0000479889
- Subject:
- NM_001363523.2
- Aligned Length:
- 3119
- Identities:
- 1222
- Gaps:
- 1855
Alignment
Query 1 ATGTTTCATTTAAGGACTTGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAGACTGTTAAGACATTTTCACA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTTTCATTTAAGGACTTGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAGACTGTTAAGACATTTTCACA 74
Query 75 AAACAGACCAGCAGCAGCTAGGACATTTCAACAGATTCGGTGCTATTCTGCACCTGTTGCTGCTGAGCCCTTTC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AAACAGACCAGCAGCAGCTAGGACATTTCAACAGATTCGGTGCTATTCTGCACCTGTTGCTGCTGAGCCCTTTC 148
Query 149 TCAGTGGGACTAGTTCGAACTATGTGGAGGAGATGTACTGTGCTTGGCTGGAAAACCCCAAAAGTGTACATAAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCAGTGGGACTAGTTCGAACTATGTGGAGGAGATGTACTGTGCTTGGCTGGAAAACCCCAAAAGTGTACATAAG 222
Query 223 TCATGGGACATTTTTTTTCGCAACACGAATGCCGGAGCCCCACCGGGCACTGCCTACCAGAGTCCCCTTCCCCT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCATGGGACATTTTTTTTCGCAACACGAATGCCGGAGCCCCACCGGGCACTGCCTACCAGAGTCCCCTTCCCCT 296
Query 297 GAGCCGAGGCTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAGCCGAGGCTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCG 370
Query 371 TGGAGGACCACCTGGCAGTGCAGTCGCTCATCAGGGCATATCAGATACGAGGGCACCATGTAGCACAGCTGGAC 444
||||||||||||||||||||||||||||||||||||||||||||.|..|.||.|||||..|.|||.|.||.||.
Sbjct 371 TGGAGGACCACCTGGCAGTGCAGTCGCTCATCAGGGCATATCAGGTCAGGGGTCACCACATTGCAAAACTTGAT 444
Query 445 CCCCTGGGGAT------------TTTGGATGCTGATCTGG--AC----TCCTC---CGTGCCCGCTGACATTAT 497
||.||.||.|| |||.||||.||.||..| || ||.|| |||| .||
Sbjct 445 CCTCTCGGAATTAGTTGTGTAAATTTTGATGATGCTCCAGTAACTGTTTCTTCAAACGTG-----------GAT 507
Query 498 CT--CA---TCCACAGACAAACTT------------------GGGTTCTATGGCCTGGATGAGTCTGACCTCGA 548
|| || |.||..||...|||| ||||||||||||||||||||||||||||||||
Sbjct 508 CTTGCAGTTTTCAAGGAACGACTTCGAATGCTAACAGTAGGAGGGTTCTATGGCCTGGATGAGTCTGACCTCGA 581
Query 549 CAAGGTCTTCCACTTGCCCACCACCACTTTCATCGGGGGACAGGAATCAGCACTTCCTCTGCGGGAGATCATCC 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 582 CAAGGTCTTCCACTTGCCCACCACCACTTTCATCGGGGGACAGGAATCAGCACTTCCTCTGCGGGAGATCATCC 655
Query 623 GTCGGCTGGAGATGGCCTACTGCCAGCATATTGGGGTGGAGTTCATGTTCATCAATGACCTGGAGCAGTGCCAG 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 656 GTCGGCTGGAGATGGCCTACTGCCAGCATATTGGGGTGGAGTTCATGTTCATCAATGACCTGGAGCAGTGCCAG 729
Query 697 TGGATCCGGCAGAAGTTTGAGACCCCTGGGATCATGCAGTTCACAAATGAGGAGAAACGGACCCTGCTGGCCAG 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 730 TGGATCCGGCAGAAGTTTGAGACCCCTGGGATCATGCAGTTCACAAATGAGGAGAAACGGACCCTGCTGGCCAG 803
Query 771 GCTTGTGCGGTCCACCAGGTTTGAGGAGTTCCTACAGCGGAAGTGGTCCTCTGAGAAGCGCTTTGGTCTAGAAG 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 804 GCTTGTGCGGTCCACCAGGTTTGAGGAGTTCCTACAGCGGAAGTGGTCCTCTGAGAAGCGCTTTGGTCTAGAAG 877
Query 845 GCTGCGAGGTACTGATCCCTGCCCTCAAGACCATCATTGACAAGTCTAGTGAGAATGGCGTGGACTACGTGATC 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 878 GCTGCGAGGTACTGATCCCTGCCCTCAAGACCATCATTGACAAGTCTAGTGAGAATGGCGTGGACTACGTGATC 951
Query 919 ATGGGCATGCCACACAGAGGGCGGCTGAACGTGCTTGCAAATGTCATCAGGAAGGAGCTGGAACAGATCTTCTG 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 952 ATGGGCATGCCACACAGAGGGCGGCTGAACGTGCTTGCAAATGTCATCAGGAAGGAGCTGGAACAGATCTTCTG 1025
Query 993 TCAATTCGATTCAAAGCTGGAGGCAGCTGATGAGGGCTCCGGAGATGTGAAGTACCACCTGGGCATGTATCACC 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026 TCAATTCGATTCAAAGCTGGAGGCAGCTGATGAGGGCTCCGGAGATGTGAAGTACCACCTGGGCATGTATCACC 1099
Query 1067 GCAGGATCAATCGTGTCACCGACAGGAACATTACCTTGTCCTTGGTGGCCAACCCTTCCCACCTTGAGGCCGCT 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1100 GCAGGATCAATCGTGTCACCGACAGGAACATTACCTTGTCCTTGGTGGCCAACCCTTCCCACCTTGAGGCCGCT 1173
Query 1141 GACCCCGTGGTGATGGGCAAGACCAAAGCCGAACAGTTTTACTGTGGCGACACTGAAGGGAAAAAGGTAAGGCC 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.|.|
Sbjct 1174 GACCCCGTGGTGATGGGCAAGACCAAAGCCGAACAGTTTTACTGTGGCGACACTGAAGGGAAAAAGGTCATGTC 1247
Query 1215 CA-----------GAGAGAGGCGTGCA----------AGG-------------------------CAG------ 1236
|| | |.||.|| |||| ||| |||
Sbjct 1248 CATCCTGTTGCATG-GGGATGC-TGCATTTGCTGGCCAGGGCATTGTGTACGAGACCTTCCACCTCAGCGACCT 1319
Query 1237 ---ATC--------GTCAAGGCCCCATGTTCCAGCATGG------------AGTTCCGC-TCACCAACA----- 1281
||| .|||.|||.||.|| || |.||| ||.||.|| ||||||.|.
Sbjct 1320 GCCATCCTACACAACTCATGGCACCGTG---CA-CGTGGTCGTCAACAACCAGATCGGCTTCACCACCGACCCT 1389
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1390 CGGATGGCCCGCTCCTCCCCCTACCCCACTGACGTGGCCCGAGTGGTGAATGCCCCCATTTTCCACGTGAACTC 1463
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1464 AGATGACCCCGAGGCTGTCATGTACGTGTGCAAAGTGGCGGCCGAGTGGAGGAGCACCTTCCACAAGGACGTGG 1537
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1538 TTGTCGATTTGGTGTGTTACCGGCGCAACGGCCACAACGAGATGGATGAGCCCATGTTCACGCAGCCGCTCATG 1611
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1612 TACAAGCAGATCCGCAAGCAGAAGCCTGTGTTACAGAAGTACGCTGAGCTGCTGGTGTCGCAGGGTGTGGTCAA 1685
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1686 CCAGCCTGAGTATGAGGAGGAAATTTCCAAGTATGATAAGATCTGTGAGGAAGCTTTTGCCAGATCTAAAGATG 1759
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1760 AGAAGATCTTGCACATTAAGCACTGGCTGGACTCTCCCTGGCCTGGCTTCTTCACCCTGGACGGGCAGCCCAGG 1833
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1834 AGCATGTCCTGCCCCTCCACGGGTCTGACGGAGGATATTCTGACACACATCGGGAATGTGGCTAGTTCTGTGCC 1907
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1908 TGTGGAAAACTTTACTATTCATGGAGGGCTGAGCCGGATCTTGAAGACTCGTGGGGAAATGGTGAAGAACCGGA 1981
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1982 CTGTGGACTGGGCTCTAGCGGAGTACATGGCGTTTGGCTCGCTCCTGAAGGAGGGCATCCACATTCGGCTGAGC 2055
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2056 GGCCAGGACGTGGAGCGGGGCACATTCAGCCACCGCCACCATGTGCTCCATGACCAGAATGTGGACAAGAGAAC 2129
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2130 CTGCATCCCCATGAACCATCTCTGGCCCAATCAGGCCCCCTATACTGTGTGCAACAGCTCACTGTCTGAGTACG 2203
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2204 GCGTGCTGGGCTTTGAGCTGGGCTTCGCCATGGCCAGTCCTAATGCCCTGGTCCTCTGGGAAGCCCAATTTGGT 2277
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2278 GACTTCCACAACACGGCCCAGTGTATCATCGACCAGTTCATCTGCCCGGGACAAGCCAAGTGGGTGCGGCAGAA 2351
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2352 TGGCATCGTGTTGCTGCTGCCCCATGGCATGGAGGGCATGGGTCCAGAACATTCCTCCGCCCGCCCAGAGCGGT 2425
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2426 TCTTGCAGATGTGCAACGATGACCCAGATGTCCTGCCAGACCTTAAAGAAGCCAACTTCGACATCAATCAGCTA 2499
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2500 TATGACTGCAATTGGGTTGTTGTCAACTGCTCCACTCCTGGCAACTTCTTCCACGTGCTACGACGCCAGATCCT 2573
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2574 GCTGCCATTCCGGAAGCCGTTAATTATCTTCACCCCCAAATCCCTGTTGCGCCACCCCGAGGCCAGATCCAGCT 2647
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2648 TTGATGAGATGCTTCCAGGAACCCACTTCCAGCGGGTGATCCCAGAAGATGGCCCTGCAGCTCAGAACCCAGAA 2721
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2722 AATGTCAAAAGGCTTCTCTTCTGCACCGGCAAAGTGTATTATGACCTCACCCGGGAGCGCAAAGCACGCGACAT 2795
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2796 GGTGGGGCAGGTGGCCATCACAAGGATTGAGCAGCTGTCGCCATTCCCCTTTGACCTCCTGCTGAAGGAGGTGC 2869
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2870 AGAAGTACCCCAATGCTGAGCTGGCCTGGTGCCAGGAGGAGCACAAGAACCAAGGCTACTATGACTACGTGAAG 2943
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2944 CCAAGACTTCGGACCACCATCAGCCGCGCCAAGCCCGTCTGGTATGCCGGCCGGGACCCAGCGGCTGCTCCAGC 3017
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 3018 CACCGGCAACAAGAAGACCCACCTGACGGAGCTGCAGCGCCTCCTGGACACGGCCTTCGACCTGGACGTCTTCA 3091
Query 1282 ----------- 1281
Sbjct 3092 AGAACTTCTCG 3102
