Nucleotide Global Alignment
Description
- Query:
- TRCN0000479889
- Subject:
- XM_024446783.1
- Aligned Length:
- 3075
- Identities:
- 646
- Gaps:
- 2415
Alignment
Query 1 ATGTTTCATTTAAGGACTTGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAGACTGTTAAGACATTTTCACA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AAACAGACCAGCAGCAGCTAGGACATTTCAACAGATTCGGTGCTATTCTGCACCTGTTGCTGCTGAGCCCTTTC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCAGTGGGACTAGTTCGAACTATGTGGAGGAGATGTACTGTGCTTGGCTGGAAAACCCCAAAAGTGTACATAAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCATGGGACATTTTTTTTCGCAACACGAATGCCGGAGCCCCACCGGGCACTGCCTACCAGAGTCCCCTTCCCCT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GAGCCGAGGCTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGGAGGACCACCTGGCAGTGCAGTCGCTCATCAGGGCATATCAGATACGAGGGCACCATGTAGCACAGCTGGAC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CCCCTGGGGATTTTGGATGCTGATCTGGACTCCTCCGTGCCCGCTGACATTATCTCATCCACAGACAAACTTGG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ----------------ATGCTGATCTGGACTCCTCCGTGCCCGCTGACATTATCTCATCCACAGACAAACTTGG 58
Query 519 GTTCTATGGCCTGGATGAGTCTGACCTCGACAAGGTCTTCCACTTGCCCACCACCACTTTCATCGGGGGACAGG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 59 GTTCTATGGCCTGGATGAGTCTGACCTCGACAAGGTCTTCCACTTGCCCACCACCACTTTCATCGGGGGACAGG 132
Query 593 AATCAGCACTTCCTCTGCGGGAGATCATCCGTCGGCTGGAGATGGCCTACTGCCAGCATATTGGGGTGGAGTTC 666
|||||||||||||||||||||||||||||||||||||||
Sbjct 133 AATCAGCACTTCCTCTGCGGGAGATCATCCGTCGGCTGG----------------------------------- 171
Query 667 ATGTTCATCAATGACCTGGAGCAGTGCCAGTGGATCCGGCAGAAGTTTGAGACCCCTGGGATCATGCAGTTCAC 740
Sbjct 172 -------------------------------------------------------------------------- 171
Query 741 AAATGAGGAGAAACGGACCCTGCTGGCCAGGCTTGTGCGGTCCACCAGGTTTGAGGAGTTCCTACAGCGGAAGT 814
||||||||||||||||||||||||||||
Sbjct 172 ----------------------------------------------AGGTTTGAGGAGTTCCTACAGCGGAAGT 199
Query 815 GGTCCTCTGAGAAGCGCTTTGGTCTAGAAGGCTGCGAGGTACTGATCCCTGCCCTCAAGACCATCATTGACAAG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 200 GGTCCTCTGAGAAGCGCTTTGGTCTAGAAGGCTGCGAGGTACTGATCCCTGCCCTCAAGACCATCATTGACAAG 273
Query 889 TCTAGTGAGAATGGCGTGGACTACGTGATCATGGGCATGCCACACAGAGGGCGGCTGAACGTGCTTGCAAATGT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 274 TCTAGTGAGAATGGCGTGGACTACGTGATCATGGGCATGCCACACAGAGGGCGGCTGAACGTGCTTGCAAATGT 347
Query 963 CATCAGGAAGGAGCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCTGATGAGGGCTCCGGAG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 348 CATCAGGAAGGAGCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCTGATGAGGGCTCCGGAG 421
Query 1037 ATGTGAAGTACCACCTGGGCATGTATCACCGCAGGATCAATCGTGTCACCGACAGGAACATTACCTTGTCCTTG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 ATGTGAAGTACCACCTGGGCATGTATCACCGCAGGATCAATCGTGTCACCGACAGGAACATTACCTTGTCCTTG 495
Query 1111 GTGGCCAACCCTTCCCACCTTGAGGCCGCTGACCCCGTGGTGATGGGCAAGACCAAAGCCGAACAGTTTTACTG 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 GTGGCCAACCCTTCCCACCTTGAGGCCGCTGACCCCGTGGTGATGGGCAAGACCAAAGCCGAACAGTTTTACTG 569
Query 1185 TGGCGACACTGAAGGGAAAAAGGTAAGGCCCA-----------GAGAGAGGCGTGCA----------AGG---- 1233
||||||||||||||||||||||||.|.|.||| | |.||.|| |||| |||
Sbjct 570 TGGCGACACTGAAGGGAAAAAGGTCATGTCCATCCTGTTGCATG-GGGATGC-TGCATTTGCTGGCCAGGGCAT 641
Query 1234 ---------------------CAG---------ATC--------GTCAAGGCCCCATGTTCCAGCATGG----- 1264
||| ||| .|||.|||.||.|| || |.|||
Sbjct 642 TGTGTACGAGACCTTCCACCTCAGCGACCTGCCATCCTACACAACTCATGGCACCGTG---CA-CGTGGTCGTC 711
Query 1265 -------AGTTCCGC-TCACCAACA------------------------------------------------- 1281
||.||.|| ||||||.|.
Sbjct 712 AACAACCAGATCGGCTTCACCACCGACCCTCGGATGGCCCGCTCCTCCCCCTACCCCACTGACGTGGCCCGAGT 785
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 786 GGTGAATGCCCCCATTTTCCACGTGAACTCAGATGACCCCGAGGCTGTCATGTACGTGTGCAAAGTGGCGGCCG 859
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 860 AGTGGAGGAGCACCTTCCACAAGGACGTGGTTGTCGATTTGGTGTGTTACCGGCGCAACGGCCACAACGAGATG 933
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 934 GATGAGCCCATGTTCACGCAGCCGCTCATGTACAAGCAGATCCGCAAGCAGAAGCCTGTGTTACAGAAGTACGC 1007
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1008 TGAGCTGCTGGTGTCGCAGGGTGTGGTCAACCAGCCTGAGTATGAGGAGGAAATTTCCAAGTATGATAAGATCT 1081
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1082 GTGAGGAAGCTTTTGCCAGATCTAAAGATGAGAAGATCTTGCACATTAAGCACTGGCTGGACTCTCCCTGGCCT 1155
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1156 GGCTTCTTCACCCTGGACGGGCAGCCCAGGAGCATGTCCTGCCCCTCCACGGGTCTGACGGAGGATATTCTGAC 1229
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1230 ACACATCGGGAATGTGGCTAGTTCTGTGCCTGTGGAAAACTTTACTATTCATGGAGGGCTGAGCCGGATCTTGA 1303
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1304 AGACTCGTGGGGAAATGGTGAAGAACCGGACTGTGGACTGGGCTCTAGCGGAGTACATGGCGTTTGGCTCGCTC 1377
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1378 CTGAAGGAGGGCATCCACATTCGGCTGAGCGGCCAGGACGTGGAGCGGGGCACATTCAGCCACCGCCACCATGT 1451
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1452 GCTCCATGACCAGAATGTGGACAAGAGAACCTGCATCCCCATGAACCATCTCTGGCCCAATCAGGCCCCCTATA 1525
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1526 CTGTGTGCAACAGCTCACTGTCTGAGTACGGCGTGCTGGGCTTTGAGCTGGGCTTCGCCATGGCCAGTCCTAAT 1599
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1600 GCCCTGGTCCTCTGGGAAGCCCAATTTGGTGACTTCCACAACACGGCCCAGTGTATCATCGACCAGTTCATCTG 1673
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1674 CCCGGGACAAGCCAAGTGGGTGCGGCAGAATGGCATCGTGTTGCTGCTGCCCCATGGCATGGAGGGCATGGGTC 1747
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1748 CAGAACATTCCTCCGCCCGCCCAGAGCGGTTCTTGCAGATGTGCAACGATGACCCAGATGTCCTGCCAGACCTT 1821
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1822 AAAGAAGCCAACTTCGACATCAATCAGCTATATGACTGCAATTGGGTTGTTGTCAACTGCTCCACTCCTGGCAA 1895
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1896 CTTCTTCCACGTGCTACGACGCCAGATCCTGCTGCCATTCCGGAAGCCGTTAATTATCTTCACCCCCAAATCCC 1969
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1970 TGTTGCGCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGCTTCCAGGAACCCACTTCCAGCGGGTGATCCCA 2043
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2044 GAAGATGGCCCTGCAGCTCAGAACCCAGAAAATGTCAAAAGGCTTCTCTTCTGCACCGGCAAAGTGTATTATGA 2117
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2118 CCTCACCCGGGAGCGCAAAGCACGCGACATGGTGGGGCAGGTGGCCATCACAAGGATTGAGCAGCTGTCGCCAT 2191
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2192 TCCCCTTTGACCTCCTGCTGAAGGAGGTGCAGAAGTACCCCAATGCTGAGCTGGCCTGGTGCCAGGAGGAGCAC 2265
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2266 AAGAACCAAGGCTACTATGACTACGTGAAGCCAAGACTTCGGACCACCATCAGCCGCGCCAAGCCCGTCTGGTA 2339
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2340 TGCCGGCCGGGACCCAGCGGCTGCTCCAGCCACCGGCAACAAGAAGACCCACCTGACGGAGCTGCAGCGCCTCC 2413
Query 1282 ----------------------------------------- 1281
Sbjct 2414 TGGACACGGCCTTCGACCTGGACGTCTTCAAGAACTTCTCG 2454
