Nucleotide Global Alignment

Description

Query:
TRCN0000479889
Subject:
XM_024446783.1
Aligned Length:
3075
Identities:
646
Gaps:
2415

Alignment

Query    1  ATGTTTCATTTAAGGACTTGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAGACTGTTAAGACATTTTCACA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AAACAGACCAGCAGCAGCTAGGACATTTCAACAGATTCGGTGCTATTCTGCACCTGTTGCTGCTGAGCCCTTTC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TCAGTGGGACTAGTTCGAACTATGTGGAGGAGATGTACTGTGCTTGGCTGGAAAACCCCAAAAGTGTACATAAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TCATGGGACATTTTTTTTCGCAACACGAATGCCGGAGCCCCACCGGGCACTGCCTACCAGAGTCCCCTTCCCCT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GAGCCGAGGCTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TGGAGGACCACCTGGCAGTGCAGTCGCTCATCAGGGCATATCAGATACGAGGGCACCATGTAGCACAGCTGGAC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CCCCTGGGGATTTTGGATGCTGATCTGGACTCCTCCGTGCCCGCTGACATTATCTCATCCACAGACAAACTTGG  518
                            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ----------------ATGCTGATCTGGACTCCTCCGTGCCCGCTGACATTATCTCATCCACAGACAAACTTGG  58

Query  519  GTTCTATGGCCTGGATGAGTCTGACCTCGACAAGGTCTTCCACTTGCCCACCACCACTTTCATCGGGGGACAGG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   59  GTTCTATGGCCTGGATGAGTCTGACCTCGACAAGGTCTTCCACTTGCCCACCACCACTTTCATCGGGGGACAGG  132

Query  593  AATCAGCACTTCCTCTGCGGGAGATCATCCGTCGGCTGGAGATGGCCTACTGCCAGCATATTGGGGTGGAGTTC  666
            |||||||||||||||||||||||||||||||||||||||                                   
Sbjct  133  AATCAGCACTTCCTCTGCGGGAGATCATCCGTCGGCTGG-----------------------------------  171

Query  667  ATGTTCATCAATGACCTGGAGCAGTGCCAGTGGATCCGGCAGAAGTTTGAGACCCCTGGGATCATGCAGTTCAC  740
                                                                                      
Sbjct  172  --------------------------------------------------------------------------  171

Query  741  AAATGAGGAGAAACGGACCCTGCTGGCCAGGCTTGTGCGGTCCACCAGGTTTGAGGAGTTCCTACAGCGGAAGT  814
                                                          ||||||||||||||||||||||||||||
Sbjct  172  ----------------------------------------------AGGTTTGAGGAGTTCCTACAGCGGAAGT  199

Query  815  GGTCCTCTGAGAAGCGCTTTGGTCTAGAAGGCTGCGAGGTACTGATCCCTGCCCTCAAGACCATCATTGACAAG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  200  GGTCCTCTGAGAAGCGCTTTGGTCTAGAAGGCTGCGAGGTACTGATCCCTGCCCTCAAGACCATCATTGACAAG  273

Query  889  TCTAGTGAGAATGGCGTGGACTACGTGATCATGGGCATGCCACACAGAGGGCGGCTGAACGTGCTTGCAAATGT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  274  TCTAGTGAGAATGGCGTGGACTACGTGATCATGGGCATGCCACACAGAGGGCGGCTGAACGTGCTTGCAAATGT  347

Query  963  CATCAGGAAGGAGCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCTGATGAGGGCTCCGGAG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  348  CATCAGGAAGGAGCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCTGATGAGGGCTCCGGAG  421

Query 1037  ATGTGAAGTACCACCTGGGCATGTATCACCGCAGGATCAATCGTGTCACCGACAGGAACATTACCTTGTCCTTG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  422  ATGTGAAGTACCACCTGGGCATGTATCACCGCAGGATCAATCGTGTCACCGACAGGAACATTACCTTGTCCTTG  495

Query 1111  GTGGCCAACCCTTCCCACCTTGAGGCCGCTGACCCCGTGGTGATGGGCAAGACCAAAGCCGAACAGTTTTACTG  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  496  GTGGCCAACCCTTCCCACCTTGAGGCCGCTGACCCCGTGGTGATGGGCAAGACCAAAGCCGAACAGTTTTACTG  569

Query 1185  TGGCGACACTGAAGGGAAAAAGGTAAGGCCCA-----------GAGAGAGGCGTGCA----------AGG----  1233
            ||||||||||||||||||||||||.|.|.|||           | |.||.|| ||||          |||    
Sbjct  570  TGGCGACACTGAAGGGAAAAAGGTCATGTCCATCCTGTTGCATG-GGGATGC-TGCATTTGCTGGCCAGGGCAT  641

Query 1234  ---------------------CAG---------ATC--------GTCAAGGCCCCATGTTCCAGCATGG-----  1264
                                 |||         |||        .|||.|||.||.||   || |.|||     
Sbjct  642  TGTGTACGAGACCTTCCACCTCAGCGACCTGCCATCCTACACAACTCATGGCACCGTG---CA-CGTGGTCGTC  711

Query 1265  -------AGTTCCGC-TCACCAACA-------------------------------------------------  1281
                   ||.||.|| ||||||.|.                                                 
Sbjct  712  AACAACCAGATCGGCTTCACCACCGACCCTCGGATGGCCCGCTCCTCCCCCTACCCCACTGACGTGGCCCGAGT  785

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct  786  GGTGAATGCCCCCATTTTCCACGTGAACTCAGATGACCCCGAGGCTGTCATGTACGTGTGCAAAGTGGCGGCCG  859

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct  860  AGTGGAGGAGCACCTTCCACAAGGACGTGGTTGTCGATTTGGTGTGTTACCGGCGCAACGGCCACAACGAGATG  933

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct  934  GATGAGCCCATGTTCACGCAGCCGCTCATGTACAAGCAGATCCGCAAGCAGAAGCCTGTGTTACAGAAGTACGC  1007

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1008  TGAGCTGCTGGTGTCGCAGGGTGTGGTCAACCAGCCTGAGTATGAGGAGGAAATTTCCAAGTATGATAAGATCT  1081

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1082  GTGAGGAAGCTTTTGCCAGATCTAAAGATGAGAAGATCTTGCACATTAAGCACTGGCTGGACTCTCCCTGGCCT  1155

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1156  GGCTTCTTCACCCTGGACGGGCAGCCCAGGAGCATGTCCTGCCCCTCCACGGGTCTGACGGAGGATATTCTGAC  1229

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1230  ACACATCGGGAATGTGGCTAGTTCTGTGCCTGTGGAAAACTTTACTATTCATGGAGGGCTGAGCCGGATCTTGA  1303

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1304  AGACTCGTGGGGAAATGGTGAAGAACCGGACTGTGGACTGGGCTCTAGCGGAGTACATGGCGTTTGGCTCGCTC  1377

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1378  CTGAAGGAGGGCATCCACATTCGGCTGAGCGGCCAGGACGTGGAGCGGGGCACATTCAGCCACCGCCACCATGT  1451

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1452  GCTCCATGACCAGAATGTGGACAAGAGAACCTGCATCCCCATGAACCATCTCTGGCCCAATCAGGCCCCCTATA  1525

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1526  CTGTGTGCAACAGCTCACTGTCTGAGTACGGCGTGCTGGGCTTTGAGCTGGGCTTCGCCATGGCCAGTCCTAAT  1599

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1600  GCCCTGGTCCTCTGGGAAGCCCAATTTGGTGACTTCCACAACACGGCCCAGTGTATCATCGACCAGTTCATCTG  1673

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1674  CCCGGGACAAGCCAAGTGGGTGCGGCAGAATGGCATCGTGTTGCTGCTGCCCCATGGCATGGAGGGCATGGGTC  1747

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1748  CAGAACATTCCTCCGCCCGCCCAGAGCGGTTCTTGCAGATGTGCAACGATGACCCAGATGTCCTGCCAGACCTT  1821

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1822  AAAGAAGCCAACTTCGACATCAATCAGCTATATGACTGCAATTGGGTTGTTGTCAACTGCTCCACTCCTGGCAA  1895

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1896  CTTCTTCCACGTGCTACGACGCCAGATCCTGCTGCCATTCCGGAAGCCGTTAATTATCTTCACCCCCAAATCCC  1969

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1970  TGTTGCGCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGCTTCCAGGAACCCACTTCCAGCGGGTGATCCCA  2043

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2044  GAAGATGGCCCTGCAGCTCAGAACCCAGAAAATGTCAAAAGGCTTCTCTTCTGCACCGGCAAAGTGTATTATGA  2117

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2118  CCTCACCCGGGAGCGCAAAGCACGCGACATGGTGGGGCAGGTGGCCATCACAAGGATTGAGCAGCTGTCGCCAT  2191

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2192  TCCCCTTTGACCTCCTGCTGAAGGAGGTGCAGAAGTACCCCAATGCTGAGCTGGCCTGGTGCCAGGAGGAGCAC  2265

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2266  AAGAACCAAGGCTACTATGACTACGTGAAGCCAAGACTTCGGACCACCATCAGCCGCGCCAAGCCCGTCTGGTA  2339

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2340  TGCCGGCCGGGACCCAGCGGCTGCTCCAGCCACCGGCAACAAGAAGACCCACCTGACGGAGCTGCAGCGCCTCC  2413

Query 1282  -----------------------------------------  1281
                                                     
Sbjct 2414  TGGACACGGCCTTCGACCTGGACGTCTTCAAGAACTTCTCG  2454

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