Nucleotide Global Alignment

Description

• Query: TRCN0000479986
• Subject: NM_001347480.1
• Aligned Length: 1974
• Identities: 1254
• Gaps: 555

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCACGTTTAACAAAAAGACGACAGGCGGATACAAAAGCTATCCAGCATCTTTGGGCAGCCATTGAAATTAT  74

Query    1  ----------------------------------------------ATGTCTCGAGTCCACGGTATGCACCCTA  28
                                                          |||||.|||||||||||||||||.||.|
Sbjct   75  CAGAAATCAGAAGCAGATTGCCAACATTGATCGTATTACAAAGTATATGTCCCGAGTCCACGGTATGCATCCCA  148

Query   29  AAGAGACCACCCGTCAGCTGAGCTTAGCTGTGAAAGATGGTCTTATTGTCGAAACTCTAACAGTGGGCTGCAAA  102
            |||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AAGAGACCACCCGCCAGCTGAGCTTAGCTGTGAAAGATGGTCTTATTGTCGAAACTCTAACAGTGGGCTGCAAA  222

Query  103  GGTTCAAAAGCTGGTATTGAACAAGAAGGATATTGGTTGCCAGGAGATGAGATTGACTGGGAAACAGAAAATCA  176
            |||||||||||||||||||||||.||||||||||||||.|||||||||||||||                    
Sbjct  223  GGTTCAAAAGCTGGTATTGAACAGGAAGGATATTGGTTACCAGGAGATGAGATT--------------------  276

Query  177  TGACTGGTATTGTTTTGAATGCCATTTGCCTGGAGAGGTGTTGATATGTGACCTGTGTTTTCGTGTGTATCATT  250
                                                                                      
Sbjct  277  --------------------------------------------------------------------------  276

Query  251  CCAAGTGTTTGTCTGATGAGTTCAGGCTTAGAGACAGCAGTAGTCCCTGGCAGTGCCCAGTTTGCAGGAGCATT  324
                                                                                ||||||
Sbjct  277  --------------------------------------------------------------------AGCATT  282

Query  325  AAGAAGAAGAATACAAACAAACAGGAGATGGGCACATACCTCAGATTCATTGTCTCCCGCATGAAGGAGAGGGC  398
            |||||||||.|..|.|||||.|||||.||||||||.|||.|.||.|||||.||||||||.|||||||||.||||
Sbjct  283  AAGAAGAAGCACTCTAACAAGCAGGAAATGGGCACCTACTTGAGGTTCATCGTCTCCCGAATGAAGGAGCGGGC  356

Query  399  TATAGATCTTAATAAAAAGGGGAAGGACAATAAACACCCGATGTACAGGAGGCTGGTGCACTCAGCTGTGGACG  472
            ||||||.||||||||.||.||.|||||||.|||.||.||.||||||.||||||||||.|||||||||||.||||
Sbjct  357  TATAGACCTTAATAAGAAAGGAAAGGACAGTAAGCATCCTATGTACCGGAGGCTGGTCCACTCAGCTGTTGACG  430

Query  473  TTCCCACCATTCAAGAGAAAGTGAATGAAGGGAAATACCGAAGTTATGAAGAGTTCAAAGCTGATGCCCAATTG  546
            |.||.|||||.||||||||.||||||||.|||||.|||||.|||||.||.||||||||.|||||.||.||..||
Sbjct  431  TCCCTACCATACAAGAGAAGGTGAATGAGGGGAAGTACCGGAGTTACGAGGAGTTCAAGGCTGACGCACAGCTG  504

Query  547  CTTCTCCACAATACCGTGATTTTCTATGG---AGACAGTGAGCAAGCTGACATTGCGAGGATGCTATATAAAGA  617
            |||||||||||.||.|||||.||||||||   ||||||||||||.||.||||||||..|||||.||||||||||
Sbjct  505  CTTCTCCACAACACAGTGATCTTCTATGGAGCAGACAGTGAGCAGGCGGACATTGCACGGATGTTATATAAAGA  578

Query  618  CACATGTCATGAGCTGGATGAACTGCAGCTTTGCAAGAATTGCTTTTACTTGTCAAATGCTCGTCCTGACAACT  691
            |||.|||||.||||||||.||.|||||||||||||||||.|||||.||..|||||||.||.||.||.|||||||
Sbjct  579  CACGTGTCACGAGCTGGACGAGCTGCAGCTTTGCAAGAACTGCTTCTATCTGTCAAACGCACGGCCCGACAACT  652

Query  692  GGTTCTGTTATCCTTGTATACCTAATCATGAGCTGGTTTGGGCTAAAATGAAAGGTTTTGGGTTTTGGCCAGCC  765
            |||||||.||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  653  GGTTCTGCTACCCTTGCATACCTAATCATGAGCTGGTTTGGGCTAAAATGAAAGGTTTTGGGTTTTGGCCAGCC  726

Query  766  AAAGTCATGCAGAAAGAAGACAATCAAGTCGACGTTCGCTTCTTTGGCCACCACCACCAGAGGGCCTGGATTCC  839
            |||||||||||||||||||||||||||||.||.|||||||||||||||||.|||||||||||.|||||||||||
Sbjct  727  AAAGTCATGCAGAAAGAAGACAATCAAGTGGATGTTCGCTTCTTTGGCCATCACCACCAGAGAGCCTGGATTCC  800

Query  840  TTCTGAAAACATTCAAGATATCACAGTCAACATTCATCGGCTGCACGTGAAGCGCAGTATGGGTTGGAAAAAGG  913
            ||||||||||||.||.||||||||.|||||..||||.||.|||||||||||||||||.|||||.|||||.||||
Sbjct  801  TTCTGAAAACATCCAGGATATCACGGTCAATGTTCACCGACTGCACGTGAAGCGCAGCATGGGCTGGAAGAAGG  874

Query  914  CCTGTGATGAGCTGGAGCTGCATCAGCGTTTCCTACGAGAAGGGAGATTTTGGAAATCTAAGAATGAGGACCGA  987
            |||||||.||||||||.|||||||||||.|||||.||.|||||.||.||.|||||.||||||||||||||||||
Sbjct  875  CCTGTGACGAGCTGGAACTGCATCAGCGCTTCCTCCGTGAAGGAAGGTTCTGGAAGTCTAAGAATGAGGACCGA  948

Query  988  GGTGAGGAAGAGGCAGAATCCAGTATCTCCTCCACCAGTAATGAGCAGCTAAAGGTCACTCAAGAACCAAGAGC  1061
            |||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||||||||.||||||||
Sbjct  949  GGTGAGGAAGAGGCAGAATCCAGTATCTCCTCCACCAGTAACGAGCAGCTGAAGGTCACTCAAGAGCCAAGAGC  1022

Query 1062  AAAGAAAGGACGACGTAATCAAAGTGTGGAGCCCAAAAAGGA--------------------------------  1103
            |||||||||||||||||||||.||||||||||||||||||||                                
Sbjct 1023  AAAGAAAGGACGACGTAATCAGAGTGTGGAGCCCAAAAAGGAAGTAAGTTGCCCGCCTCACAGTGTCCAGGTGG  1096

Query 1104  --------------------------------------------------------------------------  1103
                                                                                      
Sbjct 1097  CAATCGAAAGAGGAAAGAGTCTCAAAGTACGCTCAAGACAGTCAAGTAATATCCGTCAAGTTAAGGCCCAGTCT  1170

Query 1104  --------------------------------------------------------------AGAACCAGAGCC  1115
                                                                          ||||||.|||||
Sbjct 1171  CCCGACTCCTGTCGTTGTGGACTGCTGCTCGACCAGCACGCCAGTGCACAGTCTCCGTCCCCAGAACCCGAGCC  1244

Query 1116  TGAAACAGAAGCAGTAAGTTCTAGCCAGGAAATACCCACGATGCCTCAGCCCATCGAAAAAGTCTCCGTGTCAA  1189
            .|||||.||||||||.|||||.|||||||||||.|||||.|||||||||||.||.||.|..||.||.|||||||
Sbjct 1245  AGAAACGGAAGCAGTGAGTTCCAGCCAGGAAATCCCCACAATGCCTCAGCCAATTGAGAGGGTGTCAGTGTCAA  1318

Query 1190  CTCAGACAAAGAAGTTAAGTGCCTCTTCACCAAGAATGCTGCATCGGAGCACCCAGACCACAAACGACGGCGTG  1263
            |.|||||.||||||||||||||||||||.|||.|||||||||||||.|||||.|||||.||.|.|||||||||.
Sbjct 1319  CCCAGACCAAGAAGTTAAGTGCCTCTTCCCCACGAATGCTGCATCGAAGCACTCAGACGACGAGCGACGGCGTC  1392

Query 1264  TGTCAGAGCATGTGCCATGACAAATACACCAAGATCTTCAATGACTTCAAAGACCGGATGAAGTCGGACCACAA  1337
            |||||||||||||||||.|||||.||||||||.||.||.||||||||.||||||.|||||||||||||||||||
Sbjct 1393  TGTCAGAGCATGTGCCACGACAAGTACACCAAAATTTTTAATGACTTTAAAGACAGGATGAAGTCGGACCACAA  1466

Query 1338  GCGGGAGACAGAGCGTGTTGTCCGAGAAGCTCTGGAGAAGCTGCGTTCTGAAATGGAAGAAGAAAAGAGACAAG  1411
            ||||||.||||||.|.||.|||||.|||||.|||||.|||.|||||||||||||||||||||||||.|||||.|
Sbjct 1467  GCGGGAAACAGAGAGAGTGGTCCGTGAAGCGCTGGAAAAGTTGCGTTCTGAAATGGAAGAAGAAAAAAGACAGG  1540

Query 1412  CTGTAAATAAAGCTGTAGCCAACATGCAGGGTGAGATGGACAGAAAATGTAAGCAAGTAAAGGAAAAGTGTAAG  1485
            |.||.||.||||||||.||||.|.|||||||.||.|||||||||||..|||||||..|.|||||.|||||.|||
Sbjct 1541  CCGTGAACAAAGCTGTGGCCAGCCTGCAGGGCGACATGGACAGAAAGGGTAAGCAGCTGAAGGAGAAGTGCAAG  1614

Query 1486  GAAGAATTTGTAGAAGAAATCAAGAAGCTGGCAACACAGCACAAGCAACTGATTTCTCAGACCAAGAAGAAGCA  1559
            |||||.||||||||.||.|||||||||||.||..|.|||||||||||.||.|||||.|||||||||||||||||
Sbjct 1615  GAAGAGTTTGTAGAGGAGATCAAGAAGCTAGCGGCGCAGCACAAGCAGCTCATTTCCCAGACCAAGAAGAAGCA  1688

Query 1560  GTGG----------GT------------AAATACCA---------------GTCTTTTT---------------  1581
            ||||          ||            |..|||||               |||.|..|               
Sbjct 1689  GTGGTGCTACAACTGTGAGGAGGAGGCCATGTACCACTGCTGCTGGAACACGTCCTACTGCTCCATCAAGTGCC  1762

Query 1582  --------------------------------------------------  1581
                                                              
Sbjct 1763  AGCAGGAGCACTGGCACGCAGAGCACAAGCGCACCTGCCGCCGGAAGAGA  1812