Nucleotide Global Alignment

Description

• Query: TRCN0000480030
• Subject: XR_001740256.2
• Aligned Length: 3926
• Identities: 2817
• Gaps: 1106

Alignment

Query    1  ---------------------------------ATGGCTCGGAAACGCGCGGCCGGCGGGGAGCCGCGGGGACG  41
                                             |||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ACTCGCGAAGTGGAATTTGCCCAGACAAGCAACATGGCTCGGAAACGCGCGGCCGGCGGGGAGCCGCGGGGACG  74

Query   42  CGAACTGCGCAGCCAGAAATCCAAGGCCAAGAGCAAGGCCCGGCGTGAGGAGGAGGAGGAGGATGCCTTTGAAG  115
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGAACTGCGCAGCCAGAAATCCAAGGCCAAGAGCAAGGCCCGGCGTGAGGAGGAGGAGGAGGATGCCTTTGAAG  148

Query  116  ATGAGAAACCCCCAAAGAAGAGCCTTCTCTCCAAAGTTTCACAAGGAAAGAGGAAAAGAGGCTGCAGTCATCCT  189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATGAGAAACCCCCAAAGAAGAGCCTTCTCTCCAAAGTTTCACAAGGAAAGAGGAAAAGAGGCTGCAGTCATCCT  222

Query  190  GGGGGTTCAGCAGATGGTCCAGCAAAAAAGAAAGTGGCCAAGGTGACTGTTAAATCTGAAAACCTCAAGGTTAT  263
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GGGGGTTCAGCAGATGGTCCAGCAAAAAAGAAAGTGGCCAAGGTGACTGTTAAATCTGAAAACCTCAAGGTTAT  296

Query  264  AAAGGATGAAGCCCTCAGCGATGGGGATGACCTCAGGGACTTTCCAAGTGACCTCAAGAAGGCACACCATCTGA  337
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AAAGGATGAAGCCCTCAGCGATGGGGATGACCTCAGGGACTTTCCAAGTGACCTCAAGAAGGCACACCATCTGA  370

Query  338  AGAGAGGGGCTACCATGAATGAAGACAGCAATGAAGAAGAGGAAGAAAGTGAAAATGATTGGGAAGAGGTTGAA  411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGAGAGGGGCTACCATGAATGAAGACAGCAATGAAGAAGAGGAAGAAAGTGAAAATGATTGGGAAGAGGTTGAA  444

Query  412  GAACTTAGTGAGCCTGTGCTGGGTGACGTGAGAGAAAGTACAGCCTTCTCTCGATCTCTTCTGCCTGTGAAGCC  485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAACTTAGTGAGCCTGTGCTGGGTGACGTGAGAGAAAGTACAGCCTTCTCTCGATCTCTTCTGCCTGTGAAGCC  518

Query  486  AGTGGAGATAGAGATTGAAACGCCAGAGCAGGCGAAGACAAGAGAAAGAAGTGAAAAGATAAAACTGGAGTTTG  559
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGTGGAGATAGAGATTGAAACGCCAGAGCAGGCGAAGACAAGAGAAAGAAGTGAAAAGATAAAACTGGAGTTTG  592

Query  560  AGACATATCTTCGGAGGGCGATGAAACGTTTCAATAAAGGGGTCCATGAGGACACACACAAGGTTCACCTTCTC  633
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGACATATCTTCGGAGGGCGATGAAACGTTTCAATAAAGGGGTCCATGAGGACACACACAAGGTTCACCTTCTC  666

Query  634  TGCCTGCTAGCAAATGGCTTCTATCGAAATAACATCTGCAGCCAGCCAGATCTGCATGCTATTGGCCTGTCCAT  707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGCCTGCTAGCAAATGGCTTCTATCGAAATAACATCTGCAGCCAGCCAGATCTGCATGCTATTGGCCTGTCCAT  740

Query  708  CATCCCAGCCCGCTTTACCAGAGTGCTGCCTCGAGATGTGGACACCTACTACCTCTCAAACCTGGTGAAGTGGT  781
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CATCCCAGCCCGCTTTACCAGAGTGCTGCCTCGAGATGTGGACACCTACTACCTCTCAAACCTGGTGAAGTGGT  814

Query  782  TCATTGGAACATTTACAGTTAATGCAGAACTTTCAGCCAGTGAACAAGATAACCTGCAGACTACATTGGAAAGG  855
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TCATTGGAACATTTACAGTTAATGCAGAACTTTCAGCCAGTGAACAAGATAACCTGCAGACTACATTGGAAAGG  888

Query  856  AGATTTGCTATTTACTCTGCTCGAGATGATGAGGAATTGGTCCATATATTCTTACTGATTCTCCGGGCTCTGCA  929
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGATTTGCTATTTACTCTGCTCGAGATGATGAGGAATTGGTCCATATATTCTTACTGATTCTCCGGGCTCTGCA  962

Query  930  GCTCTTGACCCGGCTGGTATTGTCTCTACAGCCAATTCCTCTGAAGTCAGCAACAGCAAAGGGAAAGAAACCTT  1003
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GCTCTTGACCCGGCTGGTATTGTCTCTACAGCCAATTCCTCTGAAGTCAGCAACAGCAAAGGGAAAGAAACCTT  1036

Query 1004  CCAAGGAAAGATTGACTGCGGATCCAGGAGGCTCCTCAGAAACTTCCAGCCAAGTTCTAGAAAACCACACCAAA  1077
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CCAAGGAAAGATTGACTGCGGATCCAGGAGGCTCCTCAGAAACTTCCAGCCAAGTTCTAGAAAACCACACCAAA  1110

Query 1078  CCAAAGACCAGCAAAGGAACCAAACAAGAGGAAACCTTTGCTAAGGGCACCTGCAGGCCAAGTGCCAAAGGGAA  1151
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CCAAAGACCAGCAAAGGAACCAAACAAGAGGAAACCTTTGCTAAGGGCACCTGCAGGCCAAGTGCCAAAGGGAA  1184

Query 1152  GAGGAACAAGGGAGGCAGAAAGAAACGGAGCAAGCCCTCCTCCAGCGAGGAAGATGAGGGCCCAGGAGACAAGC  1225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GAGGAACAAGGGAGGCAGAAAGAAACGGAGCAAGCCCTCCTCCAGCGAGGAAGATGAGGGCCCAGGAGACAAGC  1258

Query 1226  AGGAGAAGGCAACCCAGCGACGTCCGCATGGCCGGGAGCGGCGGGTGGCCTCCAGGGTGTCTTATAAAGAGGAG  1299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AGGAGAAGGCAACCCAGCGACGTCCGCATGGCCGGGAGCGGCGGGTGGCCTCCAGGGTGTCTTATAAAGAGGAG  1332

Query 1300  AGTGGGAGTGATGAGGCTGGCAGCGGCTCTGATTTTGAGCTCTCCAGTGGAGAAGCCTCTGATCCCTCTGATGA  1373
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AGTGGGAGTGATGAGGCTGGCAGCGGCTCTGATTTTGAGCTCTCCAGTGGAGAAGCCTCTGATCCCTCTGATGA  1406

Query 1374  GGATTCCGAACCTGGCCCTCCAAAGCAGAGGAAAGCCCCCGCTCCTCAGAGGACAAAGGCTGGGTCCAAGAGTG  1447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GGATTCCGAACCTGGCCCTCCAAAGCAGAGGAAAGCCCCCGCTCCTCAGAGGACAAAGGCTGGGTCCAAGAGTG  1480

Query 1448  CCTCCAGGACCCATCGTGGGAGCCATCGTAAGGACCCAAGCTTGCCAGCGGCATCCTCAAGCTCTTCAAGCAGT  1521
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CCTCCAGGACCCATCGTGGGAGCCATCGTAAGGACCCAAGCTTGCCAGCGGCATCCTCAAGCTCTTCAAGCAGT  1554

Query 1522  AAAAGAGGCAAGAAAATGTGCAGCGATGGTGAGAAGGCAGAAAAAAGAAGCATAGCTGGTATAGACCAGTGGCT  1595
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AAAAGAGGCAAGAAAATGTGCAGCGATGGTGAGAAGGCAGAAAAAAGAAGCATAGCTGGTATAGACCAGTGGCT  1628

Query 1596  AGAGGTGTTCTGTGAGCAGGAGGAAAAGTGGGTATGTGTAGACTGTGTGCACGGTGTGGTGGGCCAGCCTCTGA  1669
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AGAGGTGTTCTGTGAGCAGGAGGAAAAGTGGGTATGTGTAGACTGTGTGCACGGTGTGGTGGGCCAGCCTCTGA  1702

Query 1670  CCTGTTACAAGTACGCCACCAAGCCCATGACCTATGTGGTGGGCATTGACAGTGACGGCTGGGTCCGAGATGTC  1743
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  CCTGTTACAAGTACGCCACCAAGCCCATGACCTATGTGGTGGGCATTGACAGTGACGGCTGGGTCCGAGATGTC  1776

Query 1744  ACACAGAGGTACGACCCAGTCTGGATGACAGTGACCCGCAAGTGCCGGGTTGATGCTGAGTGGTGGGCCGAGAC  1817
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  ACACAGAGGTACGACCCAGTCTGGATGACAGTGACCCGCAAGTGCCGGGTTGATGCTGAGTGGTGGGCCGAGAC  1850

Query 1818  CTTGAGACCATACCAGAGCCCATTTATGGACAGGGAGAAGAAAGAAGACTTGGAGTTTCAGGCAAAACACATGG  1891
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 1851  CTTGAGACCATACCAGAGCCCATTTATGGACAGGGAGAAGAAAGAAGACTTGGAGTTTCAGGCTAAACACATGG  1924

Query 1892  ACCAGCCTTTGCCCACTGCCATTGGCTTATATAAGAACCACCCTCTGTATGCCCTGAAGCGGCATCTCCTGAAA  1965
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  ACCAGCCTTTGCCCACTGCCATTGGCTTATATAAGAACCACCCTCTGTATGCCCTGAAGCGGCATCTCCTGAAA  1998

Query 1966  TATGAGGCCATCTATCCCGAGACAGCTGCCATCCTTGGGTATTGTCGTGGAGAAGCGGTCTACTCCAGGGATTG  2039
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  TATGAGGCCATCTATCCCGAGACAGCTGCCATCCTTGGGTATTGTCGTGGAGAAGCGGTCTACTCCAGGGATTG  2072

Query 2040  TGTGCACACTCTGCATTCCAGAGACACGTGGCTGAAGAAAGCAAGAGTGGTGAGGCTTGGAGAAGTACCCTACA  2113
            |||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  TGTGCACACTCTGCATTCCAGGGACACGTGGCTGAAGAAAGCAAGAGTGGTGAGGCTTGGAGAAGTACCCTACA  2146

Query 2114  AGATGGTGAAAGGCTTTTCTAACCGTGCTCGGAAAGCCCGACTTGCTGAGCCCCAGCTGCGGGAAGAAAATGAC  2187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  AGATGGTGAAAGGCTTTTCTAACCGTGCTCGGAAAGCCCGACTTGCTGAGCCCCAGCTGCGGGAAGAAAATGAC  2220

Query 2188  CTGGGCCTGTTTGGCTACTGGCAGACAGAGGAGTATCAGCCCCCAGTGGCCGTGGACGGGAAGGTGCCCCGGAA  2261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  CTGGGCCTGTTTGGCTACTGGCAGACAGAGGAGTATCAGCCCCCAGTGGCCGTGGACGGGAAGGTGCCCCGGAA  2294

Query 2262  CGAGTTTGGGAATGTGTACCTCTTCCTGCCCAGCATGATGCCTATTGGCTGTGTCCAGCTGAACCTGCCCAATC  2335
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  CGAGTTTGGGAATGTGTACCTCTTCCTGCCCAGCATGATGCCTATTGGCTGTGTCCAGCTGAACCTGCCCAATC  2368

Query 2336  TACACCGCGTGGCCCGCAAGCTGGACATCGACTGTGTCCAGGCCATCACTGGCTTTGATTTCCATGGCGGCTAC  2409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  TACACCGCGTGGCCCGCAAGCTGGACATCGACTGTGTCCAGGCCATCACTGGCTTTGATTTCCATGGCGGCTAC  2442

Query 2410  TCCCATCCCGTGACTGATGGATACATCGTCTGCGAGGAATTCAAAGACGTGCTCCTGACTGCCTGGGAAAATGA  2483
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  TCCCATCCCGTGACTGATGGATACATCGTCTGCGAGGAATTCAAAGACGTGCTCCTGACTGCCTGGGAAAATGA  2516

Query 2484  GCAGGCAGTCATTGAAAGGAAGGAGAAGG---------------------------------------------  2512
            |||||||||||||||||||||||||||||                                             
Sbjct 2517  GCAGGCAGTCATTGAAAGGAAGGAGAAGGAGGCCGCCTCCGTGTGCTCCCAGGCTCTTCCCAGCCCTCTCTGAC  2590

Query 2513  --------------------------------------------------------------------------  2512
                                                                                      
Sbjct 2591  ATCATGGCAGGCACCCGAGGGAGCGAGCACTGAATACAGCAGGCTCCTGCCCACCCCGCAGACTATCACTGTCC  2664

Query 2513  --------------------------------------------------------------------------  2512
                                                                                      
Sbjct 2665  CTGAGGAGCCTGGGTCCGGGCTCTGGGGTCTACTGCCCCTGCTGCCCACACCTGCCTCTGTCTTGAATTGCCTG  2738

Query 2513  --------------------------------------------------------------------------  2512
                                                                                      
Sbjct 2739  TGTCCAGGTTCTGGAAGACCTCACCCACTAAAGATTTTGGAGTCAGTAACGATTAAAAAGTTATCTGTTTTTGT  2812

Query 2513  -------AGAAAAAGGAGAAGCGGGCTCTAGGGAACTGGAAGTTGCTGGCCAAAGGTCTGCTCATCAGGGAGAG  2579
                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813  GGCTTTCAGAAAAAGGAGAAGCGGGCTCTAGGGAACTGGAAGTTGCTGGCCAAAGGTCTGCTCATCAGGGAGAG  2886

Query 2580  GCTGAAGCGTCGCTACGGGCCCAAGAGTGAGGCAGCAGCTCCCCACACAGATGCAGGAGGTGGACTCTCTTCTG  2653
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887  GCTGAAGCGTCGCTACGGGCCCAAGAGTGAGGCAGCAGCTCCCCACACAGATGCAGGAGGTGGACTCTCTTCTG  2960

Query 2654  ATGAAGAGGAGGGGACCAGCTCTCAAGCAGAAGCGGCCAGGATACTGGCTGCCTCCTGGCCTCAAAACCGAGAA  2727
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961  ATGAAGAGGAGGGGACCAGCTCTCAAGCAGAAGCGGCCAGGATACTGGCTGCCTCCTGGCCTCAAAACCGAGAA  3034

Query 2728  GATGAAGAAAAGCAGAAGCTGAAGGGTGGGCCCAAGAAGACCAAAAGGGAAAAGAAAGCAGCAGCTTCCCACCT  2801
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035  GATGAAGAAAAGCAGAAGCTGAAGGGTGGGCCCAAGAAGACCAAAAGGGAAAAGAAAGCAGCAGCTTCCCACCT  3108

Query 2802  GTTCCCATTTGAGAAGCTG-------------------------------------------------------  2820
            |||||||||||||.|||||                                                       
Sbjct 3109  GTTCCCATTTGAGCAGCTGTGAGCTGAGCGCCCACTAGAGGGGCACCCACCAGTTGCTGCTGCCCCACTACAGG  3182

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 3183  CCCCACACCTGCCCTGGGCATGCCCAGCCCCTGGTGGTGGGGGCTTCTCTGCTGAGAAGGCAAACTGAGGCAGC  3256

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 3257  ATGCACGGAGGCGGGGTCAGGGGAGACGAGGCCAAGCTGAGGAGGTGCTGCAGGTCCCGTCTGGCTCCAGCCCT  3330

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 3331  TGTCAGATTCACCCAGGGTGAAGCCTTCAAAGCTTTTTGCTACCAAAGCCCACTCACCCTTTGAGCTACAGAAC  3404

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 3405  ACTTTGCTAGGAGATACTCTTCTGCCTCCTAGACCTGTTCTTTCCATCTTTAGAAACATCAGTTTTTGTATGGA  3478

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 3479  AGCCACCGGGAGATTTCTGGATGGTGGTGCATCCGTGAATGCGCTGATCGTTTCTTCCAGTTAGAGTCTTCATC  3552

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 3553  TGTCCGACAAGTTCACTCGCCTCGGTTGCGGACCTAGGACCATTTCTCTGCAGGCCACTTACCTTCCCCTGAGT  3626

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 3627  CAGGCTTACTAATGCTGCCCTCACTGCCTCTTTGCAGTAGGGGAGAGAGCAGAGAAGTACAGGTCATCTGCTGG  3700

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 3701  GATCTAGTTTTCCAAGTAACATTTTGTGGTGACAGAAGCCTAAAAAAAGCTAAAATCAGGAAAGAAAAGGAAAA  3774

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 3775  ATACGAATTGAAAATTAAGGAAATGTTAGTAAAATAGATGAGTGTTAAACTAGATTGTATTCATTACTAGATAA  3848

Query 2821  --------------------------------------------------------------------------  2820
                                                                                      
Sbjct 3849  AATGTATAAAGCTCTCTGTACTAAGGAGAAATGACTTTTATAACATTTTGAGAAAATAATAAAGCATTTATCTA  3922

Query 2821  ----  2820
                
Sbjct 3923  AAGA  3926