Nucleotide Global Alignment

Description

• Query: TRCN0000480060
• Subject: NM_001300865.2
• Aligned Length: 1502
• Identities: 1144
• Gaps: 331

Alignment

Query    1  ATGGTGGACCTGGCGAACGAAGAAAAGCCTGCCATTGCTCCGCCCGTCTTTGTGTTTCAGAAGGATAAAGGACA  74
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGGACCTGGCGAACGAAGAAAAGCCTGCCATTGCTCCGCCCGTCTTTGTGTTTCAGAAGGATAAAGGACA  74

Query   75  AAAGAGGTCAGCTGGCGGCTCCAGTCCTGAAGGCGGAGAAGATTCTGACAGAGAAGATGGAAATTACTGCCCTC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AAAGAGGTCAGCTGGCGGCTCCAGTCCTGAAGGCGGAGAAGATTCTGACAGAGAAGATGGAAATTACTGCCCTC  148

Query  149  CTGTCAAGCGAGAAAGAACATCCTCTTTAACCCAGTTCCCACCCTCACAGTCAGAGGAAAGGAGCAGTGGCTTC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CTGTCAAGCGAGAAAGAACATCCTCTTTAACCCAGTTCCCACCCTCACAGTCAGAGGAAAGGAGCAGTGGCTTC  222

Query  223  CGGTTGAAGCCACCAACGCTGATCCACGGCCAAGCCCCCAGCGCAGGTCTGCCAAGCCAGAAGCCCAAGGAGCA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CGGTTGAAGCCACCAACGCTGATCCACGGCCAAGCCCCCAGCGCAGGTCTGCCAAGCCAGAAGCCCAAGGAGCA  296

Query  297  GCAGCGGAGCGTGCTTCGCCCGGCAGTGTTACAAGCTCCGCAGCCAAAGGCGCTGTCCCAGACTGTCCCCAGCA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCAGCGGAGCGTGCTTCGCCCGGCAGTGTTACAAGCTCCGCAGCCAAAGGCGCTGTCCCAGACTGTCCCCAGCA  370

Query  371  GTGGCACCAACGGGGTCAGCCTCCCAGCAGACTGCACGGGGGCAGTGCCCGCAGCATCCCCTGACACTGCTGCA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GTGGCACCAACGGGGTCAGCCTCCCAGCAGACTGCACGGGGGCAGTGCCCGCAGCATCCCCTGACACTGCTGCA  444

Query  445  TGGAGAAGTCCTTCCGAAGCTGCCGATGAGGTGTGTGCACTTGAGGAGAAAGAGCCCCAGAAAAATGAGTCCAG  518
            ||||||||||||||||||||||||||               |||||||||||||||||||||||||||||||||
Sbjct  445  TGGAGAAGTCCTTCCGAAGCTGCCGA---------------TGAGGAGAAAGAGCCCCAGAAAAATGAGTCCAG  503

Query  519  CAATGCCTCTGAAGAGGAAGCCTGTGAGAAAAAAGACCCCGCCACACAGCAAGCCTTTGTATTTGGGCAGAACT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  504  CAATGCCTCTGAAGAGGAAGCCTGTGAGAAAAAAGACCCCGCCACACAGCAAGCCTTTGTATTTGGGCAGAACT  577

Query  593  TGAGGGACAGAGTTAAGCTGATAAATGAGAGCGTGGACGAAGCCGACATGGAGAATGCTGGACACCCCAGCGCA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  578  TGAGGGACAGAGTTAAGCTGATAAATGAGAGCGTGGACGAAGCCGACATGGAGAATGCTGGACACCCCAGCGCA  651

Query  667  GACACGCCAACCGCAACGAACTATTTCCTCCAGTATATCAGTTCCAGTTTAGAGAACTCAACCAATAGTGCCGA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  652  GACACGCCAACCGCAACGAACTATTTCCTCCAGTATATCAGTTCCAGTTTAGAGAACTCAACCAATAGTGCCGA  725

Query  741  CGCCTCCAGCAACAAATTTGTATTTGGCCAGAACATGAGCGAGCGAGTTTTGAGCCCCCCAAAATTAAACGAGG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  726  CGCCTCCAGCAACAAATTTGTATTTGGCCAGAACATGAGCGAGCGAGTTTTGAGCCCCCCAAAATTAAACGAGG  799

Query  815  TCAGTTCAGATGCCAACAGGGAAAATGCAGCTGCCGAGTCAGGGTCTGAGTCCTCGTCCCAGGAGGCCACCCCT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  800  TCAGTTCAGATGCCAACAGGGAAAATGCAGCTGCCGAGTCAGGGTCTGAGTCCTCGTCCCAGGAGGCCACCCCT  873

Query  889  GAGAAAGAGTCCCTGGCTGAGTCGGCAGCCGCCTACACCAAGGCAACAGCGCGGAAGTGTTTGTTGGAAAAAGT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  874  GAGAAAGAGTCCCTGGCTGAGTCGGCAGCCGCCTACACCAAGGCAACAGCGCGGAAGTGTTTGTTGGAAAAAGT  947

Query  963  GGAAGTCATCACCGGGGAGGAGGCGGAGAGCAATGTGTTACAGATGCAGTGCAAGCTGTTTGTCTTTGACAAGA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  948  GGAAGTCATCACCGGGGAGGAGGCGGAGAGCAATGTGTTACAGATGCAGTGCAAGCTGTTTGTCTTTGACAAGA  1021

Query 1037  CCTCACAGTCCT------------------GGCTTCTCCG-----------------CCACC--------CACA  1067
            ||||||||||||                  ||||.|||.|                 |||||        ||||
Sbjct 1022  CCTCACAGTCCTGGGTGGAGAGAGGCCGGGGGCTGCTCAGACTCAATGACATGGCGTCCACCGATGACGGCACA  1095

Query 1068  C----------------------------------CCT--------TCC----CACCCTGCTGTGGGGCCC---  1092
            |                                  |||        |||    ||||..||||| ||||||   
Sbjct 1096  CTACAGTCCCGACTAGTGATGCGGACCCAGGGGAGCCTGCGACTGATCCTCAACACCAAGCTGT-GGGCCCAGA  1168

Query 1093  -------------TGCCTTTGTGGGGAGCA---GC----CAGCCCTCTGCCCC--TGCCCAGGGC---------  1135
                         .|||...|.|..|||||   ||    |||||.|...|.||  .|.|||||||         
Sbjct 1169  TGCAGATCGACAAGGCCAGCGAGAAGAGCATTCGCATCACAGCCATGGACACCGAGGACCAGGGCGTGAAGGTC  1242

Query 1136  -TCC---------CCAACT--------ATAGG------------------------------CCTGGGACCCCC  1161
             |||         |||.||        |.|||                              |||||   |||.
Sbjct 1243  TTCCTGATCTCGGCCAGCTCCAAGGACACAGGTCAGTTGTATGCAGCCCTGCACCACCGCATCCTGG---CCCT  1313

Query 1162  GCCCA---GCTTGG--------------------------------------GGGGCTGC----TCGTACGAGT  1190
            ||.||   ||.|||                                      |||||.||    ||..||||| 
Sbjct 1314  GCGCAGCCGCGTGGAGCAGGAGCAGGAGGCCAAGATGCCCGCGCCTGAGCCTGGGGCAGCCCCATCCAACGAG-  1386

Query 1191  G-------------------------------------------------------------------------  1191
            |                                                                         
Sbjct 1387  GAGGACGACAGCGACGATGACGATGTCCTGGCTCCTTCAGGGGCCACCGCAGCTGGTGCTGGTGACGAAGGGGA  1460

Query 1192  ----------------------  1191
                                  
Sbjct 1461  CGGGCAGACGACCGGGAGCACA  1482