Construct: ORF TRCN0000480060

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012805.1_s317c1
Derived from:
ccsbBroadEn_13995
DNA Barcode:
TACAGAACTGGTGAATCAAGTAAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RANBP3 (8498)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480060
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8498 RANBP3 RAN binding protein 3 NM_007320.3 77.1% 65.8% (many diffs)
2 human 8498 RANBP3 RAN binding protein 3 NM_001300865.2 76.1% 64.9% (many diffs)
3 human 8498 RANBP3 RAN binding protein 3 NM_007322.3 67.9% 58.4% (many diffs)
4 human 8498 RANBP3 RAN binding protein 3 NM_003624.3 67% 57.6% (many diffs)
5 human 8498 RANBP3 RAN binding protein 3 XM_006722928.1 34.6% 26.3% (many diffs)
6 human 8498 RANBP3 RAN binding protein 3 XM_006722929.1 34.6% 26.3% (many diffs)
7 human 8498 RANBP3 RAN binding protein 3 XM_011528392.1 34.6% 26.3% (many diffs)
8 human 8498 RANBP3 RAN binding protein 3 XM_011528393.2 34.6% 26.3% (many diffs)
9 human 8498 RANBP3 RAN binding protein 3 XM_011528394.1 34.6% 26.3% (many diffs)
10 human 8498 RANBP3 RAN binding protein 3 XM_024451749.1 34.6% 26.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1257
ORF length:
1191
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggt ggacctggcg aacgaagaaa agcctgccat tgctccgccc gtctttgtgt
121ttcagaagga taaaggacaa aagaggtcag ctggcggctc cagtcctgaa ggcggagaag
181attctgacag agaagatgga aattactgcc ctcctgtcaa gcgagaaaga acatcctctt
241taacccagtt cccaccctca cagtcagagg aaaggagcag tggcttccgg ttgaagccac
301caacgctgat ccacggccaa gcccccagcg caggtctgcc aagccagaag cccaaggagc
361agcagcggag cgtgcttcgc ccggcagtgt tacaagctcc gcagccaaag gcgctgtccc
421agactgtccc cagcagtggc accaacgggg tcagcctccc agcagactgc acgggggcag
481tgcccgcagc atcccctgac actgctgcat ggagaagtcc ttccgaagct gccgatgagg
541tgtgtgcact tgaggagaaa gagccccaga aaaatgagtc cagcaatgcc tctgaagagg
601aagcctgtga gaaaaaagac cccgccacac agcaagcctt tgtatttggg cagaacttga
661gggacagagt taagctgata aatgagagcg tggacgaagc cgacatggag aatgctggac
721accccagcgc agacacgcca accgcaacga actatttcct ccagtatatc agttccagtt
781tagagaactc aaccaatagt gccgacgcct ccagcaacaa atttgtattt GGCCAGAACA
841TGAGCGAGCG AGTTTTGAGC CCCCCAAAAT TAAACGAGGT CAGTTCAGAT GCCAACAGGG
901AAAATGCAGC TGCCGAGTCA GGGTCTGAGT CCTCGTCCCA GGAGGCCACC CCTGAGAAAG
961AGTCCCTGGC TGAGTCGGCA GCCGCCTACA CCAAGGCAAC AGCGCGGAAG TGTTTGTTGG
1021AAAAAGTGGA AGTCATCACC GGGGAGGAGG CGGAGAGCAA TGTGTTACAG ATGCAGTGCA
1081AGCTGTTTGT CTTTGACAAG ACCTCACAGT CCTGGCTTCT CCGCCACCCA CACCCTTCCC
1141ACCCTGCTGT GGGGCCCTGC CTTTGTGGGG AGCAGCCAGC CCTCTGCCCC TGCCCAGGGC
1201TCCCCAACTA TAGGCCTGGG ACCCCCGCCC AGCTTGGGGG GCTGCTCGTA CGAGTGTACC
1261CAACTTTCTT GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC
1321TCGATTCTAC GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT
1381ATATATCTTG TGGAAAGGAC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGATACA
1441GAACTGGTGA ATCAAGTAAC ACGCGTTAAG TCgacaatca acctctggat tacaaaattt
1501gtgaaagatt

Download FASTA (ORF) (Full)