Nucleotide Global Alignment

Description

Query:
TRCN0000480060
Subject:
XM_006722928.1
Aligned Length:
1502
Identities:
521
Gaps:
955

Alignment

Query    1  ATGGTGGACCTGGCGAACGAAGAAAAGCCTGCCATTGCTCCGCCCGTCTTTGTGTTTCAGAAGGATAAAGGACA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AAAGAGGTCAGCTGGCGGCTCCAGTCCTGAAGGCGGAGAAGATTCTGACAGAGAAGATGGAAATTACTGCCCTC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CTGTCAAGCGAGAAAGAACATCCTCTTTAACCCAGTTCCCACCCTCACAGTCAGAGGAAAGGAGCAGTGGCTTC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CGGTTGAAGCCACCAACGCTGATCCACGGCCAAGCCCCCAGCGCAGGTCTGCCAAGCCAGAAGCCCAAGGAGCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GCAGCGGAGCGTGCTTCGCCCGGCAGTGTTACAAGCTCCGCAGCCAAAGGCGCTGTCCCAGACTGTCCCCAGCA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GTGGCACCAACGGGGTCAGCCTCCCAGCAGACTGCACGGGGGCAGTGCCCGCAGCATCCCCTGACACTGCTGCA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  TGGAGAAGTCCTTCCGAAGCTGCCGATGAGGTGTGTGCACTTGAGGAGAAAGAGCCCCAGAAAAATGAGTCCAG  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  CAATGCCTCTGAAGAGGAAGCCTGTGAGAAAAAAGACCCCGCCACACAGCAAGCCTTTGTATTTGGGCAGAACT  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  TGAGGGACAGAGTTAAGCTGATAAATGAGAGCGTGGACGAAGCCGACATGGAGAATGCTGGACACCCCAGCGCA  666
                                                           |||||||||||||||||||||||||||
Sbjct    1  -----------------------------------------------ATGGAGAATGCTGGACACCCCAGCGCA  27

Query  667  GACACGCCAACCGCAACGAACTATTTCCTCCAGTATATCAGTTCCAGTTTAGAGAACTCAACCAATAGTGCCGA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   28  GACACGCCAACCGCAACGAACTATTTCCTCCAGTATATCAGTTCCAGTTTAGAGAACTCAACCAATAGTGCCGA  101

Query  741  CGCCTCCAGCAACAAATTTGTATTTGGCCAGAACATGAGCGAGCGAGTTTTGAGCCCCCCAAAATTAAACGAGG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  102  CGCCTCCAGCAACAAATTTGTATTTGGCCAGAACATGAGCGAGCGAGTTTTGAGCCCCCCAAAATTAAACGAGG  175

Query  815  TCAGTTCAGATGCCAACAGGGAAAATGCAGCTGCCGAGTCAGGGTCTGAGTCCTCGTCCCAGGAGGCCACCCCT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  176  TCAGTTCAGATGCCAACAGGGAAAATGCAGCTGCCGAGTCAGGGTCTGAGTCCTCGTCCCAGGAGGCCACCCCT  249

Query  889  GAGAAAGAGTCCCTGGCTGAGTCGGCAGCCGCCTACACCAAGGCAACAGCGCGGAAGTGTTTGTTGGAAAAAGT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  250  GAGAAAGAGTCCCTGGCTGAGTCGGCAGCCGCCTACACCAAGGCAACAGCGCGGAAGTGTTTGTTGGAAAAAGT  323

Query  963  GGAAGTCATCACCGGGGAGGAGGCGGAGAGCAATGTGTTACAGATGCAGTGCAAGCTGTTTGTCTTTGACAAGA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  324  GGAAGTCATCACCGGGGAGGAGGCGGAGAGCAATGTGTTACAGATGCAGTGCAAGCTGTTTGTCTTTGACAAGA  397

Query 1037  CCTCACAGTCCT------------------GGCTTCTCCG-----------------CCACC--------CACA  1067
            ||||||||||||                  ||||.|||.|                 |||||        ||||
Sbjct  398  CCTCACAGTCCTGGGTGGAGAGAGGCCGGGGGCTGCTCAGACTCAATGACATGGCGTCCACCGATGACGGCACA  471

Query 1068  C----------------------------------CCT--------TCC----CACCCTGCTGTGGGGCCC---  1092
            |                                  |||        |||    ||||..||||| ||||||   
Sbjct  472  CTACAGTCCCGACTAGTGATGCGGACCCAGGGGAGCCTGCGACTGATCCTCAACACCAAGCTGT-GGGCCCAGA  544

Query 1093  -------------TGCCTTTGTGGGGAGCA---GC----CAGCCCTCTGCCCC--TGCCCAGGGC---------  1135
                         .|||...|.|..|||||   ||    |||||.|...|.||  .|.|||||||         
Sbjct  545  TGCAGATCGACAAGGCCAGCGAGAAGAGCATTCGCATCACAGCCATGGACACCGAGGACCAGGGCGTGAAGGTC  618

Query 1136  -TCC---------CCAACT--------ATAGG------------------------------CCTGGGACCCCC  1161
             |||         |||.||        |.|||                              |||||   |||.
Sbjct  619  TTCCTGATCTCGGCCAGCTCCAAGGACACAGGTCAGTTGTATGCAGCCCTGCACCACCGCATCCTGG---CCCT  689

Query 1162  GCCCA---GCTTGG--------------------------------------GGGGCTGC----TCGTACGAGT  1190
            ||.||   ||.|||                                      |||||.||    ||..||||| 
Sbjct  690  GCGCAGCCGCGTGGAGCAGGAGCAGGAGGCCAAGATGCCCGCGCCTGAGCCTGGGGCAGCCCCATCCAACGAG-  762

Query 1191  G-------------------------------------------------------------------------  1191
            |                                                                         
Sbjct  763  GAGGACGACAGCGACGATGACGATGTCCTGGCTCCTTCAGGGGCCACCGCAGCTGGTGCTGGTGACGAAGGGGA  836

Query 1192  ----------------------  1191
                                  
Sbjct  837  CGGGCAGACGACCGGGAGCACA  858