Nucleotide Global Alignment
Description
- Query:
- TRCN0000480078
- Subject:
- XM_011516914.1
- Aligned Length:
- 2533
- Identities:
- 1481
- Gaps:
- 1010
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCCCCTCGGCGGGTCCTCGCGCGCTGTTCAGACCCCAGCTCAGTGTGGAGGCTGCTGGCCCTGCCATCTG 74
Query 1 -------ATGTCATACGGATCCATCGCCCGTGGAGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGA 67
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TAAGAAGATGTCATACGGATCCATCGCCCGTGGAGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGA 148
Query 68 GACAAGGCTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCG 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GACAAGGCTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCG 222
Query 142 CCAGAGAGCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTAT 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCAGAGAGCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTAT 296
Query 216 TGTCCCAAGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCAC 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGTCCCAAGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCAC 370
Query 290 CCACCATTGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCC 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCACCATTGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCC 444
Query 364 AAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCT 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGAAGAGGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCT 518
Query 438 GCTGTTTGGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCG 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCTGTTTGGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCG 592
Query 512 TGAATGCGCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTG 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGAATGCGCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTG 666
Query 586 CGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGC 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CGGCGCAAGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGC 740
Query 660 TCTCACGCCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTGCCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGG 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCTCACGCCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTGCCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGG 814
Query 734 AGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTC 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTC 888
Query 808 CGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGACACGCAGGAGCT 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGACACGCAGGAGCT 962
Query 882 TCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGA 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGA 1036
Query 956 TGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCAGGAGCGTCCTCAGCTGGACCGGCTGAAA 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCAGGAGCGTCCTCAGCTGGACCGGCTGAAA 1110
Query 1030 ACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAAAAGTCCAGAGCGCTGCT 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAAAAGTCCAGAGCGCTGCT 1184
Query 1104 TCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGCCCCGTTTGCCGAGCTGGCTGATGATGAGAAGG 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGCCCCGTTTGCCGAGCTGGCTGATGATGAGAAGG 1258
Query 1178 TCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTG 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTG 1332
Query 1252 GAGGCCATCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAATCAGATCATCAA 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GAGGCCATCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAATCAGATCATCAA 1406
Query 1326 GGACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTG------ATAGTATTGAAGCCA---GCCTTGAG- 1389
||||||||||||||||||||||||||||||||||||||||| ..||.|...|||||| |||...||
Sbjct 1407 GGACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGGGTCCAGCAGCAGCAAAGCCATCTGCCAGCAGA 1480
Query 1390 GCTGCGTCCTC--GCATGCGGAGGCAGCCCGCCAGCT-----CCTGGCTGGAGC----CAGCC---------GG 1443
|||||..||.| ||..||.|.||||||||..|.||| ||.|||.|| || ||.|| ||
Sbjct 1481 GCTGCAGCCCCGAGCCGGCCGCGGCAGCCCTGCTGCTGGGTGCCGGGCCGG-GCTCCACACCCCTGCGGCCGGG 1553
Query 1444 CACCAACTCC-------AGAGACACAAGATCAA----------------------GTGCTGCTTC--------- 1479
|.||.||||| |||.||.||||..||| ||||||.|.|
Sbjct 1554 CCCCCACTCCCGCACCAAGACACGCAAGCCCAACTTCAGCCCCCAGGAGACGGAGGTGCTGGTGCAGAGGGTGC 1627
Query 1480 -------CTATCAGCTGGAG-TCACTGCCCTGCTTGTCATCATCATCATCATCGCCACCTCTGTCCGAAAG--- 1542
|||.|.||||..| ||...||.||||..|.|| ||| |||.|||||||
Sbjct 1628 GGCGCCACTACCCGCTGCTGTTCGGGGCGCTGCGGGGCA----------------CAC--CTGCCCGAAAGCAC 1683
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1684 CGCGTGTGGAGCCGCATCCTGCAGGCAGTGAACGCGCTGGGCTACTGCCGCCGCGACCTGGGGGACCTCAAGCA 1757
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1758 CAAGTGGCGGGACCTGCGAGGTGCTGTGCGCAAGAAGCTGGCGGAGGGCGGCCCCGCCCCCGGCCTCCTCCTCA 1831
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1832 CACCTGTGGAGCGCATGGTGGCAGAGACCTTTTCTGCCCACGGTCCCCAAGGCGAGGGCCAGACCACGGAGCCC 1905
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1906 CTGCCAACTGATGAGGAGGACGAGACCCCCAGCTGCTTGTGGCTGCCCCTGAGGTCCCTGGAAGGGCCCAGCCT 1979
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1980 GCCTGAACCTGACCCCCTGGACTTACGAGGAGTCTTCCACGCACCCACCTCCTCACCCTCCCCACCTGCTTCCC 2053
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2054 CAGCCTCCACCCCACCAGCAACCACACTCATGGGGGCCTTCCAGCCTTCCCCGCCCTCTTCGGCGCCAGCACCT 2127
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2128 CCCTTGCCCTCCAGGAGGACCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTGCTGGACTCCCA 2201
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2202 CCGGCAGCAGGGCGCCCTGCTGTCCTCCTGGGCCCAGCAGCAGAGCACACTCATGGCCCAGCAAAACCTGCTGC 2275
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2276 TGCAGCGGCTGGCCGAGCAGAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCTG 2349
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2350 GTGGAAGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCCTGCCAGTGGAGTGGCCCAGGG 2423
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2424 GCCTGCTGGAGGCTCCCAGGACAGCCCCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAGGGATGATCTTGA 2497
Query 1543 ----------------- 1542
Sbjct 2498 AGGTGGAGGAGGAGATA 2514
