Nucleotide Global Alignment
Description
- Query:
- TRCN0000480078
- Subject:
- XM_011516918.1
- Aligned Length:
- 2452
- Identities:
- 1331
- Gaps:
- 1079
Alignment
Query 1 ATGTCATACGGATCCATCGCCCGTGGAGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTCATACGGATCCATCGCCCGTGGAGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGG 74
Query 75 CTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGA 148
||||||||||||
Sbjct 75 CTGTCAGCCCCT-------------------------------------------------------------- 86
Query 149 GCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCA 222
Sbjct 87 -------------------------------------------------------------------------- 86
Query 223 AGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCAT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 87 --------------AGGGCCTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCAT 146
Query 297 TGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 147 TGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGA 220
Query 371 GGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 221 GGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTT 294
Query 445 GGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 295 GGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGC 368
Query 519 GCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 369 GCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCA 442
Query 593 AGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 443 AGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACG 516
Query 667 CCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTGCCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 517 CCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTGCCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCC 590
Query 741 CAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 591 CAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCA 664
Query 815 ACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGAC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 665 ACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGAC 738
Query 889 AGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 739 AGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGA 812
Query 963 GCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 813 GCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGC 886
Query 1037 TCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 TCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATG 960
Query 1111 GCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGCCCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 GCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGCCCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAA 1034
Query 1185 CGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 CGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCA 1108
Query 1259 TCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTG 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1109 TCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTG 1182
Query 1333 GCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTG------ATAGTATTGAAGCCA---GCCTTGAG-GCTGCGT 1396
|||||||||||||||||||||||||||||||||| ..||.|...|||||| |||...|| |||||..
Sbjct 1183 GCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGGGTCCAGCAGCAGCAAAGCCATCTGCCAGCAGAGCTGCAG 1256
Query 1397 CCTC--GCATGCGGAGGCAGCCCGCCAGCT-----CCTGGCTGGAGC----CAGCC---------GGCACCAAC 1450
||.| ||..||.|.||||||||..|.||| ||.|||.|| || ||.|| |||.||.||
Sbjct 1257 CCCCGAGCCGGCCGCGGCAGCCCTGCTGCTGGGTGCCGGGCCGG-GCTCCACACCCCTGCGGCCGGGCCCCCAC 1329
Query 1451 TCC-------AGAGACACAAGATCAA----------------------GTGCTGCTTC---------------- 1479
||| |||.||.||||..||| ||||||.|.|
Sbjct 1330 TCCCGCACCAAGACACGCAAGCCCAACTTCAGCCCCCAGGAGACGGAGGTGCTGGTGCAGAGGGTGCGGCGCCA 1403
Query 1480 CTATCAGCTGGAG-TCACTGCCCTGCTTGTCATCATCATCATCATCGCCACCTCTGTCCGAAAG---------- 1542
|||.|.||||..| ||...||.||||..|.|| ||| |||.|||||||
Sbjct 1404 CTACCCGCTGCTGTTCGGGGCGCTGCGGGGCA----------------CAC--CTGCCCGAAAGCACCGCGTGT 1459
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1460 GGAGCCGCATCCTGCAGGCAGTGAACGCGCTGGGCTACTGCCGCCGCGACCTGGGGGACCTCAAGCACAAGTGG 1533
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1534 CGGGACCTGCGAGGTGCTGTGCGCAAGAAGCTGGCGGAGGGCGGCCCCGCCCCCGGCCTCCTCCTCACACCTGT 1607
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1608 GGAGCGCATGGTGGCAGAGACCTTTTCTGCCCACGGTCCCCAAGGCGAGGGCCAGACCACGGAGCCCCTGCCAA 1681
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1682 CTGATGAGGAGGACGAGACCCCCAGCTGCTTGTGGCTGCCCCTGAGGTCCCTGGAAGGGCCCAGCCTGCCTGAA 1755
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1756 CCTGACCCCCTGGACTTACGAGGAGTCTTCCACGCACCCACCTCCTCACCCTCCCCACCTGCTTCCCCAGCCTC 1829
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1830 CACCCCACCAGCAACCACACTCATGGGGGCCTTCCAGCCTTCCCCGCCCTCTTCGGCGCCAGCACCTCCCTTGC 1903
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1904 CCTCCAGGAGGACCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTGCTGGACTCCCACCGGCAG 1977
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1978 CAGGGCGCCCTGCTGTCCTCCTGGGCCCAGCAGCAGAGCACACTCATGGCCCAGCAAAACCTGCTGCTGCAGCG 2051
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2052 GCTGGCCGAGCAGAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCTGGTGGAAG 2125
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2126 CACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCCTGCCAGTGGAGTGGCCCAGGGGCCTGCT 2199
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 2200 GGAGGCTCCCAGGACAGCCCCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGGA 2273
Query 1543 ---------- 1542
Sbjct 2274 GGAGGAGATA 2283
