Nucleotide Global Alignment
Description
- Query:
- TRCN0000480078
- Subject:
- XM_011516920.1
- Aligned Length:
- 2471
- Identities:
- 794
- Gaps:
- 1624
Alignment
Query 1 ATGTCATACGGATCCATCGCCCGTGGAGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCAT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCT--GGCTCTCA 664
|.|.|.| ||.|| ||
Sbjct 1 ---------------------------------------------------------ATGTCATACGGATC-CA 16
Query 665 -CGCCCGTGGAGCAGGTGGTGGCC----AAGACCTTCTCTTGCCAGGCCCT-------GCCCTCCGAG----GG 722
|||||||||| ||||||| .||.|.| |||||| |.|||.|||| ||
Sbjct 17 TCGCCCGTGGA------GGTGGCCTGGGGAGCCGT----------GGCCCTTTCGGGGGACCTTCGAGACAAGG 74
Query 723 CT-TCAGTCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCG 795
|| ||| ||||..||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTGTCA----------GCCCCTAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCG 138
Query 796 GCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGA 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 139 GCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGA 212
Query 870 CACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCT 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 213 CACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCT 286
Query 944 CCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCAGGAGCGTCCTCAGCTG 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 287 CCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCAGGAGCGTCCTCAGCTG 360
Query 1018 GACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAAAAGTC 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAAAAGTC 434
Query 1092 CAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGCCCCGTTTGCCGAGCTGGCTG 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 435 CAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGCCCCGTTTGCCGAGCTGGCTG 508
Query 1166 ATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACT 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 509 ATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACT 582
Query 1240 GAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAA 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 583 GAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAA 656
Query 1314 TCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTG------ATAGTATTGAAGCCA 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||| ..||.|...||||||
Sbjct 657 TCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGGGTCCAGCAGCAGCAAAGCCA 730
Query 1382 ---GCCTTGAG-GCTGCGTCCTC--GCATGCGGAGGCAGCCCGCCAGCT-----CCTGGCTGGAGC----CAGC 1440
|||...|| |||||..||.| ||..||.|.||||||||..|.||| ||.|||.|| || ||.|
Sbjct 731 TCTGCCAGCAGAGCTGCAGCCCCGAGCCGGCCGCGGCAGCCCTGCTGCTGGGTGCCGGGCCGG-GCTCCACACC 803
Query 1441 C---------GGCACCAACTCC-------AGAGACACAAGATCAA----------------------GTGCTGC 1476
| |||.||.||||| |||.||.||||..||| ||||||.
Sbjct 804 CCTGCGGCCGGGCCCCCACTCCCGCACCAAGACACGCAAGCCCAACTTCAGCCCCCAGGAGACGGAGGTGCTGG 877
Query 1477 TTC----------------CTATCAGCTGGAG-TCACTGCCCTGCTTGTCATCATCATCATCATCGCCACCTCT 1533
|.| |||.|.||||..| ||...||.||||..|.|| ||| ||
Sbjct 878 TGCAGAGGGTGCGGCGCCACTACCCGCTGCTGTTCGGGGCGCTGCGGGGCA----------------CAC--CT 933
Query 1534 GTCCGAAAG----------------------------------------------------------------- 1542
|.|||||||
Sbjct 934 GCCCGAAAGCACCGCGTGTGGAGCCGCATCCTGCAGGCAGTGAACGCGCTGGGCTACTGCCGCCGCGACCTGGG 1007
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1008 GGACCTCAAGCACAAGTGGCGGGACCTGCGAGGTGCTGTGCGCAAGAAGCTGGCGGAGGGCGGCCCCGCCCCCG 1081
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1082 GCCTCCTCCTCACACCTGTGGAGCGCATGGTGGCAGAGACCTTTTCTGCCCACGGTCCCCAAGGCGAGGGCCAG 1155
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1156 ACCACGGAGCCCCTGCCAACTGATGAGGAGGACGAGACCCCCAGCTGCTTGTGGCTGCCCCTGAGGTCCCTGGA 1229
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1230 AGGGCCCAGCCTGCCTGAACCTGACCCCCTGGACTTACGAGGAGTCTTCCACGCACCCACCTCCTCACCCTCCC 1303
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1304 CACCTGCTTCCCCAGCCTCCACCCCACCAGCAACCACACTCATGGGGGCCTTCCAGCCTTCCCCGCCCTCTTCG 1377
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1378 GCGCCAGCACCTCCCTTGCCCTCCAGGAGGACCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCT 1451
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1452 GCTGGACTCCCACCGGCAGCAGGGCGCCCTGCTGTCCTCCTGGGCCCAGCAGCAGAGCACACTCATGGCCCAGC 1525
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1526 AAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACC 1599
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1600 CTCGAGAGGCTGGTGGAAGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCCTGCCAGTGG 1673
Query 1543 -------------------------------------------------------------------------- 1542
Sbjct 1674 AGTGGCCCAGGGGCCTGCTGGAGGCTCCCAGGACAGCCCCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAG 1747
Query 1543 ----------------------------- 1542
Sbjct 1748 GGATGATCTTGAAGGTGGAGGAGGAGATA 1776
